BLASTX nr result
ID: Rehmannia29_contig00033565
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00033565
(424 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica] 64 2e-15
gb|AMY96445.1| gag/pol protein [Momordica dioica] 60 6e-14
gb|PKU62438.1| Retrovirus-related Pol polyprotein from transposo... 54 2e-13
gb|PKI53605.1| hypothetical protein CRG98_025996 [Punica granatum] 53 1e-12
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 56 2e-12
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 56 2e-12
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 54 4e-12
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group] 51 4e-12
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 54 5e-12
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc... 51 9e-12
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 54 1e-11
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 54 1e-11
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 54 1e-11
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 54 2e-11
gb|PKI72506.1| hypothetical protein CRG98_007109 [Punica granatum] 52 3e-11
gb|PKI40164.1| hypothetical protein CRG98_039447 [Punica granatum] 50 3e-11
ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207... 54 4e-11
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 49 4e-11
gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escher... 49 5e-11
gb|PNX87842.1| retrotransposon protein putative Ty1-copia subcla... 50 5e-11
>gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]
Length = 1292
Score = 63.5 bits (153), Expect(2) = 2e-15
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +1
Query: 1 NKLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQ 180
NK LA+SQASYIDK+ +MQ+SKKG LP +G+ LSKE+C KTPQE P
Sbjct: 1048 NKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSA 1107
Query: 181 VYNIVY 198
V +++Y
Sbjct: 1108 VGSLMY 1113
Score = 46.2 bits (108), Expect(2) = 2e-15
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR I Y++GI S++QSNP H VKN+LKY+
Sbjct: 1113 YAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYL 1151
>gb|AMY96445.1| gag/pol protein [Momordica dioica]
Length = 1313
Score = 60.5 bits (145), Expect(2) = 6e-14
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 1 NKLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQ 180
NK + +SQ++YIDK+ +MQDSKKG LP +G+ LSKE+C KTPQE P
Sbjct: 1064 NKTIGMSQSTYIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSA 1123
Query: 181 VYNIVY 198
+ +++Y
Sbjct: 1124 IGSLMY 1129
Score = 44.3 bits (103), Expect(2) = 6e-14
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR + YA+ I S++QSNP H VKN+LKY+
Sbjct: 1129 YAMLCTRPDVCYALSIVSRYQSNPGRDHWTAVKNILKYL 1167
>gb|PKU62438.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 402
Score = 54.3 bits (129), Expect(2) = 2e-13
Identities = 26/47 (55%), Positives = 37/47 (78%)
Frame = +1
Query: 1 NKLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQ 141
NK+LALSQA YI+K+ + MQ+SKKG +P+ +GV LSK++C +T Q
Sbjct: 134 NKILALSQAFYIEKILIRFEMQNSKKGNMPSCHGVYLSKKQCPQTKQ 180
Score = 48.5 bits (114), Expect(2) = 2e-13
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y ILCTR I Y +GI S++QSNP FH + VK++ KY+
Sbjct: 187 YVILCTRPDICYVVGIVSRYQSNPGRFHWVAVKHIFKYL 225
>gb|PKI53605.1| hypothetical protein CRG98_025996 [Punica granatum]
Length = 445
Score = 52.8 bits (125), Expect(2) = 1e-12
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
YT+LCTR I YAI +TS++QSNPE+ H VKN+LKY+
Sbjct: 288 YTMLCTRPDITYAISVTSRYQSNPELDHWTAVKNILKYL 326
Score = 47.8 bits (112), Expect(2) = 1e-12
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQA Y+DK+ MQ+S++G LP +G+ LSK LKTP++ P +
Sbjct: 224 RLIGLSQALYLDKVLKRFNMQNSRRGLLPVRHGIHLSKGMSLKTPEDREKMAQVPYASAI 283
Query: 184 YNIVY 198
+++Y
Sbjct: 284 GSLMY 288
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 55.8 bits (133), Expect(2) = 2e-12
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LS+++YIDK+ MQDSKKG+LP +G+ L+K +CL+T E+ P +
Sbjct: 962 RLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAI 1021
Query: 184 YNIVY 198
+I+Y
Sbjct: 1022 GSIMY 1026
Score = 43.5 bits (101), Expect(2) = 2e-12
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR + Y + TS++QS+P H I VKN+LKY+
Sbjct: 1026 YAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYL 1064
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 55.8 bits (133), Expect(2) = 2e-12
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LS+++YIDK+ MQDSKKG+LP +G+ L+K +CL+T E+ P +
