BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00034246
         (557 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG02287.1| putative ribonuclease H-like domain-containing pr...   188   1e-56
ref|XP_016488584.1| PREDICTED: uncharacterized protein LOC107808...   184   1e-50
gb|PNX54820.1| hypothetical protein L195_g048442, partial [Trifo...   172   2e-49
gb|PNX73402.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   178   2e-48
dbj|GAU31857.1| hypothetical protein TSUD_114680 [Trifolium subt...   177   4e-48
dbj|GAU27453.1| hypothetical protein TSUD_161390 [Trifolium subt...   176   1e-47
ref|XP_015169757.1| PREDICTED: uncharacterized protein LOC107062...   176   2e-47
dbj|GAU29525.1| hypothetical protein TSUD_115470 [Trifolium subt...   174   5e-47
gb|PNX96484.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   174   6e-47
gb|AAO23078.1| polyprotein [Glycine max]                              174   8e-47
dbj|GAU44853.1| hypothetical protein TSUD_112270 [Trifolium subt...   173   9e-47
dbj|GAU11620.1| hypothetical protein TSUD_346120 [Trifolium subt...   173   1e-46
dbj|GAU26218.1| hypothetical protein TSUD_354400 [Trifolium subt...   173   2e-46
gb|PNX80974.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   164   2e-46
gb|KYP39590.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]   172   2e-46
gb|KYP39589.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]   172   2e-46
dbj|GAU25204.1| hypothetical protein TSUD_151040 [Trifolium subt...   172   2e-46
dbj|GAU43714.1| hypothetical protein TSUD_179970 [Trifolium subt...   172   3e-46
gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   172   3e-46
gb|PNX73110.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   171   5e-46

>gb|OTG02287.1| putative ribonuclease H-like domain-containing protein [Helianthus
           annuus]
          Length = 273

 Score =  188 bits (478), Expect = 1e-56
 Identities = 101/179 (56%), Positives = 119/179 (66%)
 Frame = -2

Query: 550 FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
           F +ETDA GTG+GA L Q  HP+AYFSK+L   M+ + TY REM+A+T A+AKWRQYLLG
Sbjct: 32  FTIETDASGTGVGAVLSQEKHPLAYFSKKLCPRMQQASTYHREMYAITQAIAKWRQYLLG 91

Query: 370 HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
           H F I TDQQ LK L +QVIQTP+QQKWL KLLGFDF I Y+PG  N AADALSR     
Sbjct: 92  HKFTIVTDQQSLKRLQDQVIQTPEQQKWLGKLLGFDFDIVYRPGTLNSAADALSRVPTGH 151

Query: 190 LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
           L  A S    S L +L   A+ D     +  + Q  P    EY+LKDG LLY GR +IP
Sbjct: 152 L-MAISAPFPSFLHDLSTLAHSDPEFTSLLHEYQADPHKFPEYTLKDGFLLYKGRFLIP 209


>ref|XP_016488584.1| PREDICTED: uncharacterized protein LOC107808570 [Nicotiana tabacum]
          Length = 982

 Score =  184 bits (468), Expect = 1e-50
 Identities = 93/179 (51%), Positives = 126/179 (70%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            F VETDA G GIG  L Q+ HP+A+FS++L   M+ + TY REMFA+T AV+KWRQYLLG
Sbjct: 754  FQVETDASGVGIGVVLSQKGHPVAFFSQKLSPRMQGASTYHREMFAITQAVSKWRQYLLG 813

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
              F I TDQQ L+ L  Q+IQTP+QQKWL KL+G+DF+I Y+PG++N AADALSR   DA
Sbjct: 814  RRFTILTDQQALRNLTTQIIQTPEQQKWLCKLVGYDFRILYRPGKQNLAADALSRA-PDA 872

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
             Y A +V   +L++ELR        +++I   + Q+   + ++S ++GLL Y GRL+IP
Sbjct: 873  TYLAITVQIPALVEELRELNKNHPELLDIQTSIMQQLDSVIDFSFREGLLFYKGRLVIP 931


>gb|PNX54820.1| hypothetical protein L195_g048442, partial [Trifolium pratense]
          Length = 364

