BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00032550
         (670 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygro...   359   e-122
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei...   341   e-112
dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subt...   278   6e-84
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   280   8e-84
gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposo...   265   4e-83
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo...   268   6e-83
gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo...   275   7e-83
gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposo...   263   1e-82
gb|PNX96445.1| copia LTR rider [Trifolium pratense]                   272   1e-80
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...   271   2e-80
gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposo...   263   7e-80
dbj|GAU10233.1| hypothetical protein TSUD_417410 [Trifolium subt...   267   7e-80
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   265   3e-78
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   265   3e-78
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   257   2e-75
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   256   3e-75
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   256   4e-75
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   256   5e-75
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   256   7e-75
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   256   7e-75

>gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygrometricum]
          Length = 345

 Score =  359 bits (922), Expect = e-122
 Identities = 167/206 (81%), Positives = 187/206 (90%)
 Frame = +1

Query: 1   LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
           LSIIDDFSRKVWVFL+KNKSDVF+ FKNWKTL ENQTGK+IKTLRTDNGLEFCN+LFD L
Sbjct: 127 LSIIDDFSRKVWVFLLKNKSDVFDSFKNWKTLTENQTGKKIKTLRTDNGLEFCNSLFDEL 186

Query: 181 CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
           C + GI+RHKT PYTPQQNGV ERMNRTLLERVRSML SSGLSK+FWGE V TAA+LINR
Sbjct: 187 CEQCGIKRHKTNPYTPQQNGVVERMNRTLLERVRSMLVSSGLSKKFWGECVLTAAFLINR 246

Query: 361 SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
           SPSVPL GKCPE V+SGK+ID+S+L+ FGC AF H++GDKLEPR+ KCVFLGYPEGVKGY
Sbjct: 247 SPSVPLDGKCPESVWSGKEIDYSHLRTFGCTAFAHKRGDKLEPRAVKCVFLGYPEGVKGY 306

Query: 541 RLWLRGEPGFKAIISRDVIFNESEFP 618
           RLW+R EPGF+ I+SRDV FNE+EFP
Sbjct: 307 RLWVRSEPGFRTIVSRDVTFNETEFP 332


>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Erythranthe guttata]
          Length = 598

 Score =  341 bits (875), Expect = e-112
 Identities = 167/220 (75%), Positives = 189/220 (85%), Gaps = 1/220 (0%)
 Frame = +1

Query: 1   LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
           LSIIDD+SRKV+VFL+K KSDVF+KFK WKTLIENQTGKRIKTLRTDNG+EFCN  FDNL
Sbjct: 229 LSIIDDYSRKVFVFLLKQKSDVFDKFKTWKTLIENQTGKRIKTLRTDNGIEFCNLEFDNL 288

Query: 181 CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
           CA  GI+RHK+V +TPQQNGVAERMNRTLLERVRSML SSGL K FWGEA+ TA YLINR
Sbjct: 289 CANSGIRRHKSVVHTPQQNGVAERMNRTLLERVRSMLTSSGLPKLFWGEAILTATYLINR 348

Query: 361 SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
           SPS+PL G  PE V+ GK++D SNL VFG AAFVH KGDKLEPR  KC+FLGYP+GVKGY
Sbjct: 349 SPSMPLNGDLPESVWCGKKVDLSNLHVFGYAAFVHHKGDKLEPRFVKCIFLGYPDGVKGY 408

Query: 541 RLWLRGEPGFKAIISRDVIFNESEFPCL-TPSLPLCESEP 657
           RLWL+G+ G+K IISRDVIFNES FPCL  P++ + +S P
Sbjct: 409 RLWLKGDFGYKIIISRDVIFNESGFPCLAVPNVVIPQSTP 448


>dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subterraneum]
          Length = 1006

 Score =  278 bits (711), Expect = 6e-84
 Identities = 134/203 (66%), Positives = 160/203 (78%)
 Frame = +1

Query: 1   LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
           LSIIDD+SR+VWV ++KNKSDVFEKFK W TLIENQ G ++K LRTDNGLEF +  F+  
Sbjct: 325 LSIIDDYSRRVWVHIIKNKSDVFEKFKEWHTLIENQIGTKLKVLRTDNGLEFVSEQFNEF 384

Query: 181 CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
           C + GI+RH+TV YTPQQNG+AERMNRTLLERVR ML  +GL K FWGEAV+TAAYLINR
Sbjct: 385 CRKKGIKRHRTVAYTPQQNGLAERMNRTLLERVRYMLLGAGLPKSFWGEAVNTAAYLINR 444

