BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00034405
         (599 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]   123   4e-54
emb|CAN78042.1| hypothetical protein VITISV_041808 [Vitis vinifera]   130   2e-51
gb|PKI44367.1| hypothetical protein CRG98_035241, partial [Punic...   122   1e-50
ref|XP_010531643.1| PREDICTED: uncharacterized protein LOC104807...   131   2e-48
dbj|GAU28329.1| hypothetical protein TSUD_256570 [Trifolium subt...   116   4e-48
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   112   6e-47
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   117   7e-45
gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Ar...   110   2e-44
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...   104   7e-44
gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]       118   6e-43
gb|PNY14327.1| retrovirus-related Pol polyprotein from transposo...   109   6e-43
dbj|GAU18207.1| hypothetical protein TSUD_26710 [Trifolium subte...   108   6e-43
ref|XP_010445567.1| PREDICTED: uncharacterized protein LOC104728...   105   2e-42
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     104   3e-42
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                     104   3e-42
gb|PNX71838.1| retrovirus-related Pol polyprotein from transposo...   108   3e-42
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                    114   4e-42
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]                    114   4e-42
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] >gi|403406144...   114   4e-42
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]                    114   4e-42

>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
          Length = 555

 Score =  123 bits (308), Expect(2) = 4e-54
 Identities = 61/120 (50%), Positives = 76/120 (63%)
 Frame = -3

Query: 579 IQLPADPPNTSPTTSFNHNITEPPTHNTSTQPTPLNSSNFNHRMITRAKNNIHKPLRKMN 400
           ++  + P   SP  + +     P    T+T+P  L      HRM TRAKNNI KP++K+N
Sbjct: 187 LETTSPPVAPSPQQASSTPQPSPQPSFTTTEPQILVPPPTQHRMTTRAKNNITKPIQKLN 246

Query: 399 LHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLVGCKWIF 220
           LHT      +  PT+++QALKDH WR+AMSEEY ALV NGTWELVPP    N VGCKWIF
Sbjct: 247 LHTHKPTFQNTTPTSISQALKDHNWRQAMSEEYGALVCNGTWELVPPKDITNQVGCKWIF 306



 Score =  116 bits (291), Expect(2) = 4e-54
 Identities = 56/73 (76%), Positives = 63/73 (86%)
 Frame = -1

Query: 221 FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
           F  KR S GS+DR+KA LVAKGFHQRPG+DY++TFS VVKPTT+RLVLSI VS GW LRQ
Sbjct: 306 FCIKRNSYGSIDRYKAHLVAKGFHQRPGVDYHETFSLVVKPTTVRLVLSIVVSNGWSLRQ 365

Query: 41  LDINNAFLQGTLS 3
           LD+NNAFLQG LS
Sbjct: 366 LDVNNAFLQGRLS 378


>emb|CAN78042.1| hypothetical protein VITISV_041808 [Vitis vinifera]
          Length = 595

 Score =  130 bits (327), Expect(2) = 2e-51
 Identities = 70/121 (57%), Positives = 82/121 (67%), Gaps = 4/121 (3%)
 Frame = -3

Query: 579 IQLPADPPNTSPTTSFNHNITEPPT----HNTSTQPTPLNSSNFNHRMITRAKNNIHKPL 412
           I LP+  P   PTTS     T+P T    HNT++QP P+      H M TRAKNNI KP+
Sbjct: 88  ISLPS--PEIQPTTSVLSPNTQPNTSILVHNTTSQPPPI------HSMTTRAKNNIRKPI 139

Query: 411 RKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLVGC 232
           +K+NL TQL+   D+EPT VTQALKD KW  AM EEYDALV NGTWELVP D + N+VGC
Sbjct: 140 QKLNLSTQLSHPYDVEPTIVTQALKDPKWHWAMFEEYDALVRNGTWELVPSDSSHNIVGC 199

Query: 231 K 229
           K
Sbjct: 200 K 200



 Score =  100 bits (249), Expect(2) = 2e-51
 Identities = 48/61 (78%), Positives = 54/61 (88%)
 Frame = -1

Query: 185 RFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQLDINNAFLQGTL 6
           + KARLV KGFHQ+P LDY+DTFS VVKPTT+RLVLS+AVS GW LRQLD+NNAFLQG L
Sbjct: 200 KHKARLVVKGFHQQPRLDYHDTFSLVVKPTTVRLVLSLAVSHGWSLRQLDVNNAFLQGHL 259