Sbjct: 904 RLIGLSESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAI 963
Query: 184 YNIVY 198
+I+Y
Sbjct: 964 GSIMY 968
Score = 43.5 bits (101), Expect(2) = 2e-12
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR + Y + TS++QS+P H I VKN+LKY+
Sbjct: 968 YAMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYL 1006
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gb|ABA93176.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 938
Score = 53.9 bits (128), Expect(2) = 4e-12
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQ++YIDK+ MQDSKKG+LP +G+ L K +C +T E P +
Sbjct: 758 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTNERNKMSVIPYASAI 817
Query: 184 YNIVY 198
+I+Y
Sbjct: 818 GSIMY 822
Score = 44.7 bits (104), Expect(2) = 4e-12
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR + YA+ TSQ+QS+P H I +KN+LKY+
Sbjct: 822 YAMLCTRPDVSYALSATSQYQSDPGESHWIALKNILKYL 860
>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 51.2 bits (121), Expect(2) = 4e-12
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQ++YIDK+ MQDSKKG+LP YG+ L K + +T E P +
Sbjct: 736 RLVGLSQSTYIDKVLKRFNMQDSKKGFLPMSYGINLGKNQYPQTTDERNKMSVIPYASAI 795
Query: 184 YNIVY 198
+I+Y
Sbjct: 796 GSIMY 800
Score = 47.4 bits (111), Expect(2) = 4e-12
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTRL + YA+ +T+++QS+P H I VKN+LKY+
Sbjct: 800 YAMLCTRLDVSYALSVTNRYQSDPGESHWIAVKNILKYL 838
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 53.9 bits (128), Expect(2) = 5e-12
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQ++YIDK+ MQDSKKG+LP +G+ L K +C +T E P +
Sbjct: 910 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 969
Query: 184 YNIVY 198
+I+Y
Sbjct: 970 GSIMY 974
Score = 44.3 bits (103), Expect(2) = 5e-12
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR + YA+ TS++QS+P H I VKN+LKY+
Sbjct: 974 YAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYL 1012
>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 51.2 bits (121), Expect(2) = 9e-12
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQ++YIDK+ MQDSKKG+LP +G+ K +C +T E P +
Sbjct: 1503 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINHGKNQCPQTTDERNKMSVIPYAWAI 1562
Query: 184 YNIVY 198
+I+Y
Sbjct: 1563 GSIMY 1567
Score = 46.2 bits (108), Expect(2) = 9e-12
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR+ + YA+ TS++QS+P H I VKN+LKY+
Sbjct: 1567 YAMLCTRIDVSYALSATSRYQSDPGESHWIAVKNILKYL 1605
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 53.9 bits (128), Expect(2) = 1e-11
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+++ LSQA YID + MQ SKKG+LP +G+VLSK++ KTP+E + A P V
Sbjct: 1006 RMIGLSQALYIDTILNRFNMQGSKKGFLPFRHGIVLSKDQSPKTPEEIESMKAVPYASAV 1065
Query: 184 YNIVY 198
+++Y
Sbjct: 1066 GSLMY 1070
Score = 43.1 bits (100), Expect(2) = 1e-11
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR I +A+G+ S+FQSNP H VK+++KY+
Sbjct: 1070 YAMLCTRPDIYFAVGMVSRFQSNPGREHWTAVKHIIKYL 1108
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 53.9 bits (128), Expect(2) = 1e-11
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQ++YIDK+ MQDSKKG+LP +G+ L K +C +T E P +
Sbjct: 988 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 1047
Query: 184 YNIVY 198
+I+Y
Sbjct: 1048 GSIMY 1052
Score = 43.1 bits (100), Expect(2) = 1e-11
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTRL + YA+ TS++QS+ H I VKN+LKY+
Sbjct: 1052 YAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYL 1090
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 53.9 bits (128), Expect(2) = 1e-11
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQ++YIDK+ MQDSKKG+LP +G+ L K +C +T E P +
Sbjct: 901 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 960
Query: 184 YNIVY 198
+I+Y
Sbjct: 961 GSIMY 965
Score = 43.1 bits (100), Expect(2) = 1e-11
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTRL + YA+ TS++QS+ H I VKN+LKY+
Sbjct: 965 YAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYL 1003
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 53.9 bits (128), Expect(2) = 2e-11
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQ++YIDK+ MQDSKKG+LP +G+ L K +C +T E P +
Sbjct: 773 RLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAI 832
Query: 184 YNIVY 198
+I+Y
Sbjct: 833 GSIMY 837
Score = 42.4 bits (98), Expect(2) = 2e-11
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCT + YA+ TS++QS+P H I VKN+LKY+
Sbjct: 837 YAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYL 875
>gb|PKI72506.1| hypothetical protein CRG98_007109 [Punica granatum]
