BLASTX nr result
ID: Rehmannia29_contig00031513
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00031513
(400 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN21442.1| Replication factor C, subunit RFC4 [Handroanthus ... 141 3e-36
ref|XP_011085319.1| protein STICHEL-like 4 [Sesamum indicum] 133 2e-33
gb|KZV47504.1| protein STICHEL-like 3 [Dorcoceras hygrometricum] 133 2e-33
gb|PIN06689.1| Replication factor C, subunit RFC4 [Handroanthus ... 125 7e-31
ref|XP_010655546.1| PREDICTED: protein STICHEL-like 3 isoform X2... 121 3e-29
ref|XP_010655545.1| PREDICTED: protein STICHEL-like 3 isoform X1... 121 3e-29
ref|XP_015875681.1| PREDICTED: protein STICHEL-like 3 [Ziziphus ... 119 1e-28
ref|XP_021293962.1| protein STICHEL-like 3 isoform X3 [Herrania ... 117 7e-28
ref|XP_021293961.1| protein STICHEL-like 3 isoform X2 [Herrania ... 117 7e-28
ref|XP_021293959.1| protein STICHEL-like 3 isoform X1 [Herrania ... 117 7e-28
gb|EXC68992.1| DNA polymerase III subunit [Morus notabilis] 115 1e-27
ref|XP_010113159.2| protein STICHEL-like 3, partial [Morus notab... 115 1e-27
ref|XP_016648798.1| PREDICTED: protein STICHEL-like 3 [Prunus mume] 116 2e-27
ref|XP_020418197.1| protein STICHEL-like 3 [Prunus persica] >gi|... 116 2e-27
ref|XP_021813184.1| protein STICHEL-like 3 [Prunus avium] 116 2e-27
ref|XP_023874952.1| protein STICHEL-like 3 [Quercus suber] >gi|1... 116 2e-27
ref|XP_007025300.2| PREDICTED: protein STICHEL-like 3 [Theobroma... 116 2e-27
gb|EOY27922.1| AAA-type ATPase family protein isoform 1 [Theobro... 116 2e-27
gb|EOY27923.1| AAA-type ATPase family protein isoform 2 [Theobro... 116 2e-27
gb|EOY27924.1| AAA-type ATPase family protein isoform 3 [Theobro... 116 2e-27
>gb|PIN21442.1| Replication factor C, subunit RFC4 [Handroanthus impetiginosus]
Length = 1125
Score = 141 bits (355), Expect = 3e-36
Identities = 77/142 (54%), Positives = 88/142 (61%), Gaps = 15/142 (10%)
Frame = -3
Query: 395 LSCNHDGRYAQVXXXXXXXXXXXGSHGNNTXXXXXXXXXXXXXXRPSIATRDAETQNEMS 216
LSCNHD +QV SHGNN RPS+++R AE QN+MS
Sbjct: 199 LSCNHDRMRSQVTKNAEEAGANIHSHGNNMNRPKRRKFRGARRNRPSVSSRSAEAQNKMS 258
Query: 215 VASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHHRGKSFIDMAGRS 78
VASNSFAQ EYD N +GVP N CGIPWNWSRIHHRGKSF+D+AG+S
Sbjct: 259 VASNSFAQGRNPRKYQLEEGVEEYDDQNDSGVPGNRCGIPWNWSRIHHRGKSFLDIAGQS 318
Query: 77 ISCGLSESRLKKEGSISR-RGI 15
+SCGLSESRLKKEG +R RGI
Sbjct: 319 LSCGLSESRLKKEGLFARGRGI 340
>ref|XP_011085319.1| protein STICHEL-like 4 [Sesamum indicum]
Length = 1154
Score = 133 bits (334), Expect = 2e-33
Identities = 72/120 (60%), Positives = 78/120 (65%), Gaps = 14/120 (11%)
Frame = -3
Query: 320 HGNNTXXXXXXXXXXXXXXRPSIATRDAETQNEMSVASNSFAQ--------------EYD 183
HGN+ RPS+A RDAETQNEMSVASNSF EYD
Sbjct: 254 HGNSLNRGKRRRFRGARRNRPSVAARDAETQNEMSVASNSFGHGRAPQKYHMEEGVHEYD 313
Query: 182 GHNVTGVPRNGCGIPWNWSRIHHRGKSFIDMAGRSISCGLSESRLKKEGSISRRGIADMP 3
NV GVPRNGCGIPWNWSRIHHRGKSF+DMAGRS+SCGLSESRL+K RG+ DMP
Sbjct: 314 DQNVNGVPRNGCGIPWNWSRIHHRGKSFLDMAGRSLSCGLSESRLRK----GSRGM-DMP 368
>gb|KZV47504.1| protein STICHEL-like 3 [Dorcoceras hygrometricum]
Length = 1169