 Score =  172 bits (437), Expect = 2e-49
 Identities = 94/179 (52%), Positives = 120/179 (67%)
 Frame = -2

Query: 550 FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
           F++ETDA G GIGA L Q+ HPIAYFSK+L    +    Y REM A+  A+AK+R YLLG
Sbjct: 136 FILETDASGIGIGAVLHQQGHPIAYFSKKLVLRDQKKSAYFREMLAIAEAIAKFRHYLLG 195

Query: 370 HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
           H FIIRTDQ+ L+ LM+Q +QTPDQQ+WL K LG+DF IEYKPG+EN AADALSR     
Sbjct: 196 HKFIIRTDQKSLRSLMDQSLQTPDQQQWLHKFLGYDFTIEYKPGKENLAADALSR----V 251

Query: 190 LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
           +  A+S      +D++R     D  M+EI  K Q     + +YS +DGLL +  RL+IP
Sbjct: 252 MVLAWSEPKCLFIDQVRLALQDDPEMVEIIRKCQTAKAPI-QYSTRDGLLYWKHRLVIP 309


>gb|PNX73402.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 895

 Score =  178 bits (451), Expect = 2e-48
 Identities = 95/179 (53%), Positives = 121/179 (67%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            FV+ETDA G GIGA L Q  HPIAYFSK+L    +    Y REMFA+  A+AK+R YLLG
Sbjct: 578  FVLETDASGVGIGAVLHQEGHPIAYFSKKLVPRNQKKSAYFREMFAIVEAIAKFRHYLLG 637

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            H FIIRTDQ+ L+ LM+Q +QTPDQQ+WL K LG+DF IEYKPG+EN AADALSR     
Sbjct: 638  HKFIIRTDQKSLRSLMDQSLQTPDQQEWLHKFLGYDFTIEYKPGKENMAADALSR----V 693

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
            +  ++S      +DE+R     D  ++EI LK       + +Y++KDGLL +  RL+IP
Sbjct: 694  MTLSWSEPQCQFIDEIRAALKKDQNLVEIILKCISGKAPI-QYTMKDGLLYWKQRLVIP 751


>dbj|GAU31857.1| hypothetical protein TSUD_114680 [Trifolium subterraneum]
          Length = 818

 Score =  177 bits (448), Expect = 4e-48
 Identities = 91/179 (50%), Positives = 122/179 (68%)
 Frame = -2

Query: 550 FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
           F++ETDA GTGIGA L Q  HPIAYFSK+L  SM+    Y RE++AVT A+AK+R Y+LG
Sbjct: 301 FILETDASGTGIGAILSQDKHPIAYFSKKLNTSMQHKSAYVRELYAVTEAMAKFRHYILG 360

Query: 370 HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
           H FIIRTDQQ LK L +Q IQTP+QQKWL K LGFDF IEYKPG++N AADALSR    +
Sbjct: 361 HKFIIRTDQQSLKALTDQTIQTPEQQKWLHKFLGFDFTIEYKPGKDNVAADALSR----S 416

Query: 190 LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
            + A S    SLL  + +  N+D  + ++ L+  Q     + Y ++  +L +  ++++P
Sbjct: 417 FFMATSSPVNSLLSTITDVVNYDPSLAQVKLQCLQGTCAESLYQVRQDILYWKNKIVVP 475


>dbj|GAU27453.1| hypothetical protein TSUD_161390 [Trifolium subterraneum]
          Length = 1531

 Score =  176 bits (446), Expect = 1e-47
 Identities = 95/180 (52%), Positives = 122/180 (67%), Gaps = 1/180 (0%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRL-PQSMRSSLTYKREMFAVTAAVAKWRQYLL 374
            F++ETDA G GIGA L Q  HPIAYFSK+L P++ R S  Y REM A+  A+AK+R YLL
Sbjct: 869  FILETDASGIGIGAVLHQEGHPIAYFSKKLVPRNQRKS-AYFREMLAIAEAIAKFRHYLL 927