Query: 361 SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            PS  +  K P  V+SGK  D+S LK+FG  AF H K DKL+ R+ KCVF+GYP+GVKGY
Sbjct: 445 CPSAGIDLKTPMEVWSGKPADYSKLKIFGALAFAHVKQDKLDDRAVKCVFIGYPDGVKGY 504

Query: 541 RLWLRGEPGFKAIISRDVIFNES 609
           +LW  G+ G K IISRDV F+E+
Sbjct: 505 KLWKMGQGGSKFIISRDVTFDET 527


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  280 bits (716), Expect = 8e-84
 Identities = 131/211 (62%), Positives = 166/211 (78%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            L++IDD+SRKVW++ +KNKS+ F KFK WK L+E QT +++K LRTDNGLEF +N F++L
Sbjct: 473  LTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNSL 532

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI RH+TV YTPQQNG+AERMNRT+LERVR ML+SSGLSK FW EA  TA +LINR
Sbjct: 533  CQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINR 592

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            SPS  L+ K P+  ++GK  D+ +LKVFGC A+VH K DKLEPR+ KC+FLGYP+GVKGY
Sbjct: 593  SPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGYPKGVKGY 652

Query: 541  RLWLRGEPGFKAIISRDVIFNESEFPCLTPS 633
            +LW+  +   K IISRDV FNE +    TP+
Sbjct: 653  KLWIETQGKGKCIISRDVTFNEQDMSKQTPA 683


>gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 516

 Score =  265 bits (678), Expect = 4e-83
 Identities = 125/205 (60%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
 Frame = +1

Query: 1   LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
           LSI+DDFSRKVWV+ +K K++VF++FK WK L+E Q G+ +K LRTDNGLEFC+  F   
Sbjct: 43  LSIVDDFSRKVWVYFLKQKNEVFDRFKEWKVLVETQIGRNLKKLRTDNGLEFCDEKFSKF 102

Query: 181 CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
           C E G+ RHKTV  TPQ+NG+ ER NRT+LERVR ML  +GL K FW EAV +A Y INR
Sbjct: 103 CRENGVARHKTVRGTPQKNGLVERFNRTILERVRCMLNHAGLPKSFWAEAVSSAVYCINR 162

Query: 361 SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            PS  L+ K P+ V+SG+++D+S L+VFGC A+ H K DKLEPR+ K +F+GYPEGVKGY
Sbjct: 163 CPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIFIGYPEGVKGY 222

Query: 541 RLWLRGEPGF-KAIISRDVIFNESE 612
           RLW   EPG+ K +ISRDV+FNE E
Sbjct: 223 RLWCL-EPGYKKCLISRDVVFNEIE 246


>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 634

 Score =  268 bits (685), Expect = 6e-83
 Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 1/205 (0%)
 Frame = +1

Query: 1   LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
           LSI+DDFSRKVWV+ +K K++VF++FK WK L+E QTG+ +K LRTDNGLEFC+  F   
Sbjct: 161 LSIVDDFSRKVWVYFLKQKNEVFDRFKEWKVLVETQTGRNLKKLRTDNGLEFCDEKFSKF 220

Query: 181 CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
           C E G+ RHKTV  TPQ+NG+AER NRT+LERVR ML  +GL K FW EAV +A Y INR
Sbjct: 221 CRENGVARHKTVRGTPQKNGLAERFNRTILERVRCMLNHAGLPKSFWVEAVSSAVYCINR 280

Query: 361 SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            PS  L+ K P+ V+SG+++D+S L+VFGC A+ H K DKLEPR+ K +F+GYPEGVKGY
Sbjct: 281 CPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIFIGYPEGVKGY 340

Query: 541 RLWLRGEPGF-KAIISRDVIFNESE 612
           RLW   EPG+ K +ISRDV+FNE E
Sbjct: 341 RLWCL-EPGYKKCLISRDVVFNEIE 364


>gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 993

 Score =  275 bits (703), Expect = 7e-83
 Identities = 128/203 (63%), Positives = 158/203 (77%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            LS IDD+SRKVW+FL+K+K + F KF  WK+++ENQ  +++K LRTDNGLEFCN  F+  
Sbjct: 442  LSFIDDYSRKVWIFLLKSKDETFSKFLEWKSMVENQKNRKLKVLRTDNGLEFCNESFNKF 501

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C++ GI RHKTV +TPQQNG+AERMNRTLL+RVR +L SSGLSK FWGEA+ TA YL+NR
Sbjct: 502  CSDSGIVRHKTVSHTPQQNGLAERMNRTLLDRVRCLLFSSGLSKFFWGEALSTACYLVNR 561

