BLASTX nr result
ID: Rehmannia29_contig00033315
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00033315
(494 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PON55798.1| hypothetical protein PanWU01x14_186070, partial [... 91 5e-21
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 94 3e-19
gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposo... 87 6e-17
gb|EXB36808.1| hypothetical protein L484_007870 [Morus notabilis] 82 6e-17
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 87 1e-16
gb|EXC27156.1| hypothetical protein L484_000603 [Morus notabilis] 80 3e-15
gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica] 67 3e-13
gb|EXB94191.1| Serine/threonine-protein kinase ATM [Morus notabi... 75 1e-12
pir||B47758 retrovirus-related reverse transcriptase homolog - P... 67 1e-12
gb|EXC12619.1| hypothetical protein L484_012997 [Morus notabilis] 68 6e-12
gb|AMY96445.1| gag/pol protein [Momordica dioica] 66 2e-11
gb|PKU62438.1| Retrovirus-related Pol polyprotein from transposo... 69 4e-11
gb|EXC25220.1| hypothetical protein L484_003433 [Morus notabilis] 67 2e-10
gb|AGX45509.1| reverse transcriptase, partial [Prunus salicina] 64 3e-10
dbj|BAB83552.1| reverse transcriptase, partial [Silene coronaria] 63 4e-10
dbj|BAB83560.1| reverse transcriptase, partial [Silene dioica] 63 4e-10
gb|EXC11736.1| hypothetical protein L484_020791 [Morus notabilis] 67 4e-10
emb|CAE04255.4| OSJNBa0089N06.16 [Oryza sativa Japonica Group] 51 6e-10
ref|XP_012833184.1| PREDICTED: uncharacterized protein LOC105954... 62 6e-10
dbj|BAB83556.1| reverse transcriptase, partial [Silene vulgaris] 63 6e-10
>gb|PON55798.1| hypothetical protein PanWU01x14_186070, partial [Parasponia
andersonii]
Length = 77
Score = 90.9 bits (224), Expect = 5e-21
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +3
Query: 27 IRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDGVDDDLLSF 206
IRPQPT VV TTIP+QN + R SGRVIRPP RYR++GEA+ A+ D DDLL++
Sbjct: 1 IRPQPTTVVERQNYETTIPDQNTLATRCSGRVIRPPARYREVGEAHVAISDSSQDDLLTY 60
Query: 207 RQVMEDYDIARWLEAM 254
+ +MED D +W EAM
Sbjct: 61 KHIMEDSDKEKWQEAM 76
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 94.0 bits (232), Expect = 3e-19
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LEELL+DEI P PT VV K TT + PRRSGR IR PIRYR+ GEA AV DG
Sbjct: 81 LEELLADEISPTPTTVVERQRKETTAQDLTPPPPRRSGREIRLPIRYRENGEAQVAVTDG 140
Query: 183 VDDDLLSFRQVMEDYDIARWLEAMNQEMDS 272
DDD L+F+ M+D D +W EAM E++S
Sbjct: 141 SDDDPLTFKMAMDDVDREKWQEAMKLEIES 170
Score = 64.3 bits (155), Expect(2) = 5e-12
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSW 397
+P GFV + QEQKVCKL RSIYGLKQASRSWN F+E IKS+
Sbjct: 274 QPEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSY 315
Score = 33.9 bits (76), Expect(2) = 5e-12
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 390 SLGFDQSVDEPCVYKQINDGKV 455
S GF+Q++ EPCVYKQI KV
Sbjct: 314 SYGFEQNLGEPCVYKQIGGDKV 335
>gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 414