Query: 373  GHCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVD 194
            GH FIIRTDQ+ L+ LMEQ +QTPDQQ+WL + LG+DF IEYKPG+EN AADALSR    
Sbjct: 928  GHKFIIRTDQKSLRNLMEQALQTPDQQEWLHRFLGYDFTIEYKPGKENVAADALSR---- 983

Query: 193  ALYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
             +  A+S     LL ++R     D  ++EI  K  Q     + Y++KD LL +  R++IP
Sbjct: 984  VMTLAWSEPQYKLLHQIRVALKQDSTLLEIMEKCAQNSDSNSNYTIKDDLLFWKHRIVIP 1043


>ref|XP_015169757.1| PREDICTED: uncharacterized protein LOC107062964 [Solanum tuberosum]
          Length = 1737

 Score =  176 bits (445), Expect = 2e-47
 Identities = 89/179 (49%), Positives = 121/179 (67%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            F VETDA G G+GA L QR HPIA++S++L   M+ + TY REM+A+T AV KWRQYLLG
Sbjct: 1133 FHVETDASGVGVGAVLSQRGHPIAFYSQKLCPRMQKAFTYHREMYAITQAVGKWRQYLLG 1192

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
              F I TDQQ LK L +QVIQTP+QQ+WL KL+GFDF I Y+PG+ N+  D LS R V+ 
Sbjct: 1193 RRFTIVTDQQSLKNLTDQVIQTPEQQQWLGKLVGFDFHIVYRPGKLNRVVDVLS-RPVEG 1251

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
               A S+     +DE+R    +   ++ I   ++Q+    ++Y L++GLL + GRL+IP
Sbjct: 1252 TLNALSIRTFDWIDEIRMATQFHPELLAIKHGIEQQTATDSDYVLREGLLFFKGRLVIP 1310


>dbj|GAU29525.1| hypothetical protein TSUD_115470 [Trifolium subterraneum]
          Length = 1556

 Score =  174 bits (442), Expect = 5e-47
 Identities = 93/179 (51%), Positives = 118/179 (65%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            F++ETDA  TGIGA L Q  HPIA+FSK+L  + +    Y RE  A+T A+AK+R YLLG
Sbjct: 885  FILETDASNTGIGAILSQEGHPIAFFSKKLGPTAQKQSAYVREFRAITEALAKFRHYLLG 944

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            H FIIRTDQ+ LK L+EQ +QTP+QQ WL K +GFDF IEYKPG+EN A DALSR ++  
Sbjct: 945  HKFIIRTDQKSLKALLEQTLQTPEQQAWLHKFIGFDFTIEYKPGKENLAVDALSRINL-- 1002

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
               A+S  H S LDELR +   D  + EI  +          Y++KD LL +  RL+IP
Sbjct: 1003 --LAWSEPHYSFLDELRLEIQQDTHLKEIIQQCLNNSCADANYTVKDNLLFWQQRLVIP 1059


>gb|PNX96484.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1258

 Score =  174 bits (441), Expect = 6e-47
 Identities = 95/180 (52%), Positives = 121/180 (67%), Gaps = 1/180 (0%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRL-PQSMRSSLTYKREMFAVTAAVAKWRQYLL 374
            FV+ETDA G GIGA L Q  HPIAYFSK+L P++ R S  Y REM A+  A+AK+R YLL
Sbjct: 596  FVLETDASGIGIGAVLHQEGHPIAYFSKKLVPRNQRKS-AYFREMLAIAEAIAKFRHYLL 654

Query: 373  GHCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVD 194
            GH FIIRTDQ+ L+ LMEQ +QTPDQQ+WL + LG+DF IEYKPG+EN AADALSR    
Sbjct: 655  GHKFIIRTDQKSLRNLMEQALQTPDQQEWLHRFLGYDFSIEYKPGKENVAADALSR---- 710

Query: 193  ALYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
             +  A+S     LL ++R     D  ++ I  K  Q     + Y++KD LL +  R++IP
Sbjct: 711  VMTMAWSEPQYKLLHQIRAALKQDSTLLGIMQKCVQNNATNSHYTVKDELLFWKHRIVIP 770