Query: 5   S 3
           S
Sbjct: 260 S 260


>gb|PKI44367.1| hypothetical protein CRG98_035241, partial [Punica granatum]
          Length = 584

 Score =  122 bits (307), Expect(2) = 1e-50
 Identities = 54/72 (75%), Positives = 67/72 (93%)
 Frame = -1

Query: 221 FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
           FR KR +DGS++R+KARLVAKGFHQRPGLDY +TFSPV+KPTTIR+VLS+AVS GWP+RQ
Sbjct: 161 FRIKRNADGSINRYKARLVAKGFHQRPGLDYTETFSPVIKPTTIRVVLSLAVSSGWPIRQ 220

Query: 41  LDINNAFLQGTL 6
           LD++NAFL G++
Sbjct: 221 LDVSNAFLHGSI 232



 Score =  105 bits (262), Expect(2) = 1e-50
 Identities = 59/126 (46%), Positives = 79/126 (62%)
 Frame = -3

Query: 597 TSANHDIQLPADPPNTSPTTSFNHNITEPPTHNTSTQPTPLNSSNFNHRMITRAKNNIHK 418
           TS++ +I     PP  SP+ +       PP    S  P P + S   H MITR+KNNI K
Sbjct: 49  TSSSSNIDSEVSPPILSPSPA-------PP----SLPPPPPHPSR-PHPMITRSKNNIFK 96

Query: 417 PLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLV 238
           P ++++L T+      LEPT V+QAL+D KWR AMSEE++ALV N TW+LVP    QN++
Sbjct: 97  P-KQLHLTTKHPLPESLEPTCVSQALRDSKWRLAMSEEFNALVKNHTWDLVPASKRQNII 155

Query: 237 GCKWIF 220
           GCKW+F
Sbjct: 156 GCKWVF 161


>ref|XP_010531643.1| PREDICTED: uncharacterized protein LOC104807900 [Tarenaya
           hassleriana]
          Length = 1047

 Score =  131 bits (330), Expect(2) = 2e-48
 Identities = 62/73 (84%), Positives = 69/73 (94%)
 Frame = -1

Query: 221 FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
           FR KRK DGSVDR+KARLVAKGFHQRPG+DY++TFSPVVKPTTIR+VLS+AVSRGW LRQ
Sbjct: 640 FRIKRKPDGSVDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTIRVVLSLAVSRGWTLRQ 699

Query: 41  LDINNAFLQGTLS 3
           LD+NNAFLQG LS
Sbjct: 700 LDVNNAFLQGNLS 712



 Score = 89.0 bits (219), Expect(2) = 2e-48
 Identities = 39/79 (49%), Positives = 54/79 (68%)
 Frame = -3

Query: 456 HRMITRAKNNIHKPLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGT 277
           H M TR+KNNI  P  +  L   +  ++D+EP++VTQA+KD  WR AM+EE+ AL  N T
Sbjct: 562 HPMQTRSKNNILMPNPRYTLMASVADTSDIEPSSVTQAIKDPNWRAAMTEEFQALCRNNT 621

Query: 276 WELVPPDPNQNLVGCKWIF 220
           W+LVP     N+VGC+W+F
Sbjct: 622 WDLVPSSDASNVVGCRWVF 640


>dbj|GAU28329.1| hypothetical protein TSUD_256570 [Trifolium subterraneum]
          Length = 1025

 Score =  116 bits (290), Expect(2) = 4e-48
 Identities = 53/79 (67%), Positives = 64/79 (81%)
 Frame = -1

Query: 242 LLDVSGFFRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVS 63
           L+     FR KR SD S+DR+KARLVAKGFHQRPG DY +TFSPVVKP TI ++L++ V 
Sbjct: 548 LVGCKWIFRIKRNSDESIDRYKARLVAKGFHQRPGCDYTETFSPVVKPVTIHVILTLVVR 607

Query: 62  RGWPLRQLDINNAFLQGTL 6
           +GW +RQLD+NNAFLQGTL
Sbjct: 608 QGWSVRQLDVNNAFLQGTL 626



 Score =  103 bits (257), Expect(2) = 4e-48
 Identities = 61/142 (42%), Positives = 82/142 (57%), Gaps = 18/142 (12%)
 Frame = -3

