BLASTX nr result
ID: Rehmannia29_contig00034665
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00034665
(452 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN20929.1| hypothetical protein CDL12_06380 [Handroanthus im... 110 1e-25
ref|XP_020552186.1| putative pentatricopeptide repeat-containing... 103 7e-23
ref|XP_012835207.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 99 4e-21
gb|KZV51872.1| pentatricopeptide repeat-containing protein [Dorc... 95 7e-20
ref|XP_022890708.1| putative pentatricopeptide repeat-containing... 92 1e-18
ref|XP_016474884.1| PREDICTED: putative pentatricopeptide repeat... 77 2e-13
ref|XP_009789466.1| PREDICTED: putative pentatricopeptide repeat... 77 2e-13
ref|XP_019155806.1| PREDICTED: putative pentatricopeptide repeat... 75 7e-13
ref|XP_021625231.1| putative pentatricopeptide repeat-containing... 75 1e-12
ref|XP_024173992.1| putative pentatricopeptide repeat-containing... 74 2e-12
gb|PRQ20629.1| putative tetratricopeptide-like helical domain-co... 74 2e-12
ref|XP_007132128.1| hypothetical protein PHAVU_011G069000g [Phas... 74 3e-12
ref|XP_021676196.1| putative pentatricopeptide repeat-containing... 74 3e-12
ref|XP_004295891.1| PREDICTED: putative pentatricopeptide repeat... 73 3e-12
ref|XP_021279735.1| putative pentatricopeptide repeat-containing... 73 3e-12
ref|XP_008347851.1| PREDICTED: putative pentatricopeptide repeat... 72 6e-12
ref|XP_011025584.1| PREDICTED: putative pentatricopeptide repeat... 72 6e-12
ref|XP_009379132.2| PREDICTED: putative pentatricopeptide repeat... 72 7e-12
ref|XP_004495883.1| PREDICTED: putative pentatricopeptide repeat... 72 9e-12
ref|XP_002310039.2| hypothetical protein POPTR_0007s06780g [Popu... 72 1e-11
>gb|PIN20929.1| hypothetical protein CDL12_06380 [Handroanthus impetiginosus]
Length = 506
Score = 110 bits (276), Expect = 1e-25
Identities = 54/62 (87%), Positives = 60/62 (96%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDFI 181
VEKGQKPS VSFRRIKVLMELANKHEA+SNLSEKM++FGS+IQM KSYVDEL++PISDFI
Sbjct: 445 VEKGQKPSNVSFRRIKVLMELANKHEALSNLSEKMSAFGSSIQMSKSYVDELERPISDFI 504
Query: 182 SC 187
SC
Sbjct: 505 SC 506
>ref|XP_020552186.1| putative pentatricopeptide repeat-containing protein At1g02420
[Sesamum indicum]
Length = 511
Score = 103 bits (257), Expect = 7e-23
Identities = 50/61 (81%), Positives = 59/61 (96%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDFI 181
V+KGQKPS+VSFRRIKVLMELANKHEA++NLSEKM++FGSAIQM K+ VDEL++PISDFI
Sbjct: 450 VDKGQKPSHVSFRRIKVLMELANKHEALTNLSEKMSAFGSAIQMNKNNVDELERPISDFI 509
Query: 182 S 184
S
Sbjct: 510 S 510
>ref|XP_012835207.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g02420 [Erythranthe
guttata]
Length = 517
Score = 98.6 bits (244), Expect = 4e-21
Identities = 47/60 (78%), Positives = 56/60 (93%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDFI 181
VEKGQKPS+VSFRRIKVLMELAN++EA+SNLSEKM SFGS Q+ +SYVDELD+P+SDF+
Sbjct: 453 VEKGQKPSHVSFRRIKVLMELANRNEALSNLSEKMNSFGSVNQISRSYVDELDRPVSDFV 512
>gb|KZV51872.1| pentatricopeptide repeat-containing protein [Dorcoceras
hygrometricum]
Length = 431
Score = 94.7 bits (234), Expect = 7e-20
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDF 178
+EKGQKPSYVSFRRIKVLMELANK EA+SNLSEKM++FGS + + +S VDEL++P+SDF
Sbjct: 370 MEKGQKPSYVSFRRIKVLMELANKEEALSNLSEKMSAFGSTVHLGRSVVDELERPVSDF 428
>ref|XP_022890708.1| putative pentatricopeptide repeat-containing protein At1g02420
[Olea europaea var. sylvestris]
ref|XP_022890709.1| putative pentatricopeptide repeat-containing protein At1g02420
[Olea europaea var. sylvestris]
ref|XP_022890710.1| putative pentatricopeptide repeat-containing protein At1g02420
[Olea europaea var. sylvestris]
ref|XP_022890711.1| putative pentatricopeptide repeat-containing protein At1g02420