Score = 133 bits (334), Expect = 2e-33
Identities = 71/122 (58%), Positives = 81/122 (66%), Gaps = 15/122 (12%)
Frame = -3
Query: 323 SHGNNTXXXXXXXXXXXXXXRPSIATRDAETQNEMSVASNSFA--------------QEY 186
SHGN+ RP +A R+ ETQNEMSVASNSFA QE
Sbjct: 254 SHGNSLNRAKRRRFRGARRHRPYLAAREVETQNEMSVASNSFAYGRAPQKYYGKERAQEL 313
Query: 185 DGHNVTGVPRNGCGIPWNWSRIHHRGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIAD 9
D NV+G+ RNGCGIPWNWS IHHRGKSF+DMAGRS+SCGLS++RLKK GSIS+ R I D
Sbjct: 314 DDQNVSGIHRNGCGIPWNWSSIHHRGKSFLDMAGRSLSCGLSDTRLKKGGSISQGRDIPD 373
Query: 8 MP 3
MP
Sbjct: 374 MP 375
>gb|PIN06689.1| Replication factor C, subunit RFC4 [Handroanthus impetiginosus]
Length = 963
Score = 125 bits (315), Expect = 7e-31
Identities = 69/121 (57%), Positives = 79/121 (65%), Gaps = 15/121 (12%)
Frame = -3
Query: 320 HGNNTXXXXXXXXXXXXXXRPSIATRDAETQNEMSVASNSFAQ--------------EYD 183
HGNN RP IATRDAE Q EMSVASNS+AQ E++
Sbjct: 231 HGNNLNRGKRRKFRGARRNRP-IATRDAEAQIEMSVASNSYAQGRDPRIYLMEEGVHEHN 289
Query: 182 GHNVTGVPRNGCGIPWNWSRIHHRGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADM 6
G NV G P+NGCGIPWNWSRIHHRG+SF+DMAGRS+SCGL++ RLKK GS SR + DM
Sbjct: 290 GQNVNGGPKNGCGIPWNWSRIHHRGRSFLDMAGRSLSCGLTDPRLKKGGSTSRGMDMPDM 349
Query: 5 P 3
P
Sbjct: 350 P 350
>ref|XP_010655546.1| PREDICTED: protein STICHEL-like 3 isoform X2 [Vitis vinifera]
Length = 1186
Score = 121 bits (303), Expect = 3e-29
Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 15/100 (15%)
Frame = -3
Query: 257 SIATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRI 120
+I RD QNE+SVASNSFAQ EY NVT PRNGCGIPWNWSRI
Sbjct: 277 AIGLRDIGAQNELSVASNSFAQGSVCLKNEMEEEREEYGERNVTRAPRNGCGIPWNWSRI 336
Query: 119 HHRGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
HHRGK+F+DMAGRS+SCGLS+SRL++ GS+ + R ++DMP
Sbjct: 337 HHRGKTFLDMAGRSLSCGLSDSRLRRGGSVPQGRDVSDMP 376
>ref|XP_010655545.1| PREDICTED: protein STICHEL-like 3 isoform X1 [Vitis vinifera]
Length = 1227
Score = 121 bits (303), Expect = 3e-29
Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 15/100 (15%)
Frame = -3
Query: 257 SIATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRI 120
+I RD QNE+SVASNSFAQ EY NVT PRNGCGIPWNWSRI
Sbjct: 277 AIGLRDIGAQNELSVASNSFAQGSVCLKNEMEEEREEYGERNVTRAPRNGCGIPWNWSRI 336
Query: 119 HHRGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
HHRGK+F+DMAGRS+SCGLS+SRL++ GS+ + R ++DMP
Sbjct: 337 HHRGKTFLDMAGRSLSCGLSDSRLRRGGSVPQGRDVSDMP 376
>ref|XP_015875681.1| PREDICTED: protein STICHEL-like 3 [Ziziphus jujuba]
Length = 1194
Score = 119 bits (298), Expect = 1e-28
Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 15/100 (15%)
Frame = -3
Query: 257 SIATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRI 120
S+A+RD QNE+SVASN+ AQ ++D NVT PRNGCGIPWNWSRI
Sbjct: 278 SVASRDKNAQNELSVASNTLAQGSAHSRYHMEEGEDDFDEQNVTRAPRNGCGIPWNWSRI 337
Query: 119 HHRGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
HHRGK+F+D+AGRS+SCGLS+ RLKK G S+ R I+DMP
Sbjct: 338 HHRGKTFLDIAGRSLSCGLSDPRLKKGGPASQGRDISDMP 377
>ref|XP_021293962.1| protein STICHEL-like 3 isoform X3 [Herrania umbratica]
Length = 1216
Score = 117 bits (293), Expect = 7e-28
Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 15/98 (15%)
Frame = -3
Query: 251 ATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHH 114
++R+ QN++SVASNSFAQ EYD NVT PRNGCGIPWNWSRIHH
Sbjct: 280 SSREVGGQNDLSVASNSFAQGSVHPKYGMEEEENEYDQRNVTRAPRNGCGIPWNWSRIHH 339
Query: 113 RGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
RGK+F+D+AGRS SCGLS+SRL+K G++S R + +MP
Sbjct: 340 RGKTFLDIAGRSFSCGLSDSRLRKGGAVSHGRNVPEMP 377
>ref|XP_021293961.1| protein STICHEL-like 3 isoform X2 [Herrania umbratica]
Length = 1217
Score = 117 bits (293), Expect = 7e-28
Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 15/98 (15%)
Frame = -3
Query: 251 ATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHH 114
++R+ QN++SVASNSFAQ EYD NVT PRNGCGIPWNWSRIHH
Sbjct: 280 SSREVGGQNDLSVASNSFAQGSVHPKYGMEEEENEYDQRNVTRAPRNGCGIPWNWSRIHH 339
Query: 113 RGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
RGK+F+D+AGRS SCGLS+SRL+K G++S R + +MP
Sbjct: 340 RGKTFLDIAGRSFSCGLSDSRLRKGGAVSHGRNVPEMP 377
>ref|XP_021293959.1| protein STICHEL-like 3 isoform X1 [Herrania umbratica]
ref|XP_021293960.1| protein STICHEL-like 3 isoform X1 [Herrania umbratica]
Length = 1242
Score = 117 bits (293), Expect = 7e-28
Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 15/98 (15%)
Frame = -3
Query: 251 ATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHH 114
++R+ QN++SVASNSFAQ EYD NVT PRNGCGIPWNWSRIHH
Sbjct: 280 SSREVGGQNDLSVASNSFAQGSVHPKYGMEEEENEYDQRNVTRAPRNGCGIPWNWSRIHH 339
Query: 113 RGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
RGK+F+D+AGRS SCGLS+SRL+K G++S R + +MP
Sbjct: 340 RGKTFLDIAGRSFSCGLSDSRLRKGGAVSHGRNVPEMP 377
>gb|EXC68992.1| DNA polymerase III subunit [Morus notabilis]
Length = 482
Score = 115 bits (288), Expect = 1e-27
Identities = 59/99 (59%), Positives = 68/99 (68%), Gaps = 14/99 (14%)
Frame = -3
Query: 257 SIATRDAETQNEMSVASNSFAQ-------------EYDGHNVTGVPRNGCGIPWNWSRIH 117
++ +RD QNE+SVASN+ Q EYD NVT P NGCGIPWNWSRIH
Sbjct: 68 AVGSRDINVQNELSVASNTLGQGSGHPKYHMEGEEEYDEQNVTRAPGNGCGIPWNWSRIH 127
Query: 116 HRGKSFIDMAGRSISCGLSESRLKKEG-SISRRGIADMP 3
HRGK+F+DMAGRS SCGLS+SRLKK G S R IA+MP
Sbjct: 128 HRGKTFLDMAGRSFSCGLSDSRLKKGGPSGHGRDIAEMP 166
>ref|XP_010113159.2| protein STICHEL-like 3, partial [Morus notabilis]
Length = 485
Score = 115 bits (288), Expect = 1e-27
Identities = 59/99 (59%), Positives = 68/99 (68%), Gaps = 14/99 (14%)
Frame = -3
Query: 257 SIATRDAETQNEMSVASNSFAQ-------------EYDGHNVTGVPRNGCGIPWNWSRIH 117
++ +RD QNE+SVASN+ Q EYD NVT P NGCGIPWNWSRIH
Sbjct: 71 AVGSRDINVQNELSVASNTLGQGSGHPKYHMEGEEEYDEQNVTRAPGNGCGIPWNWSRIH 130
Query: 116 HRGKSFIDMAGRSISCGLSESRLKKEG-SISRRGIADMP 3
HRGK+F+DMAGRS SCGLS+SRLKK G S R IA+MP
Sbjct: 131 HRGKTFLDMAGRSFSCGLSDSRLKKGGPSGHGRDIAEMP 169
>ref|XP_016648798.1| PREDICTED: protein STICHEL-like 3 [Prunus mume]
Length = 1188
Score = 116 bits (290), Expect = 2e-27
Identities = 58/100 (58%), Positives = 70/100 (70%), Gaps = 15/100 (15%)
Frame = -3
Query: 257 SIATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRI 120
S+A+RD QN++SVASN+ AQ EY NVT PRNGCGIPWNWSRI
Sbjct: 277 SVASRDFGGQNDLSVASNTLAQGSAHPKYHMERGEDEYGEQNVTRAPRNGCGIPWNWSRI 336