Query: 591 ANHDIQLPADP--PNTSPTTSFNH-----NITEPPTHNT-STQPTPLNSSNF-------- 460
           A H   +P  P    TS +  FNH     +++ P TH++ S +P P+  S          
Sbjct: 416 APHSPSIPHSPHLAQTSSSNDFNHPEPSHDVSSPSTHSSPSPEPQPITVSPSPPPQPTVP 475

Query: 459 --NHRMITRAKNNIHKPLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVT 286
             +  +ITR+KNNI KPL+K+NLH +   S  +EP+T+TQAL+D  WR AM  E+DAL  
Sbjct: 476 PNDGGIITRSKNNIVKPLQKLNLHVR--PSPTVEPSTITQALRDPDWRFAMQNEFDALHR 533

Query: 285 NGTWELVPPDPNQNLVGCKWIF 220
           N TW+LV      NLVGCKWIF
Sbjct: 534 NNTWDLVSRSSAPNLVGCKWIF 555


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
 dbj|BAH30336.1| hypothetical protein, partial [Arabidopsis thaliana]
          Length = 1459

 Score =  112 bits (281), Expect(2) = 6e-47
 Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 13/126 (10%)
 Frame = -3

Query: 558  PNTSPTTSFNHNITEPPTHNTSTQPTPLNSSNF-------------NHRMITRAKNNIHK 418
            PN +P T+ + +I + P   ++T   P N +               NH+M TR+KNNI K
Sbjct: 872  PNPNPETNPSSSIEQRPVDKSTTTALPPNQTTIAATSNSRSQPPKNNHQMKTRSKNNITK 931

Query: 417  PLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLV 238
            P  K +L   L + +  EP TVTQALKD KWR AMS+E+DA   N TW+LVPP+P Q+LV
Sbjct: 932  PKTKTSLTVALTQPHLSEPNTVTQALKDKKWRFAMSDEFDAQQRNHTWDLVPPNPTQHLV 991

Query: 237  GCKWIF 220
            GC+W+F
Sbjct: 992  GCRWVF 997



 Score =  103 bits (256), Expect(2) = 6e-47
 Identities = 46/73 (63%), Positives = 62/73 (84%)
 Frame = -1

Query: 221  FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
            F+ K   +G +D++KARLVAKGF+Q+ G+DY +TFSPV+K TTIR+VL +AV + WPL+Q
Sbjct: 997  FKLKYLPNGLIDKYKARLVAKGFNQQYGVDYAETFSPVIKATTIRVVLDVAVKKNWPLKQ 1056

Query: 41   LDINNAFLQGTLS 3
            LD+NNAFLQGTL+
Sbjct: 1057 LDVNNAFLQGTLT 1069


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  117 bits (293), Expect(2) = 7e-45
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = -1

Query: 221  FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
            FR KR  DGS+ R+KARLVAKGFHQRPG+DY+DTFSPVVKPTTIR+VLSIA+S  W + Q
Sbjct: 944  FRIKRNPDGSISRYKARLVAKGFHQRPGVDYHDTFSPVVKPTTIRVVLSIALSNXWXISQ 1003

Query: 41   LDINNAFLQGTLS 3
            LD+NN FL GTL+
Sbjct: 1004 LDVNNXFLHGTLT 1016



 Score = 91.7 bits (226), Expect(2) = 7e-45
 Identities = 50/116 (43%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
 Frame = -3

Query: 552  TSPTTSFNHNITEPPTHNTSTQPTPLNSSNFNHRMITRAKNNIHKPLRKMNLHTQLNKSN 373
            +SP+ S +     PPT    + P P  S    HR++TR++NNIH P +  +  T  + + 
Sbjct: 838  SSPSLSLS-----PPTQPQGSNPLPEPS----HRIVTRSQNNIHCPKQFPDFKTSFHVTK 888

Query: 372  -----DLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLVGCKWIF 220
                  LEPTT +QALKD KW   M +E  AL  N TW LVPP  N N+VGCKW+F
Sbjct: 889  HPLPXSLEPTTASQALKDPKWCAXMDDELAALARNCTWVLVPPPSNHNIVGCKWVF 944


>gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Arabis alpina]
          Length = 2090

 Score =  110 bits (275), Expect(2) = 2e-44
 Identities = 50/73 (68%), Positives = 63/73 (86%)
 Frame = -1

