BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00031699
         (836 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009336428.1| hypothetical chloroplast RF21 (chloroplast) ...   104   7e-25
gb|AJW67282.1| ycf2 protein, partial (chloroplast) [Tordylium ma...   104   8e-25
gb|AJW67279.1| ycf2 protein, partial (chloroplast) [Heracleum le...   104   9e-25
gb|AJW67276.1| ycf2 protein, partial (chloroplast) [Leiotulus da...   104   9e-25
gb|AJW67273.1| ycf2 protein, partial (chloroplast) [Pastinaca cl...   104   9e-25
gb|AJW67287.1| ycf2 protein, partial (chloroplast) [Ducrosia ane...   103   2e-24
gb|KZM80625.1| hypothetical protein DCAR_031999 [Daucus carota s...   104   2e-24
gb|AJW67281.1| ycf2 protein, partial (chloroplast) [Tordylium la...   102   3e-24
gb|AJW67274.1| ycf2 protein, partial (chloroplast) [Pastinaca um...   102   3e-24
gb|ATP61744.1| Ycf2, partial (chloroplast) [Synotis solidaginea]      102   6e-24
gb|AJW67286.1| ycf2 protein, partial (chloroplast) [Tordyliopsis...   102   6e-24
gb|AEX93956.1| hypothetical chloroplast RF21 (chloroplast) [Amar...   111   8e-24
gb|ATP61745.1| Ycf2, partial (chloroplast) [Nymphoides peltata] ...   101   1e-23
ref|YP_009431431.1| hypothetical chloroplast RF21 (chloroplast) ...   110   1e-23
gb|AMA07153.1| conserved hypothetical protein Ycf2 (chloroplast)...   110   2e-23
ref|YP_009231869.1| hypothetical chloroplast RF2 (chloroplast) [...   110   2e-23
gb|AEX93960.1| hypothetical chloroplast RF21 (chloroplast) [Aphy...   110   2e-23
ref|YP_009431090.1| hypothetical chloroplast RF21 (chloroplast) ...   110   2e-23
ref|YP_009108471.1| Ycf2 (chloroplast) [Genlisea margaretae] >gi...   110   2e-23
emb|CBL86549.1| YCF2 protein, partial [Olea europaea]                 102   3e-23

>ref|YP_009336428.1| hypothetical chloroplast RF21 (chloroplast) [Nicotiana otophora]
 ref|YP_009336456.1| hypothetical chloroplast RF21 (chloroplast) [Nicotiana otophora]
 gb|ALT14523.1| hypothetical chloroplast RF21 (chloroplast) [Nicotiana otophora]
 gb|ALT14552.1| hypothetical chloroplast RF21 (chloroplast) [Nicotiana otophora]
          Length = 84

 Score =  104 bits (259), Expect = 7e-25
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RW RTNSSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 24  QRWLRTNSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 80


>gb|AJW67282.1| ycf2 protein, partial (chloroplast) [Tordylium maximum]
 gb|AJW67283.1| ycf2 protein, partial (chloroplast) [Zosima absinthifolia]
 gb|AJW67284.1| ycf2 protein, partial (chloroplast) [Zosima orientalis]
 gb|AJW67285.1| ycf2 protein, partial (chloroplast) [Semenovia dissectifolia]
          Length = 88

 Score =  104 bits (259), Expect = 8e-25
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 12  QRWFRTTSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 68


>gb|AJW67279.1| ycf2 protein, partial (chloroplast) [Heracleum lehmannianum]
          Length = 90

 Score =  104 bits (259), Expect = 9e-25
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 14  QRWFRTTSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 70


>gb|AJW67276.1| ycf2 protein, partial (chloroplast) [Leiotulus dasyanthus]
 gb|AJW67277.1| ycf2 protein, partial (chloroplast) [Leiotulus secacul]
 gb|AJW67278.1| ycf2 protein, partial (chloroplast) [Leiotulus porphyrodiscus]
          Length = 90

 Score =  104 bits (259), Expect = 9e-25
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 14  QRWFRTTSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 70


>gb|AJW67273.1| ycf2 protein, partial (chloroplast) [Pastinaca clausii]
 gb|AJW67275.1| ycf2 protein, partial (chloroplast) [Malabaila suaveolens]
 gb|AJW67280.1| ycf2 protein, partial (chloroplast) [Heracleum leskovii]
          Length = 90

 Score =  104 bits (259), Expect = 9e-25
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 14  QRWFRTTSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 70


>gb|AJW67287.1| ycf2 protein, partial (chloroplast) [Ducrosia anethifolia]
          Length = 88

 Score =  103 bits (257), Expect = 2e-24
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 12  QRWFRTASSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 68


>gb|KZM80625.1| hypothetical protein DCAR_031999 [Daucus carota subsp. sativus]
          Length = 113

 Score =  104 bits (259), Expect = 2e-24
 Identities = 50/57 (87%), Positives = 52/57 (91%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 37  QRWFRTTSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 93


>gb|AJW67281.1| ycf2 protein, partial (chloroplast) [Tordylium lanatum]
          Length = 88

