BLASTX nr result

ID: Rehmannia29_contig00033186 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00033186
         (922 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN03686.1| (R)-limonene synthase [Handroanthus impetiginosus]      62   7e-07

>gb|PIN03686.1| (R)-limonene synthase [Handroanthus impetiginosus]
          Length = 606

 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 38/79 (48%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
 Frame = -1

Query: 256 RTNNHF-TF---------VCSINGASICLRRCSSQCKA*SACDDQIIPTRRRSENYNPAT 107
           RTNN+  TF         V S   A+  LRRCS +C A     D   PTRRRS NY PA 
Sbjct: 13  RTNNYLCTFDRKAPKQWCVSSTTVAAAGLRRCSFKCNAKPYDHDHHAPTRRRSGNYKPAL 72

Query: 106 WDFDFIQPLSSE*IQGIYL 50
           WDFD++Q LSSE  +  YL
Sbjct: 73  WDFDYVQSLSSEYAEERYL 91


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