Query: 221  FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
            F  K  SDGS++R KARLVA+G++QRPG+DY +TFSPV+K TTIRLVL +AV R WP++Q
Sbjct: 1036 FTKKYNSDGSLNRHKARLVAQGYNQRPGIDYAETFSPVIKSTTIRLVLGVAVGRSWPIKQ 1095

Query: 41   LDINNAFLQGTLS 3
            LD+NNAFLQGTL+
Sbjct: 1096 LDVNNAFLQGTLT 1108



 Score = 97.1 bits (240), Expect(2) = 2e-44
 Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
 Frame = -3

Query: 555  NTSPTTSFNHNITEPPTHNTSTQPTPLNS--SNFNHRMITRAKNNIHKPLRKMNLHTQLN 382
            N+SPT S   +I + P   +S+ P   +        RM TR+ + I KP +K+NL   + 
Sbjct: 922  NSSPTKSQPQSINQTPNLTSSSSPVSPSPPPKPVPQRMATRSVHGIIKPTKKLNLIAAIT 981

Query: 381  KSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQ-NLVGCKWIF 220
              +D+EP T +QALKD +WR+AM  EY+A + N +W+LVPP P Q   VGCKWIF
Sbjct: 982  SPSDIEPRTASQALKDERWRKAMGLEYNAQLDNHSWDLVPPPPPQVTRVGCKWIF 1036



 Score = 95.5 bits (236), Expect = 3e-19
 Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
 Frame = -3

Query: 555  NTSPTTSFNHNITEPPTHNTSTQPTPLNS--SNFNHRMITRAKNNIHKPLRKMNLHTQLN 382
            N+SPT S    I + P   +S+ P   +        RM TR+ + I KP +K+NL   + 
Sbjct: 1975 NSSPTKSQPQFINQTPNLTSSSSPVSPSPPPKPVPQRMATRSVHGIIKPTKKLNLIAAIT 2034

Query: 381  KSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQ-NLVGCKWIF 220
              +D+EP T +QALKD +WR+AM  EY+A + N +W+LVPP P Q   VGCKWIF
Sbjct: 2035 SPSDIEPRTASQALKDERWRKAMGLEYNAQLDNHSWDLVPPPPPQVTRVGCKWIF 2089


>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
            polyprotein from Arabidopsis arenosa [Arabidopsis
            thaliana]
          Length = 1194

 Score =  104 bits (259), Expect(2) = 7e-44
 Identities = 48/73 (65%), Positives = 60/73 (82%)
 Frame = -1

Query: 221  FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
            F  K   DGS++R+KAR +AKGFHQ+ GLDY++TFSPV+K TT++ VL IAVSR W +RQ
Sbjct: 946  FTIKYNPDGSINRYKARFLAKGFHQQHGLDYSNTFSPVIKSTTVQTVLDIAVSRSWDIRQ 1005

Query: 41   LDINNAFLQGTLS 3
            LDINNAFLQG L+
Sbjct: 1006 LDINNAFLQGRLT 1018



 Score =  101 bits (251), Expect(2) = 7e-44
 Identities = 54/126 (42%), Positives = 75/126 (59%)
 Frame = -3

Query: 597  TSANHDIQLPADPPNTSPTTSFNHNITEPPTHNTSTQPTPLNSSNFNHRMITRAKNNIHK 418
            +S +H  Q    PPN+  ++S +      P+  +S  P P   +   H M TRAKNNI K
Sbjct: 824  SSPSHSNQPNKTPPNSPSSSSSSPTPIPSPSPQSSNSPPPPPQNQ--HSMRTRAKNNITK 881

Query: 417  PLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLV 238
            P++K+ L     K     PTTV +AL+D  WR AMSEE++A + N T++LVPP P+QN V
Sbjct: 882  PIKKLTL-AATPKGKSKIPTTVAEALRDPNWRNAMSEEFNAGLRNSTYDLVPPKPHQNFV 940

Query: 237  GCKWIF 220
            G +WIF
Sbjct: 941  GTRWIF 946


>gb|OMO91924.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1192

 Score =  118 bits (296), Expect(2) = 6e-43
 Identities = 55/73 (75%), Positives = 64/73 (87%)
 Frame = -1

Query: 221 FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
           +R KRK  GS+DRFKARLVAKGFHQRPGLD+ +TFS V+KPTTIR VL IA+S GW L+Q
Sbjct: 775 YRIKRKPHGSIDRFKARLVAKGFHQRPGLDFTETFSTVIKPTTIRTVLCIALSSGWSLKQ 834

