BLASTX nr result
ID: Rehmannia29_contig00034656
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00034656
(435 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011072200.1| pentatricopeptide repeat-containing protein ... 171 4e-47
ref|XP_012855696.1| PREDICTED: pentatricopeptide repeat-containi... 132 5e-33
gb|KZV41837.1| pentatricopeptide repeat-containing protein [Dorc... 125 1e-30
gb|EYU22278.1| hypothetical protein MIMGU_mgv1a025105mg, partial... 107 2e-24
ref|XP_022841620.1| pentatricopeptide repeat-containing protein ... 107 3e-24
ref|XP_023758182.1| pentatricopeptide repeat-containing protein ... 81 5e-15
ref|XP_021684883.1| pentatricopeptide repeat-containing protein ... 81 6e-15
ref|XP_021684879.1| pentatricopeptide repeat-containing protein ... 81 6e-15
gb|OAY46368.1| hypothetical protein MANES_07G139100 [Manihot esc... 80 2e-14
ref|XP_019230471.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-14
ref|XP_021617680.1| pentatricopeptide repeat-containing protein ... 80 2e-14
ref|XP_009597127.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-14
gb|PHT42319.1| hypothetical protein CQW23_16344 [Capsicum baccatum] 79 4e-14
ref|XP_006343679.2| PREDICTED: pentatricopeptide repeat-containi... 79 4e-14
ref|XP_015081124.1| PREDICTED: pentatricopeptide repeat-containi... 78 7e-14
ref|XP_004242982.2| PREDICTED: pentatricopeptide repeat-containi... 78 7e-14
ref|XP_016433153.1| PREDICTED: pentatricopeptide repeat-containi... 76 8e-14
gb|PHU11198.1| hypothetical protein BC332_18128 [Capsicum chinense] 77 1e-13
ref|XP_020682329.1| pentatricopeptide repeat-containing protein ... 77 1e-13
ref|XP_002520828.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-13
>ref|XP_011072200.1| pentatricopeptide repeat-containing protein At4g02750-like [Sesamum
indicum]
Length = 685
Score = 171 bits (433), Expect = 4e-47
Identities = 87/138 (63%), Positives = 108/138 (78%), Gaps = 1/138 (0%)
Frame = +3
Query: 24 MIGGRGSWKLRITAKN-IVVRRVCIYFLCHLKQQTPHALYTTTSTAILNSRRRIASGSKF 200
MIGGR SWKL +T +N I V CI FLC+ ++T LYTT++TA NS+ I S S+F
Sbjct: 1 MIGGRSSWKLHLTVQNNIPVLWTCISFLCNENRRTLQELYTTSATATSNSKSSILSRSRF 60
Query: 201 TSEFAKQDDSISSTNFGSTYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIY 380
+S K+DDS++ +F STYDYNVRMGELGRRG V+AA +LF+ MPERDKVSYASMISIY
Sbjct: 61 SSLSEKKDDSVACLSFSSTYDYNVRMGELGRRGNVSAACKLFESMPERDKVSYASMISIY 120
Query: 381 LKHDEFHKAERLFYEIPE 434
LK++EF KAERL+YEIP+
Sbjct: 121 LKNEEFQKAERLYYEIPD 138
>ref|XP_012855696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Erythranthe guttata]
Length = 676
Score = 132 bits (332), Expect = 5e-33
Identities = 76/136 (55%), Positives = 89/136 (65%)
Frame = +3
Query: 24 MIGGRGSWKLRITAKNIVVRRVCIYFLCHLKQQTPHALYTTTSTAILNSRRRIASGSKFT 203
MIGG + + TA+ I V R CI + KQ+ H T +TA NSR I S + +
Sbjct: 1 MIGGGTTRTVLKTAQKIFVARTCISLSLNGKQRNSHDFCTCAATASSNSRSSIVSRGEIS 60
Query: 204 SEFAKQDDSISSTNFGSTYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYL 383
+ ++SS S YDYNVRMGE+GR G V AAR+LFDDMPERDKVSYASMISIYL