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            +PS  +  K P+ ++ GK    ++L+VFGC A+ HQ   KLEPRS KCVFLGYP GVKGY
Sbjct: 562  TPSSAINFKTPQELWKGKPPSLTHLRVFGCLAYPHQNKGKLEPRSIKCVFLGYPTGVKGY 621

Query: 541  RLWLRGEPGFKAIISRDVIFNES 609
            RLW    PG K IISRDVIFNE+
Sbjct: 622  RLWDLSSPGVKTIISRDVIFNEN 644


>gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 498

 Score =  263 bits (673), Expect = 1e-82
 Identities = 123/208 (59%), Positives = 160/208 (76%)
 Frame = +1

Query: 1   LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
           L+IIDDF+R+VW++++K+K++ ++KF++W TLI+NQ   ++K LRTDNGLEF +  F   
Sbjct: 96  LTIIDDFTRRVWLYVLKDKTETYKKFRDWYTLIQNQLETKLKVLRTDNGLEFLSEQFAEF 155

Query: 181 CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
           C   GI+RH+TVP+TPQQNG+AERMNRT+LERVR ML  SGLSK+FWGEA  TAAYLINR
Sbjct: 156 CRNQGIKRHRTVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAATTAAYLINR 215

Query: 361 SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            PS  L  K P   + GK +D+SNL+VFG  A+ H K  KLEPR+ KCVF+GYP+GVKGY
Sbjct: 216 CPSSALNNKTPMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIGYPDGVKGY 275

Query: 541 RLWLRGEPGFKAIISRDVIFNESEFPCL 624
           +LW   + G K IISRDV F+E++   L
Sbjct: 276 KLWKLEKGGGKCIISRDVTFDETKLGIL 303


>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
          Length = 1318

 Score =  272 bits (695), Expect = 1e-80
 Identities = 131/205 (63%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            LSI+DD+SRK+WVF+ K K + FE FK+WKTL+ENQTG+++K LRTDNGLEFCN  FD  
Sbjct: 494  LSIVDDYSRKLWVFIQKTKDETFENFKSWKTLVENQTGRKVKRLRTDNGLEFCNEAFDIF 553

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            CA  GI RH+T   TPQQNG+AER NRT+LERVR ML S+GL K FW EAV TA YLINR
Sbjct: 554  CAASGIARHRTTAGTPQQNGLAERFNRTILERVRCMLTSAGLKKVFWAEAVSTATYLINR 613

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
             PS  L  K PE V+SG   D   L+VFGC A+ H + DK+EPR+ KC+F+GYPEGVK Y
Sbjct: 614  CPSTALDMKTPEEVWSGHPPDLDKLRVFGCVAYAHIRQDKVEPRALKCMFMGYPEGVKAY 673

Query: 541  RLWLRGEPGFK-AIISRDVIFNESE 612
            RLW   EPG K  I SRDV+FNE+E
Sbjct: 674  RLWCL-EPGHKRCITSRDVVFNEAE 697


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score =  271 bits (693), Expect = 2e-80
 Identities = 126/206 (61%), Positives = 159/206 (77%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            +S+IDD+SRK+WV  +K+K + F+ FK+WK ++E QTGK+IK LRTDNGLE+C+  F + 
Sbjct: 494  ISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMMVETQTGKKIKKLRTDNGLEYCSTEFKDF 553

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI RH TVP TPQQNG+AERMNRT+LERVR MLA SGL + FW EAV TA+YLINR
Sbjct: 554  CKQEGIVRHYTVPNTPQQNGLAERMNRTILERVRCMLADSGLPRMFWAEAVVTASYLINR 613

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
             PS  L+ K P+ V++G + DFSNL+ FGC AF H + DKL+PR+KKCV LGYPE VKGY
Sbjct: 614  CPSTALEFKTPQEVWTGHRPDFSNLRAFGCTAFAHIRQDKLQPRAKKCVLLGYPENVKGY 673

Query: 541  RLWLRGEPGFKAIISRDVIFNESEFP 618
            +LW       + +ISRDV+FNE EFP
Sbjct: 674  KLWCIETGEERCLISRDVVFNEEEFP 699


>gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 780

 Score =  263 bits (673), Expect = 7e-80
 Identities = 123/208 (59%), Positives = 160/208 (76%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            L+IIDDF+R+VW++++K+K++ ++KF++W TLI+NQ   ++K LRTDNGLEF +  F   
Sbjct: 499  LTIIDDFTRRVWLYVLKDKTETYKKFRDWYTLIQNQLETKLKVLRTDNGLEFLSEQFAEF 558

