BLASTX nr result

ID: Rehmannia29_contig00033794 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00033794
         (500 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV58822.1| nuclear poly(A) polymerase 4-like [Dorcoceras hyg...    57   3e-06

>gb|KZV58822.1| nuclear poly(A) polymerase 4-like [Dorcoceras hygrometricum]
          Length = 770

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
 Frame = +2

Query: 257 NSSAREIRICFILIQFMKK*CPRVKILKT-WTGP----LTFDVYHSITELEVDIIAFDLD 421
           N SA  +R+     QF KK C  +++ KT W+      L F+ Y +   L+VDI+A DLD
Sbjct: 333 NVSASTLRVMSEQFQFGKKICEDIELNKTQWSTLFEPYLFFESYKNY--LQVDIVAADLD 390

Query: 422 DLRI*RGWDESRLWQLSLMVD 484
           DLR  RGW ESRL QL+LM++
Sbjct: 391 DLRAWRGWVESRLRQLTLMIE 411


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