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  174 bits (440), Expect = 8e-47
 Identities = 89/181 (49%), Positives = 127/181 (70%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            F++ETDA G G+GA L Q  HPIAYFSK+L   M+    Y RE+ A+T A++K+R YLLG
Sbjct: 892  FILETDASGIGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEALSKFRHYLLG 951

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            + FIIRTDQ+ LK LM+Q +QTP+QQ WL K LG+DFKIEYKPG++NQAADALSR  +  
Sbjct: 952  NKFIIRTDQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADALSRMFM-- 1009

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIPL 11
               A+S  H   L+ELR +   D  + ++ ++  ++  D + Y++++GLL +  R++IP 
Sbjct: 1010 --LAWSEPHSIFLEELRARLISDPHLKQL-METYKQGADASHYTVREGLLYWKDRVVIPA 1066

Query: 10   Q 8
            +
Sbjct: 1067 E 1067


>dbj|GAU44853.1| hypothetical protein TSUD_112270 [Trifolium subterraneum]
          Length = 815

 Score =  173 bits (438), Expect = 9e-47
 Identities = 88/178 (49%), Positives = 124/178 (69%), Gaps = 2/178 (1%)
 Frame = -2

Query: 550 FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
           FV++TDA G  +GA L+Q+ H +AYFSK     M ++ TY  E+ A+T+AV +WRQYLLG
Sbjct: 244 FVIQTDASGYAMGAVLIQQRHHLAYFSKVFCSRMMNASTYIHELHAITSAVKRWRQYLLG 303

Query: 370 HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVD- 194
           + FII+TD + LK L+ QVIQTP+QQ +L KLLG++++I+YKPG  N  ADALSR  +D 
Sbjct: 304 NYFIIQTDHKSLKELLTQVIQTPEQQHYLAKLLGYNYEIQYKPGNTNIVADALSRAIIDD 363

Query: 193 -ALYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRL 23
                A SV H++ LD+L+ +   D   + I+ KL++ P+ +  Y LKDGLLLYH R+
Sbjct: 364 SQTCYALSVPHVTFLDDLKRELASDSEFVSIYDKLRRDPSSVPGYKLKDGLLLYHDRI 421


>dbj|GAU11620.1| hypothetical protein TSUD_346120 [Trifolium subterraneum]
          Length = 1479

 Score =  173 bits (439), Expect = 1e-46
 Identities = 90/180 (50%), Positives = 123/180 (68%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            F++ETDA G GIGA L Q +HPIAYFSK+L    +    Y REM A+  A+AK+R YLLG
Sbjct: 868  FILETDASGIGIGAVLHQNNHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLG 927

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            H FIIRTDQ+ L+ LMEQ +QTPDQQ+WL K LG+DF IEYKPG++N AADALSR     
Sbjct: 928  HKFIIRTDQKSLRSLMEQSLQTPDQQEWLHKFLGYDFTIEYKPGKDNLAADALSR----M 983

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIPL 11
            +   +S    S + +++     D  ++EI  + +Q  T+ T Y+++DGLL +  R++IP+
Sbjct: 984  MCMGWSEPQCSWIQQIKTALQQDTTLMEIIQQCEQGQTN-THYTVRDGLLYWKHRIVIPV 1042


>dbj|GAU26218.1| hypothetical protein TSUD_354400 [Trifolium subterraneum]
          Length = 1332

 Score =  173 bits (438), Expect = 2e-46
 Identities = 88/179 (49%), Positives = 122/179 (68%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            F++ETDA GTG+GA L+Q+DHPI YFSK+    M  + TY RE+ A+T AV KWR YLLG
Sbjct: 768  FILETDASGTGMGAVLIQQDHPICYFSKQFCPRMVQASTYVRELCAITTAVKKWRTYLLG 827

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            + FII TDQ+ L+ LM QVIQTP+QQ +L KLLG+ ++I YKPG +N+ ADALSR H   
Sbjct: 828  NTFIIYTDQRSLRELMTQVIQTPEQQFYLAKLLGYSYEIVYKPGPQNRVADALSRVHC-- 885

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
               AF+V HL  +   + Q   D    ++  ++Q++P D  ++ + DGLL + G+L +P
Sbjct: 886  --LAFTVPHLDFITTFKQQLLQDDEFQQLLAQVQRQPHDHKDFKVIDGLLFFKGKLFLP 942


