BLASTX nr result

ID: Rehmannia29_contig00033843 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00033843
         (1209 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011072964.2| psbP-like protein 1, chloroplastic [Sesamum ...    66   3e-08

>ref|XP_011072964.2| psbP-like protein 1, chloroplastic [Sesamum indicum]
          Length = 355

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -1

Query: 111 TSMTDRPGRRQLLAMGTTIAPWLFFCQQAPTTFAAE 4
           +S  DRPGRRQLLAMGTT+APWLFF QQ PTTFAAE
Sbjct: 165 SSCEDRPGRRQLLAMGTTLAPWLFFSQQTPTTFAAE 200


Top