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C   GI+RH+TVP+TPQQNG+AERMNRT+LERVR ML  SGLSK+FWGEA  TAAYLINR
Sbjct: 559  CRNQGIKRHRTVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAATTAAYLINR 618

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
             PS  L  K P   + GK +D+SNL+VFG  A+ H K  KLEPR+ KCVF+GYP+GVKGY
Sbjct: 619  CPSSALNNKTPMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIGYPDGVKGY 678

Query: 541  RLWLRGEPGFKAIISRDVIFNESEFPCL 624
            +LW   + G K IISRDV F+E++   L
Sbjct: 679  KLWKLEKGGGKCIISRDVTFDETKLGIL 706


>dbj|GAU10233.1| hypothetical protein TSUD_417410 [Trifolium subterraneum]
          Length = 987

 Score =  267 bits (682), Expect = 7e-80
 Identities = 130/203 (64%), Positives = 155/203 (76%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            LSIIDD+SR+VWV ++KNKSD FEKFK W TLIENQ G ++K LRT+NGL+F +  F+  
Sbjct: 577  LSIIDDYSRRVWVHIIKNKSDAFEKFKEWHTLIENQIGTKLKVLRTNNGLKFVSEQFNEF 636

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI+RH+TV YTPQQNG+AERMNRTLLERVR ML  +GL K FWGEAV+TAAYLINR
Sbjct: 637  CRKKGIKRHRTVAYTPQQNGLAERMNRTLLERVRCMLLGAGLPKSFWGEAVNTAAYLINR 696

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
             PS  +  K P  V+S K  D+SNLK+FG  AF   K DKL+ R  KCVF+GYP GVKGY
Sbjct: 697  CPSTGIDLKTPMEVWSDKPTDYSNLKIFGALAFARVKQDKLDARVVKCVFIGYPNGVKGY 756

Query: 541  RLWLRGEPGFKAIISRDVIFNES 609
            +LW  G  G K IISRDV F+E+
Sbjct: 757  KLWKMGPGGSKFIISRDVTFDET 779


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  265 bits (678), Expect = 3e-78
 Identities = 125/203 (61%), Positives = 155/203 (76%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            ++ IDDFSRKVWV+ +K K +VF KFK WKT++E +TGK +KTLRTDNGLEFCN  FD  
Sbjct: 614  VTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEF 673

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI RH+TV +TPQQNGVAERMN+TL++R R M   +GLSK+FW EAV+TAAYL+NR
Sbjct: 674  CRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNR 733

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            SPS  +  K P+ V+SGK  ++S LK+FGC A+ H    KLEPR+ KC+FLGY  GVKGY
Sbjct: 734  SPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGY 793

Query: 541  RLWLRGEPGFKAIISRDVIFNES 609
            RLW   +   K IISRDV F+ES
Sbjct: 794  RLWCTEDRTPKFIISRDVTFDES 816


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  265 bits (678), Expect = 3e-78
 Identities = 125/203 (61%), Positives = 155/203 (76%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            ++ IDDFSRKVWV+ +K K +VF KFK WKT++E +TGK +KTLRTDNGLEFCN  FD  
Sbjct: 827  VTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEF 886

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI RH+TV +TPQQNGVAERMN+TL++R R M   +GLSK+FW EAV+TAAYL+NR
Sbjct: 887  CRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNR 946

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            SPS  +  K P+ V+SGK  ++S LK+FGC A+ H    KLEPR+ KC+FLGY  GVKGY
Sbjct: 947  SPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGY 1006

Query: 541  RLWLRGEPGFKAIISRDVIFNES 609
            RLW   +   K IISRDV F+ES
Sbjct: 1007 RLWCTEDRTPKFIISRDVTFDES 1029


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  257 bits (657), Expect = 2e-75
 Identities = 123/203 (60%), Positives = 156/203 (76%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            +SIIDD+SR  WV++MK+KS+ F+KFK WK L+ENQTGK+IK LRTDNGLEFC + FD  
Sbjct: 493  VSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQF 552

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI RH+TV  TPQQNGVAERMN+TLLER R ML+++GL +RFW EAV TA YLINR
Sbjct: 553  CKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINR 612

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
             P   ++ K P  ++SGK  D+SNLK FGC A+ H    KLEPR+KK VF+GY +GVKG+
Sbjct: 613  GPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGF 672

Query: 541  RLWLRGEPGFKAIISRDVIFNES 609
            R+W   E   + I+SR+V+F+ES
Sbjct: 673  RIWSPAEK--RVIMSRNVVFDES 693


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  256 bits (655), Expect = 3e-75
 Identities = 128/223 (57%), Positives = 159/223 (71%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            L+IIDD+SRKVW + +K+K D F  FKNWK +IE QT +++K LRTDNG EFC++ F++ 
Sbjct: 507  LTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDY 566