[Olea europaea var. sylvestris]
ref|XP_022890712.1| putative pentatricopeptide repeat-containing protein At1g02420
[Olea europaea var. sylvestris]
ref|XP_022890713.1| putative pentatricopeptide repeat-containing protein At1g02420
[Olea europaea var. sylvestris]
ref|XP_022890714.1| putative pentatricopeptide repeat-containing protein At1g02420
[Olea europaea var. sylvestris]
Length = 534
Score = 91.7 bits (226), Expect = 1e-18
Identities = 44/61 (72%), Positives = 55/61 (90%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDFI 181
V+KGQKPS VSF+RIKVLMELANKHEA+ NL EKM++FGS++Q+R+S EL++PISDFI
Sbjct: 473 VDKGQKPSNVSFKRIKVLMELANKHEALQNLFEKMSAFGSSLQLRRSEGGELERPISDFI 532
Query: 182 S 184
S
Sbjct: 533 S 533
>ref|XP_016474884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Nicotiana tabacum]
ref|XP_016474885.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Nicotiana tabacum]
Length = 506
Score = 77.0 bits (188), Expect = 2e-13
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDFI 181
V+KGQKPS VSFRRIKVLMELANK EA+ LSEKMASFGS+ Q+ + E ++ SDF
Sbjct: 445 VDKGQKPSNVSFRRIKVLMELANKQEALKVLSEKMASFGSSTQLIQDDKAEYEQSSSDFA 504
Query: 182 SC 187
+C
Sbjct: 505 TC 506
>ref|XP_009789466.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Nicotiana sylvestris]
ref|XP_009789467.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Nicotiana sylvestris]
Length = 506
Score = 77.0 bits (188), Expect = 2e-13
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDFI 181
V+KGQKPS VSFRRIKVLMELANK EA+ LSEKMASFGS+ Q+ + E ++ SDF
Sbjct: 445 VDKGQKPSNVSFRRIKVLMELANKQEALKVLSEKMASFGSSTQLIQDDKAEYEQSSSDFA 504
Query: 182 SC 187
+C
Sbjct: 505 TC 506
>ref|XP_019155806.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Ipomoea nil]
Length = 530
Score = 75.1 bits (183), Expect = 7e-13
Identities = 36/58 (62%), Positives = 46/58 (79%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISD 175
+E G KPS+V+FRR+KVLMELANKHEAI NLS+KMA+FGSAI++R + + SD
Sbjct: 464 LEAGHKPSFVAFRRVKVLMELANKHEAIQNLSDKMAAFGSAIKLRLESETKFETSASD 521
>ref|XP_021625231.1| putative pentatricopeptide repeat-containing protein At1g02420
[Manihot esculenta]
gb|OAY39730.1| hypothetical protein MANES_10G117700 [Manihot esculenta]
Length = 515
Score = 74.7 bits (182), Expect = 1e-12
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRK 139
+EKGQKPS V+FRRIKVLMELANKH+A+ NLSEKMA FGS+IQ+ K
Sbjct: 456 IEKGQKPSNVAFRRIKVLMELANKHDALQNLSEKMAIFGSSIQVPK 501
>ref|XP_024173992.1| putative pentatricopeptide repeat-containing protein At1g02420
[Rosa chinensis]
ref|XP_024173993.1| putative pentatricopeptide repeat-containing protein At1g02420
[Rosa chinensis]
ref|XP_024173994.1| putative pentatricopeptide repeat-containing protein At1g02420
[Rosa chinensis]
ref|XP_024173995.1| putative pentatricopeptide repeat-containing protein At1g02420
[Rosa chinensis]
ref|XP_024173996.1| putative pentatricopeptide repeat-containing protein At1g02420
[Rosa chinensis]
Length = 507
Score = 73.9 bits (180), Expect = 2e-12
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISD 175
VEKG KPS VSFRRIKVLMELANKHEA+ NL+EKMA FGS+I + +S + P S+
Sbjct: 447 VEKGHKPSNVSFRRIKVLMELANKHEALKNLTEKMALFGSSIHLPESMDRSTEVPRSE 504
>gb|PRQ20629.1| putative tetratricopeptide-like helical domain-containing protein
[Rosa chinensis]
Length = 579
Score = 73.9 bits (180), Expect = 2e-12
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISD 175
VEKG KPS VSFRRIKVLMELANKHEA+ NL+EKMA FGS+I + +S + P S+
Sbjct: 519 VEKGHKPSNVSFRRIKVLMELANKHEALKNLTEKMALFGSSIHLPESMDRSTEVPRSE 576
>ref|XP_007132128.1| hypothetical protein PHAVU_011G069000g [Phaseolus vulgaris]
gb|ESW04122.1| hypothetical protein PHAVU_011G069000g [Phaseolus vulgaris]
Length = 500
Score = 73.6 bits (179), Expect = 3e-12