>gb|PNX80974.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 313

 Score =  164 bits (414), Expect = 2e-46
 Identities = 89/190 (46%), Positives = 122/190 (64%), Gaps = 12/190 (6%)
 Frame = -2

Query: 550 FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
           F++ETDA   GIGA L+Q  HP+AYFSK+L   M+S+  Y +E+ A+T AV KWRQYLLG
Sbjct: 16  FIIETDASNMGIGAVLMQDGHPLAYFSKKLGPQMQSASVYIKELHAITEAVLKWRQYLLG 75

Query: 370 HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSR----- 206
           H F+IRTD Q +K L++QVIQTPDQQK++ KLLGF F+IEYKPG  N+ ADALSR     
Sbjct: 76  HFFVIRTDHQSIKELLQQVIQTPDQQKYVRKLLGFQFRIEYKPGASNRVADALSRVPGEW 135

Query: 205 ----RHVDALYQAFSVT-HLSLLDELRNQANWDGFMIEIHLKLQQRPTDM--TEYSLKDG 47
                  D  + A   T    ++ +L+ +   D F++  H   QQ    +    YS+ +G
Sbjct: 136 SEADSPPDTSFMALVTTPTFGIVQQLQKENASDPFLLAFH---QQHTEGILPIPYSIING 192

Query: 46  LLLYHGRLII 17
           L+L+ GR ++
Sbjct: 193 LVLHKGRYVL 202


>gb|KYP39590.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
          Length = 1292

 Score =  172 bits (437), Expect = 2e-46
 Identities = 90/179 (50%), Positives = 116/179 (64%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            FV+ETDA G+GIGA L Q  HPIA+FSK+L   M     Y RE +A+T A+AK+R YLLG
Sbjct: 842  FVLETDASGSGIGAVLSQNKHPIAFFSKKLSNRMTKQSAYTREFYAITEAIAKFRHYLLG 901

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            H FIIRTDQ+ LK L++Q +QTP+QQ WL K LG+DF IEYKPG EN AADALSR    +
Sbjct: 902  HRFIIRTDQKSLKSLLDQTLQTPEQQAWLHKFLGYDFSIEYKPGTENLAADALSR----S 957

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
             + A +VT   L+ +++     D  +  I     Q       YS  DGLL + GR+++P
Sbjct: 958  FFMASAVTASDLVHQIKAALGSDTALQPILTAHSQGKALSAPYSFLDGLLFWKGRIVVP 1016


>gb|KYP39589.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
          Length = 1510

 Score =  172 bits (437), Expect = 2e-46
 Identities = 90/179 (50%), Positives = 116/179 (64%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            FV+ETDA G+GIGA L Q  HPIA+FSK+L   M     Y RE +A+T A+AK+R YLLG
Sbjct: 842  FVLETDASGSGIGAVLSQNKHPIAFFSKKLSNRMTKQSAYTREFYAITEAIAKFRHYLLG 901

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            H FIIRTDQ+ LK L++Q +QTP+QQ WL K LG+DF IEYKPG EN AADALSR    +
Sbjct: 902  HRFIIRTDQKSLKSLLDQTLQTPEQQAWLHKFLGYDFSIEYKPGTENLAADALSR----S 957

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
             + A +VT   L+ +++     D  +  I     Q       YS  DGLL + GR+++P
Sbjct: 958  FFMASAVTASDLVHQIKAALGSDTALQPILTAHSQGKALSAPYSFLDGLLFWKGRIVVP 1016


>dbj|GAU25204.1| hypothetical protein TSUD_151040 [Trifolium subterraneum]
          Length = 1512

 Score =  172 bits (437), Expect = 2e-46
 Identities = 88/180 (48%), Positives = 119/180 (66%)
 Frame = -2

Query: 553  TFVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLL 374
            TF++ETDA G GIGA L Q  HPIAYFSK+L    +    Y REM A+  A+AK+R YLL
Sbjct: 867  TFILETDASGVGIGAVLHQEGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLL 926