Query: 41  LDINNAFLQGTLS 3
           LD+NNAFLQGTL+
Sbjct: 835 LDVNNAFLQGTLT 847



 Score = 84.0 bits (206), Expect(2) = 6e-43
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
 Frame = -3

Query: 561  PPNTSPTTSFNHNITEPPTHN---TSTQPTP-LNSSNFNHRMITRAKNNIHKPLRKMNLH 394
            P ++S  TS   N T P + N   T TQ T  L  +   H M+TR++NNI KP ++  + 
Sbjct: 659  PSSSSVLTSSQGNDTLPSSLNSITTQTQQTQTLPQTTRTHSMVTRSQNNIFKP-KQAYIV 717

Query: 393  TQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLVGCKWIF 220
            ++       EP+ V+QA+K  +WR AM+ +++ALV N TW LVPP   QN+VG KW++
Sbjct: 718  SKHTLPEPTEPSCVSQAIKKSEWREAMTVKFNALVKNRTWTLVPPCTGQNVVGNKWVY 775


>gb|PNY14327.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 1151

 Score =  109 bits (273), Expect(2) = 6e-43
 Identities = 50/73 (68%), Positives = 62/73 (84%)
 Frame = -1

Query: 221 FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
           FR KR  DGSV R+KARLVAKGF Q PG+D+ +TFSPVVKP TI++VL+IA++R WP+ Q
Sbjct: 681 FRVKRNPDGSVSRYKARLVAKGFTQTPGIDFKETFSPVVKPQTIKVVLTIALARRWPMHQ 740

Query: 41  LDINNAFLQGTLS 3
           LD+NNAFLQG L+
Sbjct: 741 LDVNNAFLQGKLT 753



 Score = 92.8 bits (229), Expect(2) = 6e-43
 Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 5/121 (4%)
 Frame = -3

Query: 567 ADPPNTSPTTSFNHNITEP-----PTHNTSTQPTPLNSSNFNHRMITRAKNNIHKPLRKM 403
           ++P   S  TS N N T+P     P+  T+T+P P N S  +  +ITR+KNNI KP +K+
Sbjct: 565 SEPAAVSDLTS-NGN-TDPSADVLPSLPTTTRPGPTNPSR-SEPIITRSKNNIFKP-KKV 620

Query: 402 NLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLVGCKWI 223
              T+     ++EP+TVTQALK  +W +A S E+DAL+ N TW LVP    QN+VGCKW+
Sbjct: 621 FTTTKHEIPENIEPSTVTQALKIPEWSQACSAEFDALLHNRTWSLVPRTNKQNIVGCKWL 680

Query: 222 F 220
           F
Sbjct: 681 F 681


>dbj|GAU18207.1| hypothetical protein TSUD_26710 [Trifolium subterraneum]
          Length = 1052

 Score =  108 bits (271), Expect(2) = 6e-43
 Identities = 50/72 (69%), Positives = 61/72 (84%)
 Frame = -1

Query: 221 FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
           FR KR SDGS+D +KARLVAKGFHQRPG DY +TF+ VVK  TIR++L++ V +GW +RQ
Sbjct: 608 FRIKRNSDGSIDCYKARLVAKGFHQRPGCDYTETFNLVVKSVTIRVILTLVVRQGWYVRQ 667

Query: 41  LDINNAFLQGTL 6
           LD+NNAFLQGTL
Sbjct: 668 LDVNNAFLQGTL 679



 Score = 93.6 bits (231), Expect(2) = 6e-43
 Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
 Frame = -3

Query: 591 ANHDIQLPADP--PNTSPTTSFNH-----NITEPPTHNT------------STQPTPLNS 469
           A H + +P  P    TS +  FNH     ++  P TH++            S  P P   
Sbjct: 469 APHSLSIPHSPHLAQTSSSNDFNHPEPSRDVASPSTHSSLSPEPQPPTVSPSPPPQPTIP 528

Query: 468 SNFNHRMITRAKNNIHKPLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALV 289
            N +  +ITR+KNNI KPL K+ LH +   S  +E +T+T+AL D  WR AM  E+DAL 
Sbjct: 529 PN-DGGIITRSKNNIVKPLEKLKLHVR--PSPPVESSTITRALCDPDWRFAMQNEFDALH 585

