BLASTX nr result

ID: Rehmannia29_contig00031549 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00031549
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN03867.1| hypothetical protein CDL12_23609 [Handroanthus im...    59   1e-07
ref|XP_011077927.1| pre-rRNA-processing protein TSR2-like [Sesam...    60   1e-07
gb|KZV47537.1| hypothetical protein F511_32791 [Dorcoceras hygro...    58   5e-07
gb|PIN19495.1| hypothetical protein CDL12_07826 [Handroanthus im...    57   6e-07

>gb|PIN03867.1| hypothetical protein CDL12_23609 [Handroanthus impetiginosus]
          Length = 197

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -1

Query: 260 EQVYIDDVEDMLDEFMLSLNTEIGNGSMEEV 168
           EQVYIDDVEDMLDEFMLS NTEIG+GS+EE+
Sbjct: 60  EQVYIDDVEDMLDEFMLSFNTEIGDGSIEEI 90


>ref|XP_011077927.1| pre-rRNA-processing protein TSR2-like [Sesamum indicum]
          Length = 229

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 31/31 (100%)
 Frame = -1

Query: 260 EQVYIDDVEDMLDEFMLSLNTEIGNGSMEEV 168
           EQVYIDD+EDMLDEFMLSLNTEIG+GS+EE+
Sbjct: 60  EQVYIDDLEDMLDEFMLSLNTEIGDGSIEEI 90


>gb|KZV47537.1| hypothetical protein F511_32791 [Dorcoceras hygrometricum]
          Length = 198

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 26/30 (86%), Positives = 30/30 (100%)
 Frame = -1

Query: 257 QVYIDDVEDMLDEFMLSLNTEIGNGSMEEV 168
           QVYIDD+EDMLDEFMLSLNTEIG+GS+EE+
Sbjct: 61  QVYIDDLEDMLDEFMLSLNTEIGDGSIEEI 90


>gb|PIN19495.1| hypothetical protein CDL12_07826 [Handroanthus impetiginosus]
          Length = 195

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = -1

Query: 260 EQVYIDDVEDMLDEFMLSLNTEIGNGSMEE-VCPLGIFKLNFRYQHMFV---CYAFMLYM 93
           EQVYIDDVEDMLDEFMLSLN EI +GS+EE +    IF + ++Y +  V    + F   +
Sbjct: 60  EQVYIDDVEDMLDEFMLSLNAEIDDGSIEEFILQAMIFIVIYKYYYFCVPKNVFTFPRCV 119

Query: 92  LPTIVKTLNLLI 57
            P +   L+LL+
Sbjct: 120 GPWLRLLLSLLL 131


Top