Query: 373  GHCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVD 194
            GH FIIRTDQ+ L+ LMEQ +QTPDQQ+WL + LG+DF IEYKPG++N  ADALSR    
Sbjct: 927  GHKFIIRTDQKSLRNLMEQTLQTPDQQEWLHRFLGYDFSIEYKPGKDNVVADALSR---- 982

Query: 193  ALYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
             +  A+S     LL +++     D  +++I ++  Q     + Y++KD LL +  R++IP
Sbjct: 983  VMTLAWSEPQFRLLHQIKAIQKQDPTLVKIRMECAQHSQPGSHYTIKDDLLFWKQRIVIP 1042


>dbj|GAU43714.1| hypothetical protein TSUD_179970 [Trifolium subterraneum]
          Length = 1291

 Score =  172 bits (436), Expect = 3e-46
 Identities = 88/179 (49%), Positives = 121/179 (67%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            F +ETDA GTGIGA L Q+ HPIAYFSK+L    +    Y RE+ A+T A+AK+R YLLG
Sbjct: 714  FTLETDASGTGIGAVLGQKGHPIAYFSKKLSPRRQKQSAYIRELLAITEALAKFRHYLLG 773

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            H F+I+TDQ+ LK L++Q +QTP+QQ WL K +GFDFKIEYKPG++N  ADALSR ++  
Sbjct: 774  HKFVIKTDQKSLKSLLDQTLQTPEQQVWLHKFIGFDFKIEYKPGKDNIPADALSRMYL-- 831

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
               A+S      L EL+   + D  + +I    Q +  +   YS+K+GLLL+  +L++P
Sbjct: 832  --LAWSEPKSKFLQELQTVVHQDAELQQIITGCQHKEEEYKLYSVKEGLLLWKDKLVVP 888


>gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1535

 Score =  172 bits (436), Expect = 3e-46
 Identities = 92/179 (51%), Positives = 120/179 (67%)
 Frame = -2

Query: 550  FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
            F++ETDA G GIGA L Q+ HPIAYFSK+L    +    Y REM A+  A+AK+R YLLG
Sbjct: 869  FILETDASGVGIGAVLHQQGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLG 928

Query: 370  HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
            H FIIRTDQ+ L+ LMEQ +QTPDQQ+WL K LG+DF IEYKPG+EN AADALSR     
Sbjct: 929  HKFIIRTDQKSLRSLMEQSLQTPDQQEWLHKFLGYDFTIEYKPGKENMAADALSR----I 984

Query: 190  LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIP 14
            +  ++S      ++++R     D  M EI +K       + +YS++DGLL +  RL+IP
Sbjct: 985  MTLSWSEPKCQFIEQIRVALQNDNQMREILMKCNAGKAPV-QYSMRDGLLYWKQRLVIP 1042


>gb|PNX73110.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 937

 Score =  171 bits (434), Expect = 5e-46
 Identities = 91/181 (50%), Positives = 121/181 (66%)
 Frame = -2

Query: 550 FVVETDALGTGIGATLLQRDHPIAYFSKRLPQSMRSSLTYKREMFAVTAAVAKWRQYLLG 371
           F++ETDA G GIGA L Q  HPIAYFSK+L    +    Y REM A+  A+AK+R YLLG
Sbjct: 329 FILETDASGVGIGAVLHQEGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLG 388

Query: 370 HCFIIRTDQQCLKCLMEQVIQTPDQQKWLTKLLGFDFKIEYKPGRENQAADALSRRHVDA 191
           H FIIRTDQ+ L+ LMEQ +QTP+QQ+WL K LG+DF IEYKPG+EN AADALSR     
Sbjct: 389 HKFIIRTDQKSLRSLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKENMAADALSR----L 444

Query: 190 LYQAFSVTHLSLLDELRNQANWDGFMIEIHLKLQQRPTDMTEYSLKDGLLLYHGRLIIPL 11
           +  A+S      +++++     D  M+EI LK       + +Y++++GLL +  RL+IP 
Sbjct: 445 MTLAWSEPQCQFIEQVKLALQNDNQMMEIMLKCASGKAPI-QYTMREGLLYWKQRLVIPK 503

Query: 10  Q 8
           Q
Sbjct: 504 Q 504