Query: 288 TNGTWELVPPDPNQNLVGCKWIF 220
            N TW+LV      NLVGCKW+F
Sbjct: 586 RNNTWDLVSRSSAPNLVGCKWVF 608


>ref|XP_010445567.1| PREDICTED: uncharacterized protein LOC104728255 [Camelina sativa]
          Length = 862

 Score =  105 bits (261), Expect(2) = 2e-42
 Identities = 56/123 (45%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
 Frame = -3

Query: 570 PADPPNTS--PTTSFNHNITEPPTHNTSTQP----TPLNSSNFNHRMITRAKNNIHKPLR 409
           P  PP     PTT         P      QP    T +     NH M TRAKN I KP  
Sbjct: 591 PTTPPQNELRPTTQPRPQTNIVPHRARPIQPQNQTTTIEPPQNNHNMQTRAKNRITKPNT 650

Query: 408 KMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPNQNLVGCK 229
           K++LH   +  +  EPTT+ QALKD  W  A S+EYDAL  N TW+LVPP+ +QN+VGCK
Sbjct: 651 KLSLHVVASPISLKEPTTIAQALKDPNWSPACSKEYDALTINHTWDLVPPNAHQNIVGCK 710

Query: 228 WIF 220
           W+F
Sbjct: 711 WVF 713



 Score = 95.5 bits (236), Expect(2) = 2e-42
 Identities = 46/73 (63%), Positives = 59/73 (80%)
 Frame = -1

Query: 221 FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
           F TK  ++G +DR+K+RLVAKGFHQ+ G DY +TFS V+K TTIRLVL +AV +  PL+Q
Sbjct: 713 FTTKFHANGVLDRYKSRLVAKGFHQQYGKDYAETFSLVIKSTTIRLVLDVAVKKSRPLKQ 772

Query: 41  LDINNAFLQGTLS 3
           LD+NNAFLQG L+
Sbjct: 773 LDVNNAFLQGDLT 785


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  104 bits (260), Expect(2) = 3e-42
 Identities = 49/73 (67%), Positives = 61/73 (83%)
 Frame = -1

Query: 221  FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
            F  K  S+G +DR+KARLVAKGFHQ+ G D+ +TFSPV+K TT+R VL IAVS+GW +RQ
Sbjct: 989  FTLKYLSNGVLDRYKARLVAKGFHQQYGHDFKETFSPVIKSTTVRSVLHIAVSKGWSIRQ 1048

Query: 41   LDINNAFLQGTLS 3
            +D+NNAFLQGTLS
Sbjct: 1049 IDVNNAFLQGTLS 1061



 Score = 95.5 bits (236), Expect(2) = 3e-42
 Identities = 57/130 (43%), Positives = 74/130 (56%), Gaps = 13/130 (10%)
 Frame = -3

Query: 570  PADPPNTSP-TTSFNHNITEP--------PTHNTSTQPTPLNSSN---FNHRMITRAKNN 427
            P  P +TSP ++S   N   P        PT  +S  P+P  + N     H M TR+KNN
Sbjct: 860  PQSPQSTSPHSSSPQPNSPNPQHSPRSLTPTLTSSPSPSPPPNPNPPPIQHTMRTRSKNN 919

Query: 426  IHKPLRKM-NLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPN 250
            I KP  K  NL T+      + P TV +AL D  WR+AM +E +A   NGT++LVPP PN
Sbjct: 920  IVKPNPKFANLATKPTPLKPIIPKTVVEALLDPNWRQAMCDEINAQTRNGTFDLVPPAPN 979

Query: 249  QNLVGCKWIF 220
            QN+VGCKW+F
Sbjct: 980  QNVVGCKWVF 989


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  104 bits (260), Expect(2) = 3e-42
 Identities = 49/73 (67%), Positives = 61/73 (83%)
 Frame = -1

Query: 221  FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
            F  K  S+G +DR+KARLVAKGFHQ+ G D+ +TFSPV+K TT+R VL IAVS+GW +RQ
Sbjct: 989  FTLKYLSNGVLDRYKARLVAKGFHQQYGHDFKETFSPVIKSTTVRSVLHIAVSKGWSIRQ 1048

Query: 41   LDINNAFLQGTLS 3
            +D+NNAFLQGTLS
Sbjct: 1049 IDVNNAFLQGTLS 1061



 Score = 95.5 bits (236), Expect(2) = 3e-42
 Identities = 57/130 (43%), Positives = 74/130 (56%), Gaps = 13/130 (10%)
 Frame = -3

