BLASTX nr result

ID: Rehmannia29_contig00032793 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00032793
         (480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PON79785.1| hypothetical protein PanWU01x14_010170, partial [...    52   3e-06
gb|PON79786.1| hypothetical protein PanWU01x14_010180 [Parasponi...    52   5e-06

>gb|PON79785.1| hypothetical protein PanWU01x14_010170, partial [Parasponia
           andersonii]
          Length = 70

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = -2

Query: 395 QMKKHIGEKYWYSSIFKSMGSCFYASDKGE-NVKASKTETPNYA-PEAAMVAASKHFSSK 222
           +M K+  ++  +SS  +S  SCF  S +GE + K +K   P  A PEAAM+AA KHFSSK
Sbjct: 7   KMGKNTNKETRFSSAVRSFVSCFNVSGEGEPHEKTTKVVFPAAAGPEAAMIAAGKHFSSK 66

Query: 221 VRLI 210
           VRLI
Sbjct: 67  VRLI 70


>gb|PON79786.1| hypothetical protein PanWU01x14_010180 [Parasponia andersonii]
          Length = 63

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 32/67 (47%), Positives = 44/67 (65%)
 Frame = -2

Query: 410 YKN*IQMKKHIGEKYWYSSIFKSMGSCFYASDKGENVKASKTETPNYAPEAAMVAASKHF 231
           YKN  ++KK+      ++SI KS     + S   +NVK+ K ++ +  PEAAMVAA+KHF
Sbjct: 3   YKNKKEIKKNS-----FASILKSFVLYLFES-ANKNVKSRKAKSVSIGPEAAMVAAAKHF 56

Query: 230 SSKVRLI 210
           SSKVRLI
Sbjct: 57  SSKVRLI 63


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