 Score =  102 bits (255), Expect = 3e-24
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQ+LS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 12  QRWFRTTSSLSNGSFRSNTLSESYQFLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 68


>gb|AJW67274.1| ycf2 protein, partial (chloroplast) [Pastinaca umbrosa]
          Length = 90

 Score =  102 bits (255), Expect = 3e-24
 Identities = 49/57 (85%), Positives = 51/57 (89%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQYLS LFLSN TL DQ TKTLLRK+WLFPDEMK
Sbjct: 14  QRWFRTTSSLSNGSFRSNTLSESYQYLSNLFLSNGTLFDQMTKTLLRKRWLFPDEMK 70


>gb|ATP61744.1| Ycf2, partial (chloroplast) [Synotis solidaginea]
          Length = 84

 Score =  102 bits (253), Expect = 6e-24
 Identities = 48/57 (84%), Positives = 51/57 (89%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RW RTN SLSNGSFRSNTLFESYQYLS LFLSN TLLDQ TK LLRK+WLFPDEM+
Sbjct: 8   QRWLRTNRSLSNGSFRSNTLFESYQYLSNLFLSNGTLLDQMTKALLRKRWLFPDEMQ 64


>gb|AJW67286.1| ycf2 protein, partial (chloroplast) [Tordyliopsis brunonis]
          Length = 88

 Score =  102 bits (253), Expect = 6e-24
 Identities = 49/57 (85%), Positives = 51/57 (89%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RWFRT SSLSNGSFRSNTL ESYQYLS LFLS  TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 12  QRWFRTTSSLSNGSFRSNTLSESYQYLSNLFLSKGTLLDQMTKTLLRKRWLFPDEMK 68


>gb|AEX93956.1| hypothetical chloroplast RF21 (chloroplast) [Amaryllis belladonna]
          Length = 2280

 Score =  111 bits (278), Expect = 8e-24
 Identities = 65/115 (56%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
 Frame = -1

Query: 338  FSWTFQYVQVITNQMCIITT-TVTNKSTWEGRFIQ--YEHHFFLI**FS*FHISNIYDER 168
            F   F  ++   ++  +IT+ T T  S ++ RFI+   E HF L+          I+ +R
Sbjct: 2163 FVSVFSRLEFFADEEGLITSQTNTPASIYKRRFIKNTQEKHFELL----------IHRQR 2212

Query: 167  WFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
            W RTNSSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 2213 WLRTNSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 2267


>gb|ATP61745.1| Ycf2, partial (chloroplast) [Nymphoides peltata]
 gb|ATP61746.1| Ycf2, partial (chloroplast) [Nymphoides peltata]
 gb|ATP61747.1| Ycf2, partial (chloroplast) [Nymphoides peltata]
 gb|ATP61748.1| Ycf2, partial (chloroplast) [Nymphoides peltata]
 gb|ATP61749.1| Ycf2, partial (chloroplast) [Nymphoides peltata]
          Length = 84

 Score =  101 bits (251), Expect = 1e-23
 Identities = 49/57 (85%), Positives = 51/57 (89%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RW RTNSSLSN SFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 8   QRWLRTNSSLSNESFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 64


>ref|YP_009431431.1| hypothetical chloroplast RF21 (chloroplast) [Anthericum ramosum]
 ref|YP_009431448.1| hypothetical chloroplast RF21 (chloroplast) [Anthericum ramosum]
 gb|ASW26866.1| hypothetical chloroplast RF21 (chloroplast) [Anthericum ramosum]
 gb|ASW26885.1| hypothetical chloroplast RF21 (chloroplast) [Anthericum ramosum]
          Length = 2315

 Score =  110 bits (276), Expect = 1e-23
 Identities = 61/96 (63%), Positives = 68/96 (70%)
 Frame = -1

Query: 290  IITTTVTNKSTWEGRFIQYEHHFFLI**FS*FHISNIYDERWFRTNSSLSNGSFRSNTLF 111
            +IT T    S  +  FI+ E HF L+          I+ +RW RTNSSLSNGSFRSNTL 
Sbjct: 2217 LITQTDPPTSISKRWFIKNEKHFELL----------IHRQRWLRTNSSLSNGSFRSNTLS 2266

Query: 110  ESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
            ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 2267 ESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 2302


>gb|AMA07153.1| conserved hypothetical protein Ycf2 (chloroplast) [Goodyera
            schlechtendaliana]
          Length = 2265

 Score =  110 bits (275), Expect = 2e-23
 Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
 Frame = -1

Query: 359  DK*FILDFSWTFQYVQVITNQMCIITTTVTNKSTWEGRFIQ--YEHHFFLI**FS*FHIS 186
            D+ F+  FS    +     ++  I + T ++ S ++  FI+   E HF L+         
Sbjct: 2142 DQPFVSVFSRREFFADEEMSKGLIASQTNSSTSMYKRWFIKNTQEKHFELL--------- 2192

Query: 185  NIYDERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEM 6
             I+ +RWFRTNSSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEM
Sbjct: 2193 -IHRQRWFRTNSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEM 2251