Sbjct: 61 --YVSTTRTVSS----SIYDYNVRMGEVGRGGNVAAARKLFDDMPERDKVSYASMISIYL 114
Query: 384 KHDEFHKAERLFYEIP 431
KHDEFHKAERLF E P
Sbjct: 115 KHDEFHKAERLFCETP 130
>gb|KZV41837.1| pentatricopeptide repeat-containing protein [Dorcoceras
hygrometricum]
Length = 691
Score = 125 bits (314), Expect = 1e-30
Identities = 68/136 (50%), Positives = 87/136 (63%)
Frame = +3
Query: 24 MIGGRGSWKLRITAKNIVVRRVCIYFLCHLKQQTPHALYTTTSTAILNSRRRIASGSKFT 203
M GR S L T +N C ++++P A YTT++T + + + R S +F
Sbjct: 7 MTAGRSSKILEKTIRNFQEFWEYSSISCCRERRSPFAHYTTSATKVPSLKVRSLSSPEFY 66
Query: 204 SEFAKQDDSISSTNFGSTYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYL 383
S+F D +F STYDYNVRMGELGR+GK++AAR LFD+MP RD VSYASMI IY+
Sbjct: 67 SDFDGNFDLAPFLSFPSTYDYNVRMGELGRQGKLSAARSLFDEMPRRDSVSYASMIGIYV 126
Query: 384 KHDEFHKAERLFYEIP 431
KH EFHKAE +F EIP
Sbjct: 127 KHGEFHKAEEVFREIP 142
>gb|EYU22278.1| hypothetical protein MIMGU_mgv1a025105mg, partial [Erythranthe
guttata]
Length = 648
Score = 107 bits (268), Expect = 2e-24
Identities = 52/60 (86%), Positives = 54/60 (90%)
Frame = +3
Query: 252 STYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIP 431
S YDYNVRMGE+GR G V AAR+LFDDMPERDKVSYASMISIYLKHDEFHKAERLF E P
Sbjct: 43 SIYDYNVRMGEVGRGGNVAAARKLFDDMPERDKVSYASMISIYLKHDEFHKAERLFCETP 102
>ref|XP_022841620.1| pentatricopeptide repeat-containing protein At1g09410,
mitochondrial-like [Olea europaea var. sylvestris]
Length = 682
Score = 107 bits (267), Expect = 3e-24
Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Frame = +3
Query: 48 KLRITAKNIVVRRVCIYFL-CHLKQQTPHALYTTTSTAILNSRRRIASGSKFTSEFAKQD 224
K+ KN+++ R C++FL C + H LYTT +T N+ + ++ + +FA +D
Sbjct: 8 KINRAVKNVLLLRHCVFFLRCPEQYIYHHVLYTTATTTSYNNP---SLRNEISFKFANRD 64
Query: 225 DSISSTNFGSTYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHK 404
S + +N TY NVRM ELGR GKVN A +LF +M ERD VSY+SMI+IYLK+++ HK
Sbjct: 65 YSSTFSNSNLTYYCNVRMSELGRLGKVNEAHKLFGEMTERDAVSYSSMIAIYLKNNDLHK 124
Query: 405 AERLFYEIPE 434
AE LF E+P+
Sbjct: 125 AEGLFREMPD 134
>ref|XP_023758182.1| pentatricopeptide repeat-containing protein At4g02750-like [Lactuca
sativa]
gb|PLY99927.1| hypothetical protein LSAT_7X12781 [Lactuca sativa]
Length = 669
Score = 81.3 bits (199), Expect = 5e-15
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +3
Query: 258 YDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIPE 434
YDYN+R+ ELGR GKV+ AR+LFD+MP+RD VSY SMI++Y+K+++ AE LF+ IPE
Sbjct: 68 YDYNIRLTELGRFGKVHDARKLFDEMPQRDIVSYVSMITVYIKNNDLFSAEALFHTIPE 126
>ref|XP_021684883.1| pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X5 [Hevea brasiliensis]
Length = 657
Score = 80.9 bits (198), Expect = 6e-15
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +3
Query: 255 TYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIPE 434
TY+ N R+ LGR G VN AR+LFD+MP RD VSYASMI++YLK+++ KAERLF+ +PE
Sbjct: 62 TYECNTRISILGRHGNVNEARKLFDEMPHRDTVSYASMITVYLKNNDLPKAERLFWAMPE 121
>ref|XP_021684879.1| pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X1 [Hevea brasiliensis]