Score = 87.0 bits (214), Expect = 6e-17
Identities = 47/92 (51%), Positives = 58/92 (63%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LEELLSDEIRPQPTRVVG + + T +P+Q +M PRRS RV R P RY GEA D
Sbjct: 220 LEELLSDEIRPQPTRVVGPLRQKTIVPDQTLMAPRRSRRVSRLPDRY--TGEAQIVTADD 277
Query: 183 VDDDLLSFRQVMEDYDIARWLEAMNQEMDSNH 278
+D +FR M+D + W AM E++S H
Sbjct: 278 GKEDPSTFRDAMDDSNKEEWQAAMKLEIESMH 309
>gb|EXB36808.1| hypothetical protein L484_007870 [Morus notabilis]
Length = 145
Score = 82.4 bits (202), Expect = 6e-17
Identities = 45/92 (48%), Positives = 54/92 (58%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LEELLSDEI P PTRVVG + + TT+P+Q P RSGRV P RY GEA D
Sbjct: 52 LEELLSDEIGPHPTRVVGPLREKTTVPDQTPKAPHRSGRVSMLPDRY--TGEAQIVTTDD 109
Query: 183 VDDDLLSFRQVMEDYDIARWLEAMNQEMDSNH 278
+D +F+ M+D D W AM EM+S H
Sbjct: 110 GKEDPSTFKDAMDDSDKEEWQAAMKLEMESMH 141
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 86.7 bits (213), Expect = 1e-16
Identities = 48/90 (53%), Positives = 56/90 (62%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LEELL+DEI P PT VV K TT + PR SGR IR PIRY + GEA AV DG
Sbjct: 517 LEELLADEISPTPTTVVERQRKETTARDLTPPPPRCSGREIRLPIRYCENGEAQVAVTDG 576
Query: 183 VDDDLLSFRQVMEDYDIARWLEAMNQEMDS 272
DDD L+F+ M+D D W EAM E++S
Sbjct: 577 SDDDSLTFKMAMDDVDRETWQEAMKLEIES 606
Score = 65.1 bits (157), Expect = 4e-09
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = +2
Query: 281 GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSW 397
GFV + QEQKVCKL RSIYGLKQASRSWN RF E IKS+
Sbjct: 713 GFVVKDQEQKVCKLQRSIYGLKQASRSWNIRFSEAIKSY 751
>gb|EXC27156.1| hypothetical protein L484_000603 [Morus notabilis]
Length = 246
Score = 80.5 bits (197), Expect = 3e-15
Identities = 45/90 (50%), Positives = 54/90 (60%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LEELLSDEI PQPTRVVG + + TT+P+Q PRRSGRV P RY GEA D
Sbjct: 124 LEELLSDEIGPQPTRVVGPLREKTTVPDQIPKAPRRSGRVSILPDRYN--GEAQIVTADD 181
Query: 183 VDDDLLSFRQVMEDYDIARWLEAMNQEMDS 272
+D +F+ M+D D W M EM+S
Sbjct: 182 GKEDPSTFKDAMDDSDKEEWQVTMKLEMES 211
>gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]
Length = 1292
Score = 67.4 bits (163), Expect(2) = 3e-13
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSW 397
+P GF+A+ QEQKVCKL +SIYGLKQASRSWN RFD IKS+
Sbjct: 934 QPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSY 975
Score = 35.0 bits (79), Expect(2) = 3e-13
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 390 SLGFDQSVDEPCVYKQINDGKVA 458
S GF+Q+VDEPCVYK+I + VA
Sbjct: 974 SYGFEQNVDEPCVYKKIVNSVVA 996
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +3
Query: 84 NQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDGVDDDLLSFRQVMEDYDIARWLEAMNQE 263
+Q + +PRRSGRV+ P RY + E + D +D L+++Q M D D +W++AMN E
Sbjct: 768 SQELRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLE 827
Query: 264 MDS 272
M+S
Sbjct: 828 MES 830
>gb|EXB94191.1| Serine/threonine-protein kinase ATM [Morus notabilis]
Length = 1438
