BLASTX nr result
ID: Rehmannia29_contig00032891
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00032891
(829 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OAY69787.1| Cleavage and polyadenylation specificity factor s... 61 4e-08
ref|XP_020554245.1| cleavage and polyadenylation specificity fac... 65 5e-08
ref|XP_011098509.1| cleavage and polyadenylation specificity fac... 65 5e-08
ref|XP_011098501.1| cleavage and polyadenylation specificity fac... 65 5e-08
ref|XP_015073611.1| PREDICTED: cleavage and polyadenylation spec... 65 5e-08
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 65 6e-08
ref|XP_010319559.1| PREDICTED: cleavage and polyadenylation spec... 65 6e-08
ref|XP_004956755.1| cleavage and polyadenylation specificity fac... 64 6e-08
emb|CDP16291.1| unnamed protein product [Coffea canephora] 64 7e-08
ref|XP_015895381.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 64 7e-08
ref|XP_010527804.1| PREDICTED: cleavage and polyadenylation spec... 64 8e-08
ref|XP_010527803.1| PREDICTED: cleavage and polyadenylation spec... 64 9e-08
ref|XP_020592154.1| cleavage and polyadenylation specificity fac... 64 1e-07
ref|XP_015578956.1| PREDICTED: cleavage and polyadenylation spec... 64 1e-07
gb|PKU79029.1| Cleavage and polyadenylation specificity factor s... 64 1e-07
ref|XP_020700357.1| cleavage and polyadenylation specificity fac... 64 1e-07
dbj|GAU20383.1| hypothetical protein TSUD_12000 [Trifolium subte... 63 1e-07
gb|EEF36424.1| cleavage and polyadenylation specificity factor, ... 64 1e-07
ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Popu... 63 1e-07
gb|PNT15792.1| hypothetical protein POPTR_010G106200v3 [Populus ... 63 1e-07
>gb|OAY69787.1| Cleavage and polyadenylation specificity factor subunit 3-II,
partial [Ananas comosus]
Length = 128
Score = 61.2 bits (147), Expect = 4e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNL VPIYFSAGLTIQ
Sbjct: 22 QELCILLDDYWERMNLNVPIYFSAGLTIQ 50
>ref|XP_020554245.1| cleavage and polyadenylation specificity factor subunit 3-II
isoform X3 [Sesamum indicum]
Length = 623
Score = 64.7 bits (156), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_011098509.1| cleavage and polyadenylation specificity factor subunit 3-II
isoform X2 [Sesamum indicum]
Length = 640
Score = 64.7 bits (156), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_011098501.1| cleavage and polyadenylation specificity factor subunit 3-II
isoform X1 [Sesamum indicum]
Length = 644
Score = 64.7 bits (156), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_015073611.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Solanum pennellii]
Length = 649
Score = 64.7 bits (156), Expect = 5e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II [Solanum tuberosum]
Length = 948
Score = 64.7 bits (156), Expect = 6e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_010319559.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Solanum lycopersicum]
Length = 1059
Score = 64.7 bits (156), Expect = 6e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_004956755.1| cleavage and polyadenylation specificity factor subunit 3-II
[Setaria italica]
gb|KQL24404.1| hypothetical protein SETIT_029386mg [Setaria italica]
Length = 561
Score = 64.3 bits (155), Expect = 6e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMNLK+PIYFSAGLTIQ
Sbjct: 248 QELCMLLDDYWERMNLKIPIYFSAGLTIQ 276
>emb|CDP16291.1| unnamed protein product [Coffea canephora]
Length = 647
Score = 64.3 bits (155), Expect = 7e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMNLK+PIYFSAGLTIQ
Sbjct: 247 QELCMLLDDYWERMNLKIPIYFSAGLTIQ 275
>ref|XP_015895381.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II [Ziziphus jujuba]
Length = 665
Score = 64.3 bits (155), Expect = 7e-08
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -1
Query: 115 FVKTFSIILQELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
F + +II ELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 241 FXQFHTIIEXELCILLDDYWERMNLKVPIYFSAGLTIQ 278
>ref|XP_010527804.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Tarenaya hassleriana]
Length = 509
Score = 63.9 bits (154), Expect = 8e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMN+KVPIYFSAGLTIQ
Sbjct: 144 QELCMLLDDYWERMNIKVPIYFSAGLTIQ 172
>ref|XP_010527803.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Tarenaya hassleriana]
Length = 610
Score = 63.9 bits (154), Expect = 9e-08
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELCMLLDDYWERMN+KVPIYFSAGLTIQ
Sbjct: 245 QELCMLLDDYWERMNIKVPIYFSAGLTIQ 273
>ref|XP_020592154.1| cleavage and polyadenylation specificity factor subunit 3-II
[Phalaenopsis equestris]
Length = 653
Score = 63.5 bits (153), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCLLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_015578956.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Ricinus communis]
Length = 656
Score = 63.5 bits (153), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCLLLDDYWERMNLKVPIYFSAGLTIQ 273
>gb|PKU79029.1| Cleavage and polyadenylation specificity factor subunit 3-II
[Dendrobium catenatum]
Length = 672
Score = 63.5 bits (153), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCLLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_020700357.1| cleavage and polyadenylation specificity factor subunit 3-II
[Dendrobium catenatum]
Length = 707
Score = 63.5 bits (153), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCLLLDDYWERMNLKVPIYFSAGLTIQ 273
>dbj|GAU20383.1| hypothetical protein TSUD_12000 [Trifolium subterraneum]
Length = 423
Score = 63.2 bits (152), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 136 QELCILLDDYWERMNLKVPIYFSAGLTIQ 164
>gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 63.5 bits (153), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 245 QELCLLLDDYWERMNLKVPIYFSAGLTIQ 273
>ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
Length = 464
Score = 63.2 bits (152), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 84 QELCILLDDYWERMNLKVPIYFSAGLTIQ 112
>gb|PNT15792.1| hypothetical protein POPTR_010G106200v3 [Populus trichocarpa]
Length = 496
Score = 63.2 bits (152), Expect = 1e-07
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1
Query: 88 QELCMLLDDYWERMNLKVPIYFSAGLTIQ 2
QELC+LLDDYWERMNLKVPIYFSAGLTIQ
Sbjct: 84 QELCILLDDYWERMNLKVPIYFSAGLTIQ 112