ref|XP_021684880.1| pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X2 [Hevea brasiliensis]
ref|XP_021684881.1| pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X3 [Hevea brasiliensis]
ref|XP_021684882.1| pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X4 [Hevea brasiliensis]
Length = 670
Score = 80.9 bits (198), Expect = 6e-15
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +3
Query: 255 TYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIPE 434
TY+ N R+ LGR G VN AR+LFD+MP RD VSYASMI++YLK+++ KAERLF+ +PE
Sbjct: 62 TYECNTRISILGRHGNVNEARKLFDEMPHRDTVSYASMITVYLKNNDLPKAERLFWAMPE 121
>gb|OAY46368.1| hypothetical protein MANES_07G139100 [Manihot esculenta]
Length = 648
Score = 79.7 bits (195), Expect = 2e-14
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +3
Query: 258 YDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIPE 434
Y+ NV++ LGR G VN AR+LFD+MP RD VSYASMI++YLK+++F +AERLF +PE
Sbjct: 66 YECNVKISNLGRHGNVNQARKLFDEMPHRDIVSYASMITVYLKNNDFSQAERLFLTMPE 124
>ref|XP_019230471.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Nicotiana attenuata]
Length = 658
Score = 79.7 bits (195), Expect = 2e-14
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = +3
Query: 231 ISSTNFGSTYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAE 410
+ ST S + N + LG +GKV AR+LFD+MP+RD VSYASMI++YLKH + KAE
Sbjct: 57 LESTTRQSIFSSNKMIMTLGHQGKVKEARQLFDEMPQRDVVSYASMITVYLKHKDLPKAE 116
Query: 411 RLFYEIPE 434
RLFY +PE
Sbjct: 117 RLFYSMPE 124
>ref|XP_021617680.1| pentatricopeptide repeat-containing protein At1g09410-like [Manihot
esculenta]
gb|OAY46369.1| hypothetical protein MANES_07G139100 [Manihot esculenta]
Length = 673
Score = 79.7 bits (195), Expect = 2e-14
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +3
Query: 258 YDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIPE 434
Y+ NV++ LGR G VN AR+LFD+MP RD VSYASMI++YLK+++F +AERLF +PE
Sbjct: 66 YECNVKISNLGRHGNVNQARKLFDEMPHRDIVSYASMITVYLKNNDFSQAERLFLTMPE 124
>ref|XP_009597127.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Nicotiana tomentosiformis]
Length = 658
Score = 79.3 bits (194), Expect = 2e-14
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = +3
Query: 231 ISSTNFGSTYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAE 410
+ ST S +N + LGR+GKV AR++FD+MP RD VSYASMI++YLKH + KAE
Sbjct: 57 LESTTRQSICSFNKMIMTLGRQGKVKEARKVFDEMPRRDVVSYASMITVYLKHKDLPKAE 116
Query: 411 RLFYEIPE 434
RLFY +PE
Sbjct: 117 RLFYSMPE 124
>gb|PHT42319.1| hypothetical protein CQW23_16344 [Capsicum baccatum]
Length = 638
Score = 78.6 bits (192), Expect = 4e-14
Identities = 37/61 (60%), Positives = 48/61 (78%)
Frame = +3
Query: 252 STYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIP 431
S + N ++ LGR+GKV AR+LFD+MP+RD VSYASMI++YLKH E +AERLFY +P
Sbjct: 43 SIFSCNKQIMSLGRQGKVVEARKLFDEMPDRDVVSYASMITVYLKHKELPEAERLFYSMP 102
Query: 432 E 434
E
Sbjct: 103 E 103
>ref|XP_006343679.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Solanum tuberosum]