Score = 75.5 bits (184), Expect = 1e-12
Identities = 41/90 (45%), Positives = 55/90 (61%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LE+LL ++I PQPTRVV + TTIPNQ + RSGRV + P RY GEA D
Sbjct: 1316 LEKLLFNKIGPQPTRVVRTLRDKTTIPNQTPLARHRSGRVSKLPNRY--TGEAQIVTVDD 1373
Query: 183 VDDDLLSFRQVMEDYDIARWLEAMNQEMDS 272
+D L+F+ M+D+D +W AM E++S
Sbjct: 1374 GKEDPLTFKAAMDDFDKEKWQAAMKLEIES 1403
>pir||B47758 retrovirus-related reverse transcriptase homolog - Platanus
occidentalis retrotransposon copia-like (fragment)
gb|AAA33850.1| reverse transcriptase, partial [Platanus occidentalis]
Length = 88
Score = 66.6 bits (161), Expect(2) = 1e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSW 397
+P GFV GQE KVCKL RSIYGLKQASRSWN RFD+ IKS+
Sbjct: 17 QPKGFVYPGQESKVCKLERSIYGLKQASRSWNIRFDQAIKSF 58
Score = 33.9 bits (76), Expect(2) = 1e-12
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 390 SLGFDQSVDEPCVYKQINDGKV 455
S GF+Q+ +EPCVYK++N+ V
Sbjct: 57 SFGFEQNPEEPCVYKKVNENAV 78
>gb|EXC12619.1| hypothetical protein L484_012997 [Morus notabilis]
Length = 94
Score = 68.2 bits (165), Expect = 6e-12
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LE+LLS++I PQPTRVV ++ + TTIPNQ ++ PRRSGRV + P RY + +A D
Sbjct: 19 LEKLLSNKIGPQPTRVVEKL-RMTTIPNQTLVAPRRSGRVSKLPDRYTE--KAQIVTVDD 75
Query: 183 VDDDLLSFRQVMEDYD 230
+D L+F+ M+D+D
Sbjct: 76 GKEDPLTFKATMDDFD 91
>gb|AMY96445.1| gag/pol protein [Momordica dioica]
Length = 1313
Score = 66.2 bits (160), Expect(2) = 2e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSW 397
+P GFVA+ QEQK CKL SIYGLKQASRSWN RFDE+IK++
Sbjct: 950 QPEGFVAQDQEQKACKLQGSIYGLKQASRSWNIRFDEVIKAF 991
Score = 30.0 bits (66), Expect(2) = 2e-11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 390 SLGFDQSVDEPCVYKQINDGKVA 458
+ GF Q+VDE CVYK+I+ VA
Sbjct: 990 AFGFIQNVDESCVYKKISGSVVA 1012
>gb|PKU62438.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 402
Score = 68.6 bits (166), Expect(2) = 4e-11
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 281 GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIK 391
GF+ EGQEQKVCKL RSIYGLKQASRSWN RFDE IK
Sbjct: 23 GFIIEGQEQKVCKLQRSIYGLKQASRSWNIRFDEAIK 59
Score = 26.6 bits (57), Expect(2) = 4e-11
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 396 GFDQSVDEPCVYK 434
GFDQS++E CVYK
Sbjct: 62 GFDQSLNEHCVYK 74
>gb|EXC25220.1| hypothetical protein L484_003433 [Morus notabilis]
Length = 231
Score = 67.0 bits (162), Expect = 2e-10
Identities = 37/76 (48%), Positives = 46/76 (60%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LEELLSD+I PQP RVVG + +T+P+Q M P SGRV R P RY GEA D
Sbjct: 155 LEELLSDKIGPQPARVVGPRREKSTVPDQTPMAPHHSGRVSRLPDRY--TGEAQIITADD 212
Query: 183 VDDDLLSFRQVMEDYD 230
+D +F+ M+D D
Sbjct: 213 GKEDPSNFKDAMDDSD 228
>gb|AGX45509.1| reverse transcriptase, partial [Prunus salicina]
Length = 88
Score = 63.5 bits (153), Expect = 3e-10
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSW 397
+P GF+++ + KVCKL RSIYGLKQASRSWN RFDE IKS+