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA  TA YLINR
Sbjct: 567  CRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINR 626

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            SPS+PL  K P  V+SG   D+S LKVFGC A+ H    KLEPR+ KC+FLGY  GVKGY
Sbjct: 627  SPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGY 686

Query: 541  RLWLRGEPGFKAIISRDVIFNESEFPCLTPSLPLCESEPAPNK 669
            +LW   E G K  +SR V+FNES     T SLP   SE  P K
Sbjct: 687  KLW-NPETG-KTFMSRSVVFNESVM--FTNSLP---SEHVPEK 722


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1373

 Score =  256 bits (655), Expect = 4e-75
 Identities = 128/223 (57%), Positives = 159/223 (71%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            L+IIDD+SRKVW + +K+K D F  FKNWK +IE QT +++K LRTDNG EFC++ F++ 
Sbjct: 507  LTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDY 566

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA  TA YLINR
Sbjct: 567  CRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINR 626

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            SPS+PL  K P  V+SG   D+S LKVFGC A+ H    KLEPR+ KC+FLGY  GVKGY
Sbjct: 627  SPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGY 686

Query: 541  RLWLRGEPGFKAIISRDVIFNESEFPCLTPSLPLCESEPAPNK 669
            +LW   E G K  +SR V+FNES     T SLP   SE  P K
Sbjct: 687  KLW-NPETG-KTFMSRSVVFNESVM--FTNSLP---SEHVPEK 722


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  256 bits (654), Expect = 5e-75
 Identities = 127/223 (56%), Positives = 159/223 (71%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            L++IDD+SRKVW + +K+K D F  FKNWK +IE QT +++K LRTDNG EFC++ F++ 
Sbjct: 507  LTVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDY 566

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA  TA YLINR
Sbjct: 567  CRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINR 626

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            SPS+PL  K P  V+SG   D+S LKVFGC A+ H    KLEPR+ KC+FLGY  GVKGY
Sbjct: 627  SPSIPLNKKTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGY 686

Query: 541  RLWLRGEPGFKAIISRDVIFNESEFPCLTPSLPLCESEPAPNK 669
            +LW   E G K  +SR V+FNES     T SLP   SE  P K
Sbjct: 687  KLW-NPETG-KTFMSRSVVFNESVM--FTNSLP---SEHVPEK 722


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  256 bits (653), Expect = 7e-75
 Identities = 120/203 (59%), Positives = 150/203 (73%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            +SIIDDF+RKVWV+ MK K + FEKF  W  L+ENQT +R+KTLRTDNGLEFCN LFD  
Sbjct: 521  MSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGF 580

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C   GI RH+T  YTPQQNGVAERMNRT++E+VRSML+ SGL KRFW EA HT   LIN+
Sbjct: 581  CESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINK 640

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            +PS  L  + P+  +SG    +S L+ +GC AFVH    KLEPR+KK V +GYP GVKGY
Sbjct: 641  TPSSALNFEIPDKKWSGNPPVYSYLRRYGCVAFVHTDDGKLEPRAKKGVLIGYPVGVKGY 700

Query: 541  RLWLRGEPGFKAIISRDVIFNES 609
            ++W+  E   K ++SR++IF E+
Sbjct: 701  KVWILDER--KCVVSRNIIFQEN 721


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  256 bits (653), Expect = 7e-75
 Identities = 123/203 (60%), Positives = 151/203 (74%)
 Frame = +1

Query: 1    LSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQTGKRIKTLRTDNGLEFCNNLFDNL 180
            L+ IDD+SRKVWV+ +K+K +V   FK +K LIENQTGK+IK  RTDNGLEFC+  F+  
Sbjct: 1001 LTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEF 1060

Query: 181  CAEYGIQRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLINR 360
            C   GI RH+TV  TPQQNGVAERMNRTLLER R M +++GL + FW EAV+TA YL+NR
Sbjct: 1061 CKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNR 1120

Query: 361  SPSVPLKGKCPEFVFSGKQIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYPEGVKGY 540
            SPS  ++ K PE V+SG   D+S L+VFGC A+ H    KL+PR+KKC+FLGY +GVKGY
Sbjct: 1121 SPSTAIELKTPEEVWSGSPADYSGLRVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGY 1180

Query: 541  RLWLRGEPGFKAIISRDVIFNES 609
            RLW       K IISRDV F+ES
Sbjct: 1181 RLWCPDPVSSKFIISRDVTFDES 1203