Length = 656
Score = 78.6 bits (192), Expect = 4e-14
Identities = 37/61 (60%), Positives = 47/61 (77%)
Frame = +3
Query: 252 STYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIP 431
S + N + LGR+GKV AR+LFD+MP+RD VS+ASMI+IYLKH + KAERLFY +P
Sbjct: 61 SIFSCNKMITNLGRQGKVKEARQLFDEMPQRDVVSHASMITIYLKHKDLPKAERLFYSMP 120
Query: 432 E 434
E
Sbjct: 121 E 121
>ref|XP_015081124.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Solanum pennellii]
Length = 656
Score = 77.8 bits (190), Expect = 7e-14
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +3
Query: 252 STYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIP 431
S + N + LGR+GKV AR+LFD+MP+RD VS+ASMI++YLKH + KAERLFY +P
Sbjct: 61 SIFSCNKMIMNLGRQGKVKEARQLFDEMPQRDVVSHASMITVYLKHKDIPKAERLFYSMP 120
Query: 432 E 434
E
Sbjct: 121 E 121
>ref|XP_004242982.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Solanum lycopersicum]
Length = 656
Score = 77.8 bits (190), Expect = 7e-14
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +3
Query: 252 STYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIP 431
S + N + LGR+GKV AR+LFD+MP+RD VS+ASMI++YLKH + KAERLFY +P
Sbjct: 61 SIFSCNKMIMNLGRQGKVKEARQLFDEMPQRDVVSHASMITVYLKHKDLPKAERLFYSMP 120
Query: 432 E 434
E
Sbjct: 121 E 121
>ref|XP_016433153.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like, partial [Nicotiana tabacum]
Length = 272
Score = 76.3 bits (186), Expect = 8e-14
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +3
Query: 285 LGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIPE 434
LGR+GKV AR++FD+MP+RD VSYASMI++YLKH + KAERLFY +PE
Sbjct: 3 LGRQGKVKEARKVFDEMPQRDVVSYASMITVYLKHKDLPKAERLFYSMPE 52
>gb|PHU11198.1| hypothetical protein BC332_18128 [Capsicum chinense]
Length = 638
Score = 77.4 bits (189), Expect = 1e-13
Identities = 37/61 (60%), Positives = 47/61 (77%)
Frame = +3
Query: 252 STYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIP 431
S + N + LGR+GKV AR+LFD+MP+RD VSYASMI++YLKH E +AERLFY +P
Sbjct: 43 SIFSCNKLIMSLGRQGKVVEARKLFDEMPDRDVVSYASMITVYLKHKELPEAERLFYSMP 102
Query: 432 E 434
E
Sbjct: 103 E 103
>ref|XP_020682329.1| pentatricopeptide repeat-containing protein At4g02750-like
[Dendrobium catenatum]
gb|PKU76482.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 665
Score = 77.4 bits (189), Expect = 1e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 258 YDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIPE 434
Y N+R+ LGRRG +NAAR LFD MP+RD V+YASMI++YLK+ +F +AE LF +IPE
Sbjct: 63 YGCNLRISSLGRRGDINAARVLFDQMPQRDVVTYASMINLYLKNGDFPQAEALFKKIPE 121
>ref|XP_002520828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09410
[Ricinus communis]
gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 76.6 bits (187), Expect = 2e-13
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +3
Query: 255 TYDYNVRMGELGRRGKVNAARELFDDMPERDKVSYASMISIYLKHDEFHKAERLFYEIPE 434
TY+ NV++ LG RGKV AR++FD+MP RD VSYASMI++YLK+ + +AE LF EIPE
Sbjct: 51 TYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPE 110