BLASTX nr result

ID: Rehmannia29_contig00034925 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00034925
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011072583.1| auxin-binding protein ABP19a [Sesamum indicum]     43   7e-08

>ref|XP_011072583.1| auxin-binding protein ABP19a [Sesamum indicum]
          Length = 221

 Score = 42.7 bits (99), Expect(3) = 7e-08
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = +2

Query: 317 KKMLKSIFLTFSLLIFTCNASVQDFCV 397
           + MLK+I L+F LL+ TCNA+VQDFCV
Sbjct: 11  ENMLKTILLSFFLLVITCNAAVQDFCV 37



 Score = 33.1 bits (74), Expect(3) = 7e-08
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +1

Query: 439 ITVSDFVFTGFRSAGN 486
           +TV+DFVFTGFR+AGN
Sbjct: 57  VTVADFVFTGFRAAGN 72



 Score = 27.7 bits (60), Expect(3) = 7e-08
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 405 GPGGYSCKSPAN 440
           GP GYSCKSPA+
Sbjct: 45  GPAGYSCKSPAD 56


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