Sbjct: 16 QPEGFISKTESHKVCKLQRSIYGLKQASRSWNLRFDEAIKSF 57
>dbj|BAB83552.1| reverse transcriptase, partial [Silene coronaria]
Length = 92
Score = 63.2 bits (152), Expect(2) = 4e-10
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIK 391
+P GFV +KVCKL RSIYGLKQASRSWNHRFD +IK
Sbjct: 21 QPEGFVDTSNPKKVCKLKRSIYGLKQASRSWNHRFDHVIK 60
Score = 28.9 bits (63), Expect(2) = 4e-10
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 396 GFDQSVDEPCVYKQINDGKVA 458
GF +SV+EPC+Y + + KVA
Sbjct: 63 GFARSVEEPCLYMKFSGSKVA 83
>dbj|BAB83560.1| reverse transcriptase, partial [Silene dioica]
Length = 92
Score = 62.8 bits (151), Expect(2) = 4e-10
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSW 397
+P GFV +KVCKL +SIYGLKQASRSWNHRFD +IK +
Sbjct: 21 QPEGFVDTSNPKKVCKLKKSIYGLKQASRSWNHRFDHIIKQY 62
Score = 29.3 bits (64), Expect(2) = 4e-10
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 396 GFDQSVDEPCVYKQINDGKVA 458
GF +SV+EPC+Y + + KVA
Sbjct: 63 GFTRSVEEPCLYMKFSGSKVA 83
>gb|EXC11736.1| hypothetical protein L484_020791 [Morus notabilis]
Length = 330
Score = 67.4 bits (163), Expect = 4e-10
Identities = 38/84 (45%), Positives = 48/84 (57%)
Frame = +3
Query: 3 LEELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIRYRQIGEANAAVFDG 182
LEELLSDEI P PTRVV + + TT+P+Q P RSGRV P RY GEA D
Sbjct: 247 LEELLSDEIGPHPTRVVRPLREKTTVPDQIPKAPHRSGRVSMLPDRY--TGEAQIVTADD 304
Query: 183 VDDDLLSFRQVMEDYDIARWLEAM 254
+D +F+ +++ D W AM
Sbjct: 305 SKEDPSTFKDAIDNSDKEEWQAAM 328
>emb|CAE04255.4| OSJNBa0089N06.16 [Oryza sativa Japonica Group]
Length = 1196
Score = 51.2 bits (121), Expect(2) = 6e-10
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSW 397
+P GFV +G E C+L RSIYGLKQASR W +FD IK +
Sbjct: 859 QPKGFVMKGNENMGCRLKRSIYGLKQASRQWYLKFDGTIKKF 900
Score = 40.0 bits (92), Expect(2) = 6e-10
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 6 EELLSDEIRPQPTRVVGEIAKNTTIPNQNVMIPRRSGRVIRPPIR--YR--QIGEANAAV 173
EEL +I P + + + +PN V PRRS RV R IR Y+ I E++
Sbjct: 737 EELQQPQIDNVPVQETHQEPQVQDVPN--VQAPRRSERVRRSAIRDDYKVYNIEESH--- 791
Query: 174 FDGVDDDLLSFRQVMEDYDIARWLEAMNQEMDS 272
++DD S+ + M + WLEAM EM+S
Sbjct: 792 ---MEDDPTSYEEAMRSARSSEWLEAMKDEMES 821
>ref|XP_012833184.1| PREDICTED: uncharacterized protein LOC105954060 [Erythranthe
guttata]
Length = 349
Score = 62.0 bits (149), Expect(2) = 6e-10
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIKSWF*PKC 412
+P GF+A+GQE VCKL +SIYGLKQASRSWN RFD+ I + +C
Sbjct: 144 QPDGFMAKGQEHMVCKLKKSIYGLKQASRSWNIRFDQAISYFGFDQC 190
Score = 29.3 bits (64), Expect(2) = 6e-10
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 387 SSLGFDQSVDEPCVYKQI 440
S GFDQ DEPC YK+I
Sbjct: 183 SYFGFDQCPDEPCKYKRI 200
>dbj|BAB83556.1| reverse transcriptase, partial [Silene vulgaris]
Length = 92
Score = 62.8 bits (151), Expect = 6e-10
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2
Query: 272 EP*GFVAEGQEQKVCKLLRSIYGLKQASRSWNHRFDEMIK 391
+P GF+ +KVCKL RSIYGLKQASRSWNHRFD++IK
Sbjct: 21 QPEGFIDPKHPKKVCKLKRSIYGLKQASRSWNHRFDQVIK 60