Query: 5    K 3
            K
Sbjct: 2252 K 2252


>ref|YP_009231869.1| hypothetical chloroplast RF2 (chloroplast) [Goodyera
            schlechtendaliana]
 ref|YP_009231888.1| hypothetical chloroplast RF2 (chloroplast) [Goodyera
            schlechtendaliana]
 gb|AMA07232.1| hypothetical chloroplast RF2 (chloroplast) [Goodyera
            schlechtendaliana]
 gb|AMA07233.1| hypothetical chloroplast RF2 (chloroplast) [Goodyera
            schlechtendaliana]
          Length = 2267

 Score =  110 bits (275), Expect = 2e-23
 Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
 Frame = -1

Query: 359  DK*FILDFSWTFQYVQVITNQMCIITTTVTNKSTWEGRFIQ--YEHHFFLI**FS*FHIS 186
            D+ F+  FS    +     ++  I + T ++ S ++  FI+   E HF L+         
Sbjct: 2144 DQPFVSVFSRREFFADEEMSKGLIASQTNSSTSMYKRWFIKNTQEKHFELL--------- 2194

Query: 185  NIYDERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEM 6
             I+ +RWFRTNSSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEM
Sbjct: 2195 -IHRQRWFRTNSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEM 2253

Query: 5    K 3
            K
Sbjct: 2254 K 2254


>gb|AEX93960.1| hypothetical chloroplast RF21 (chloroplast) [Aphyllanthes
            monspeliensis]
          Length = 2271

 Score =  110 bits (275), Expect = 2e-23
 Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
 Frame = -1

Query: 389  YIFLIKICKLDK*FILDFSWTFQYVQVITNQMCIITTTVTNKSTWEGRFIQ--YEHHFFL 216
            + FL K    D+ F+  FS    +     ++  I + T    S ++G FI+   E HF L
Sbjct: 2142 FFFLFK----DQPFVSVFSRREFFADEEMSKGLITSQTNPPTSIYKGWFIKNTQEKHFEL 2197

Query: 215  I**FS*FHISNIYDERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLL 36
            +          I+ +RW RTNSSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLL
Sbjct: 2198 L----------IHRQRWLRTNSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLL 2247

Query: 35   RKKWLFPDEMK 3
            RK+WLFPDEMK
Sbjct: 2248 RKRWLFPDEMK 2258


>ref|YP_009431090.1| hypothetical chloroplast RF21 (chloroplast) [Aphyllanthes
            monspeliensis]
 ref|YP_009431107.1| hypothetical chloroplast RF21 (chloroplast) [Aphyllanthes
            monspeliensis]
 gb|ASW26525.1| hypothetical chloroplast RF21 (chloroplast) [Aphyllanthes
            monspeliensis]
 gb|ASW26544.1| hypothetical chloroplast RF21 (chloroplast) [Aphyllanthes
            monspeliensis]
          Length = 2275

 Score =  110 bits (275), Expect = 2e-23
 Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
 Frame = -1

Query: 389  YIFLIKICKLDK*FILDFSWTFQYVQVITNQMCIITTTVTNKSTWEGRFIQ--YEHHFFL 216
            + FL K    D+ F+  FS    +     ++  I + T    S ++G FI+   E HF L
Sbjct: 2146 FFFLFK----DQPFVSVFSRREFFADEEMSKGLITSQTNPPTSIYKGWFIKNTQEKHFEL 2201

Query: 215  I**FS*FHISNIYDERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLL 36
            +          I+ +RW RTNSSLSNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLL
Sbjct: 2202 L----------IHRQRWLRTNSSLSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLL 2251

Query: 35   RKKWLFPDEMK 3
            RK+WLFPDEMK
Sbjct: 2252 RKRWLFPDEMK 2262


>ref|YP_009108471.1| Ycf2 (chloroplast) [Genlisea margaretae]
 ref|YP_009108475.1| Ycf2 (chloroplast) [Genlisea margaretae]
 emb|CDI44031.1| Ycf2 (chloroplast) [Genlisea margaretae]
 emb|CDI44038.1| Ycf2 (chloroplast) [Genlisea margaretae]
          Length = 2279

 Score =  110 bits (275), Expect = 2e-23
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = -1

Query: 173  ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
            +RW RTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQ TKTLLRK+WLFPDEM+
Sbjct: 2205 QRWLRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQMTKTLLRKRWLFPDEMQ 2261


>emb|CBL86549.1| YCF2 protein, partial [Olea europaea]
          Length = 146

 Score =  102 bits (253), Expect = 3e-23
 Identities = 49/57 (85%), Positives = 51/57 (89%)
 Frame = -1

Query: 173 ERWFRTNSSLSNGSFRSNTLFESYQYLSTLFLSNRTLLDQTTKTLLRKKWLFPDEMK 3
           +RW RTNSS SNGSFRSNTL ESYQYLS LFLSN TLLDQ TKTLLRK+WLFPDEMK
Sbjct: 86  QRWLRTNSSSSNGSFRSNTLSESYQYLSNLFLSNGTLLDQMTKTLLRKRWLFPDEMK 142