Length = 783
Score = 51.6 bits (122), Expect(2) = 3e-11
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +1
Query: 1 NKLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQ 180
N+LL LSQ++YIDK+ MQDSKKG LP +G+ LSK + T +E + P
Sbjct: 515 NRLLGLSQSAYIDKVLWRFSMQDSKKGSLPMLHGISLSKAQSPSTREERDRINRIPYASA 574
Query: 181 VYNIVY 198
+ +I+Y
Sbjct: 575 IGSIMY 580
Score = 43.9 bits (102), Expect(2) = 3e-11
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR + Y + +TS++QS+P H I VKN+LKY+
Sbjct: 580 YAMLCTRSNVSYTLSMTSRYQSDPGERHWIAVKNILKYL 618
>gb|PKI40164.1| hypothetical protein CRG98_039447 [Punica granatum]
Length = 263
Score = 50.1 bits (118), Expect(2) = 3e-11
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR I YA+ +TS++QSNP + H I VKN+LKY+
Sbjct: 177 YAMLCTRPDIAYAVSVTSEYQSNPGLDHWIAVKNILKYL 215
Score = 45.4 bits (106), Expect(2) = 3e-11
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+L+ LSQ Y+DK+ MQDSK+G LP +G+ L K KTP+E P +
Sbjct: 113 RLIGLSQTLYLDKVLKRFNMQDSKRGLLPMRHGIHLFKAMSPKTPEEREEMAQVPYASAI 172
Query: 184 YNIVY 198
+++Y
Sbjct: 173 GSLMY 177
>ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
carota subsp. sativus]
Length = 3860
Score = 53.5 bits (127), Expect(2) = 4e-11
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
++LALSQ YID + MQDSKKG LP +GV LSK +C TP+E A P
Sbjct: 1191 RMLALSQEPYIDDVLARFNMQDSKKGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASAC 1250
Query: 184 YNIVY 198
+++Y
Sbjct: 1251 GSLMY 1255
Score = 53.5 bits (127), Expect(2) = 4e-11
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
++LALSQ YID + MQDSKKG LP +GV LSK +C TP+E A P
Sbjct: 2406 RMLALSQEPYIDDVLARFNMQDSKKGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASAC 2465
Query: 184 YNIVY 198
+++Y
Sbjct: 2466 GSLMY 2470
Score = 53.5 bits (127), Expect(2) = 4e-11
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
++LALSQ YID + MQDSKKG LP +GV LSK +C TP+E A P
Sbjct: 3621 RMLALSQEPYIDDVLARFNMQDSKKGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASAC 3680
Query: 184 YNIVY 198
+++Y
Sbjct: 3681 GSLMY 3685
Score = 41.6 bits (96), Expect(2) = 4e-11
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR I +A+G+ S++QSNP H VK +LKY+
Sbjct: 1255 YAMLCTRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYL 1293
Score = 41.6 bits (96), Expect(2) = 4e-11
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR I +A+G+ S++QSNP H VK +LKY+
Sbjct: 2470 YAMLCTRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYL 2508
Score = 41.6 bits (96), Expect(2) = 4e-11
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR I +A+G+ S++QSNP H VK +LKY+
Sbjct: 3685 YAMLCTRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYL 3723
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 49.3 bits (116), Expect(2) = 4e-11
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +1
Query: 19 SQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQVYNIVY 198
SQ++YIDK+ MQDSKKG+LP +G+ L K +C +T E P + +I+Y
Sbjct: 668 SQSTYIDKVLKRFNMQDSKKGFLPLSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMY 727
Score = 45.8 bits (107), Expect(2) = 4e-11
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR + YA+ TSQ+QS+P H I VKN+LKY+
Sbjct: 727 YAMLCTRPDVPYALSATSQYQSDPGESHWIAVKNILKYL 765
>gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escherichia coli]
Length = 859
Score = 49.3 bits (116), Expect(2) = 5e-11
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
Y +LCTR I YA+ +TS++QSNP + H I +KN+LKY+
Sbjct: 704 YAMLCTRPNIAYAVSLTSRYQSNPGLEHWIAIKNILKYL 742
Score = 45.4 bits (106), Expect(2) = 5e-11
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+++ LSQ+ Y++K+ M DSK+G LP +G+ LSKE KTP+E P +
Sbjct: 640 RIIGLSQSLYLEKVLKRFNMLDSKRGLLPVRHGIHLSKEMSPKTPEERDKMARIPYASAI 699
Query: 184 YNIVY 198
+++Y
Sbjct: 700 GSLMY 704
>gb|PNX87842.1| retrotransposon protein putative Ty1-copia subclass, partial
[Trifolium pratense]
Length = 511
Score = 49.7 bits (117), Expect(2) = 5e-11
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +1
Query: 4 KLLALSQASYIDKMQLH*RMQDSKKGYLPT*YGVVLSKEECLKTPQEERT*DAFPMPLQV 183
+LL LSQ+ YID + M+ SK+GYLP GV LS+E C KT +E P V
Sbjct: 337 RLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGVSLSRENCPKTLEERERMSRVPYASAV 396
Query: 184 YNIVY 198
I+Y
Sbjct: 397 GAIMY 401
Score = 45.1 bits (105), Expect(2) = 5e-11
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 182 YTILCTRLGI*YAIGITSQFQSNPEMFH*IIVKNLLKYV 298
YT+ CTR + YA+G+TS++Q+NP H +VK +LKY+
Sbjct: 401 YTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYL 439