Query: 570  PADPPNTSP-TTSFNHNITEP--------PTHNTSTQPTPLNSSN---FNHRMITRAKNN 427
            P  P +TSP ++S   N   P        PT  +S  P+P  + N     H M TR+KNN
Sbjct: 860  PQSPQSTSPHSSSPQPNSPNPQHSPRSLTPTLTSSPSPSPPPNPNPPPIQHTMRTRSKNN 919

Query: 426  IHKPLRKM-NLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWELVPPDPN 250
            I KP  K  NL T+      + P TV +AL D  WR+AM +E +A   NGT++LVPP PN
Sbjct: 920  IVKPNPKFANLATKPTPLKPIIPKTVVEALLDPNWRQAMCDEINAQTRNGTFDLVPPAPN 979

Query: 249  QNLVGCKWIF 220
            QN+VGCKW+F
Sbjct: 980  QNVVGCKWVF 989


>gb|PNX71838.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 653

 Score =  108 bits (271), Expect(2) = 3e-42
 Identities = 49/73 (67%), Positives = 59/73 (80%)
 Frame = -1

Query: 221 FRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAVSRGWPLRQ 42
           FR KR  DGSV R+KARLVAKGFHQ+PG+DY DTFSPV+KP TI+LV+ IA+   W L  
Sbjct: 181 FRIKRNPDGSVARYKARLVAKGFHQQPGIDYTDTFSPVIKPQTIKLVICIALHHNWSLSH 240

Query: 41  LDINNAFLQGTLS 3
           +D+NNAFL GT+S
Sbjct: 241 MDVNNAFLNGTIS 253



 Score = 91.3 bits (225), Expect(2) = 3e-42
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 14/137 (10%)
 Frame = -3

Query: 588 NHDIQLPADPPNTSPTTSFNHNITEPPTHNTSTQPTPL--------------NSSNFNHR 451
           N+   +P  PP+ S T   + NI   P   T+  PT +              NS   +H 
Sbjct: 46  NNTSHVPISPPHHSHTNLNSTNIPIQPPTTTTNPPTNIPSIIEKPAAATSLPNSLPGSHS 105

Query: 450 MITRAKNNIHKPLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTNGTWE 271
           M+TR+K  I KP +K+   ++      +EP+  ++A+K  +W+ AMS+E++AL++N TW 
Sbjct: 106 MVTRSKKGIFKP-KKLYTVSKFPLPITIEPSCPSKAIKIAEWKSAMSDEFNALLSNNTWS 164

Query: 270 LVPPDPNQNLVGCKWIF 220
           LVPP  +QN++GCKW+F
Sbjct: 165 LVPPHSSQNVIGCKWVF 181


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  114 bits (284), Expect(2) = 4e-42
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = -1

Query: 245  TLLDVSGFFRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAV 66
            T++     F  K  SDGS++R+KARLVAKG++QRPGLDY +TFSPV+K T+IR+VL +AV
Sbjct: 998  TIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1057

Query: 65   SRGWPLRQLDINNAFLQGTLS 3
             R WP+RQLD+NNAFLQGTL+
Sbjct: 1058 DRSWPIRQLDVNNAFLQGTLT 1078



 Score = 85.9 bits (211), Expect(2) = 4e-42
 Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
 Frame = -3

Query: 594  SANHDIQLPADPPNT----SPTTSFNHNITEPPTHNTSTQPTP------------LNSSN 463
            S N +  LP  P ++    +P+TS +     P + +TST P P              +  
Sbjct: 868  SPNQNSPLPQSPISSPHIPTPSTSISEP-NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPV 926

Query: 462  FNHRMITRAKNNIHKPLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTN 283
              H M TRAK+ I KP +K +  T L  ++  EP T  QA+KD +WR+AM  E +A + N
Sbjct: 927  NTHSMATRAKDGIRKPNQKYSYATSLAANS--EPRTAIQAMKDDRWRQAMGSEINAQIGN 984

Query: 282  GTWELV-PPDPNQNLVGCKWIF 220
             TW+LV PP P+  +VGC+WIF
Sbjct: 985  HTWDLVPPPPPSVTIVGCRWIF 1006


>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  114 bits (284), Expect(2) = 4e-42
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = -1

Query: 245  TLLDVSGFFRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAV 66
            T++     F  K  SDGS++R+KARLVAKG++QRPGLDY +TFSPV+K T+IR+VL +AV
Sbjct: 998  TIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1057