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDF 178
+EKGQKPS VSFRRIKVLMELAN+HEA+ +L++KM+ FG +Q+ +S V + + P S F
Sbjct: 439 IEKGQKPSNVSFRRIKVLMELANRHEALESLTQKMSIFGRPLQLHQSSVSQTETPDSLF 497
>ref|XP_021676196.1| putative pentatricopeptide repeat-containing protein At1g02420
[Hevea brasiliensis]
Length = 505
Score = 73.6 bits (179), Expect = 3e-12
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 8/60 (13%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQM--------RKSYVDEL 157
+EKG KPS V+FRRIKVLMELANKH+A+ NLSEK+A FGS+IQ+ R SY+D L
Sbjct: 444 IEKGHKPSNVAFRRIKVLMELANKHDALQNLSEKIAIFGSSIQVPREEEHLNRTSYIDSL 503
>ref|XP_004295891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Fragaria vesca subsp. vesca]
ref|XP_011461178.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Fragaria vesca subsp. vesca]
ref|XP_011461179.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Fragaria vesca subsp. vesca]
Length = 504
Score = 73.2 bits (178), Expect = 3e-12
Identities = 38/61 (62%), Positives = 46/61 (75%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKSYVDELDKPISDFI 181
VEKG KPS VSFRRIKVLMELANKHEA+ NL+EKMA FGS+I + +S P S+ +
Sbjct: 444 VEKGHKPSNVSFRRIKVLMELANKHEALKNLTEKMALFGSSIHLPESMDRSTVVPCSEAL 503
Query: 182 S 184
+
Sbjct: 504 A 504
>ref|XP_021279735.1| putative pentatricopeptide repeat-containing protein At1g02420
[Herrania umbratica]
Length = 511
Score = 73.2 bits (178), Expect = 3e-12
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQM 133
+EKG KPS VSFRRIKVLMELANKHEA+ NL EKMA FGS+IQ+
Sbjct: 444 IEKGHKPSNVSFRRIKVLMELANKHEAVKNLKEKMAIFGSSIQL 487
>ref|XP_008347851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Malus domestica]
ref|XP_017181183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Malus domestica]
ref|XP_017181184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Malus domestica]
Length = 504
Score = 72.4 bits (176), Expect = 6e-12
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQM 133
VEKGQKPS VSFRRIKVLMELANKHEA+ NL+EKMA FG++I +
Sbjct: 443 VEKGQKPSSVSFRRIKVLMELANKHEALKNLTEKMAVFGASIHL 486
>ref|XP_011025584.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Populus euphratica]
ref|XP_011025585.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Populus euphratica]
Length = 510
Score = 72.4 bits (176), Expect = 6e-12
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKS 142
VEKG KPS VSFRRIKVLMELANKH+AI NLSEKMA FGS+I+ +S
Sbjct: 451 VEKGHKPSNVSFRRIKVLMELANKHDAIRNLSEKMAIFGSSIRAPES 497
>ref|XP_009379132.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Pyrus x bretschneideri]
ref|XP_009379146.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Pyrus x bretschneideri]
Length = 549
Score = 72.4 bits (176), Expect = 7e-12
Identities = 35/44 (79%), Positives = 40/44 (90%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQM 133
VEKGQKPS VSFRRIKVLMELANKHEA+ NL+EKMA FG++I +
Sbjct: 488 VEKGQKPSSVSFRRIKVLMELANKHEALKNLTEKMAVFGASIHL 531
>ref|XP_004495883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Cicer arietinum]
ref|XP_012569929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420 [Cicer arietinum]
Length = 502
Score = 72.0 bits (175), Expect = 9e-12
Identities = 34/47 (72%), Positives = 41/47 (87%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQMRKS 142
VEKGQKPS VSFRRIKVLMELAN+HEAI NL++KM FG +Q+R++
Sbjct: 439 VEKGQKPSNVSFRRIKVLMELANRHEAIQNLTQKMGVFGQTLQVREN 485
>ref|XP_002310039.2| hypothetical protein POPTR_0007s06780g [Populus trichocarpa]
Length = 509
Score = 71.6 bits (174), Expect = 1e-11
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +2
Query: 2 VEKGQKPSYVSFRRIKVLMELANKHEAISNLSEKMASFGSAIQ 130
VEKG KPS VSFRRIKVLMELANKH+AI NLSEKMA FGS+I+
Sbjct: 450 VEKGHKPSNVSFRRIKVLMELANKHDAIRNLSEKMAIFGSSIR 492