Query: 65   SRGWPLRQLDINNAFLQGTLS 3
             R WP+RQLD+NNAFLQGTL+
Sbjct: 1058 DRSWPIRQLDVNNAFLQGTLT 1078



 Score = 85.9 bits (211), Expect(2) = 4e-42
 Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
 Frame = -3

Query: 594  SANHDIQLPADPPNT----SPTTSFNHNITEPPTHNTSTQPTP------------LNSSN 463
            S N +  LP  P ++    +P+TS +     P + +TST P P              +  
Sbjct: 868  SPNQNSPLPQSPISSPHIPTPSTSISEP-NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPV 926

Query: 462  FNHRMITRAKNNIHKPLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTN 283
              H M TRAK+ I KP +K +  T L  ++  EP T  QA+KD +WR+AM  E +A + N
Sbjct: 927  NTHSMATRAKDGIRKPNQKYSYATSLAANS--EPRTAIQAMKDDRWRQAMGSEINAQIGN 984

Query: 282  GTWELV-PPDPNQNLVGCKWIF 220
             TW+LV PP P+  +VGC+WIF
Sbjct: 985  HTWDLVPPPPPSVTIVGCRWIF 1006


>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana]
 dbj|BAM42648.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  114 bits (284), Expect(2) = 4e-42
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = -1

Query: 245  TLLDVSGFFRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAV 66
            T++     F  K  SDGS++R+KARLVAKG++QRPGLDY +TFSPV+K T+IR+VL +AV
Sbjct: 998  TIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1057

Query: 65   SRGWPLRQLDINNAFLQGTLS 3
             R WP+RQLD+NNAFLQGTL+
Sbjct: 1058 DRSWPIRQLDVNNAFLQGTLT 1078



 Score = 85.9 bits (211), Expect(2) = 4e-42
 Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
 Frame = -3

Query: 594  SANHDIQLPADPPNT----SPTTSFNHNITEPPTHNTSTQPTP------------LNSSN 463
            S N +  LP  P ++    +P+TS +     P + +TST P P              +  
Sbjct: 868  SPNQNSPLPQSPISSPHIPTPSTSISEP-NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPV 926

Query: 462  FNHRMITRAKNNIHKPLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTN 283
              H M TRAK+ I KP +K +  T L  ++  EP T  QA+KD +WR+AM  E +A + N
Sbjct: 927  NTHSMATRAKDGIRKPNQKYSYATSLAANS--EPRTAIQAMKDDRWRQAMGSEINAQIGN 984

Query: 282  GTWELV-PPDPNQNLVGCKWIF 220
             TW+LV PP P+  +VGC+WIF
Sbjct: 985  HTWDLVPPPPPSVTIVGCRWIF 1006


>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  114 bits (284), Expect(2) = 4e-42
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = -1

Query: 245  TLLDVSGFFRTKRKSDGSVDRFKARLVAKGFHQRPGLDYNDTFSPVVKPTTIRLVLSIAV 66
            T++     F  K  SDGS++R+KARLVAKG++QRPGLDY +TFSPV+K T+IR+VL +AV
Sbjct: 998  TIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1057

Query: 65   SRGWPLRQLDINNAFLQGTLS 3
             R WP+RQLD+NNAFLQGTL+
Sbjct: 1058 DRSWPIRQLDVNNAFLQGTLT 1078



 Score = 85.9 bits (211), Expect(2) = 4e-42
 Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
 Frame = -3

Query: 594  SANHDIQLPADPPNT----SPTTSFNHNITEPPTHNTSTQPTP------------LNSSN 463
            S N +  LP  P ++    +P+TS +     P + +TST P P              +  
Sbjct: 868  SPNQNSPLPQSPISSPHIPTPSTSISEP-NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPV 926

Query: 462  FNHRMITRAKNNIHKPLRKMNLHTQLNKSNDLEPTTVTQALKDHKWRRAMSEEYDALVTN 283
              H M TRAK+ I KP +K +  T L  ++  EP T  QA+KD +WR+AM  E +A + N
Sbjct: 927  NTHSMATRAKDGIRKPNQKYSYATSLAANS--EPRTAIQAMKDDRWRQAMGSEINAQIGN 984

Query: 282  GTWELV-PPDPNQNLVGCKWIF 220
             TW+LV PP P+  +VGC+WIF
Sbjct: 985  HTWDLVPPPPPSVTIVGCRWIF 1006