Query: 119 HHRGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
HHRGK+F+D+AGRS SCGLS+SR KK+G + R I+DMP
Sbjct: 337 HHRGKTFLDIAGRSFSCGLSDSRFKKDGMAAHARNISDMP 376
>ref|XP_020418197.1| protein STICHEL-like 3 [Prunus persica]
ref|XP_020418198.1| protein STICHEL-like 3 [Prunus persica]
gb|ONI10771.1| hypothetical protein PRUPE_4G067700 [Prunus persica]
gb|ONI10772.1| hypothetical protein PRUPE_4G067700 [Prunus persica]
gb|ONI10773.1| hypothetical protein PRUPE_4G067700 [Prunus persica]
gb|ONI10774.1| hypothetical protein PRUPE_4G067700 [Prunus persica]
Length = 1189
Score = 116 bits (290), Expect = 2e-27
Identities = 58/100 (58%), Positives = 70/100 (70%), Gaps = 15/100 (15%)
Frame = -3
Query: 257 SIATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRI 120
S+A+RD QN++SVASN+ AQ EY NVT PRNGCGIPWNWSRI
Sbjct: 278 SVASRDFGGQNDLSVASNTLAQGSAHPKYHMERGEDEYGEQNVTRAPRNGCGIPWNWSRI 337
Query: 119 HHRGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
HHRGK+F+D+AGRS SCGLS+SR KK+G + R I+DMP
Sbjct: 338 HHRGKTFLDIAGRSFSCGLSDSRFKKDGMAAHARNISDMP 377
>ref|XP_021813184.1| protein STICHEL-like 3 [Prunus avium]
Length = 1191
Score = 116 bits (290), Expect = 2e-27
Identities = 58/100 (58%), Positives = 70/100 (70%), Gaps = 15/100 (15%)
Frame = -3
Query: 257 SIATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRI 120
S+A+RD QN++SVASN+ AQ EY NVT PRNGCGIPWNWSRI
Sbjct: 278 SVASRDFGGQNDLSVASNNLAQGSAHPKYHMERGEDEYGEQNVTRAPRNGCGIPWNWSRI 337
Query: 119 HHRGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
HHRGK+F+D+AGRS SCGLS+SR KK+G + R I+DMP
Sbjct: 338 HHRGKTFLDIAGRSFSCGLSDSRFKKDGMAAHARNISDMP 377
>ref|XP_023874952.1| protein STICHEL-like 3 [Quercus suber]
gb|POE82906.1| protein stichel-like 3 [Quercus suber]
Length = 1193
Score = 116 bits (290), Expect = 2e-27
Identities = 59/98 (60%), Positives = 69/98 (70%), Gaps = 15/98 (15%)
Frame = -3
Query: 251 ATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHH 114
A+RD QNE+SVASN+ AQ EY NVT PRNGCGIPWNWSRIHH
Sbjct: 278 ASRDVGAQNELSVASNTLAQGSARAKYLMEEGEEEYGNANVTRAPRNGCGIPWNWSRIHH 337
Query: 113 RGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
RGK+ +DMAGRS+SCGLS+SRLKK GS + R ++DMP
Sbjct: 338 RGKTILDMAGRSLSCGLSDSRLKKGGSTAHGREMSDMP 375
>ref|XP_007025300.2| PREDICTED: protein STICHEL-like 3 [Theobroma cacao]
Length = 1216
Score = 116 bits (290), Expect = 2e-27
Identities = 57/98 (58%), Positives = 70/98 (71%), Gaps = 15/98 (15%)
Frame = -3
Query: 251 ATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHH 114
++R+ QNE+SVASNSFAQ EYD NVT PRNGCGIPWNWSRIHH
Sbjct: 280 SSREVGGQNELSVASNSFAQGSVHPKYGMEEEENEYDERNVTRAPRNGCGIPWNWSRIHH 339
Query: 113 RGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
RGK+ +D+AGRS SCGLS+SRL+K G++S R + +MP
Sbjct: 340 RGKTILDIAGRSFSCGLSDSRLRKGGAVSHGRNVPEMP 377
>gb|EOY27922.1| AAA-type ATPase family protein isoform 1 [Theobroma cacao]
Length = 1216
Score = 116 bits (290), Expect = 2e-27
Identities = 57/98 (58%), Positives = 70/98 (71%), Gaps = 15/98 (15%)
Frame = -3
Query: 251 ATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHH 114
++R+ QNE+SVASNSFAQ EYD NVT PRNGCGIPWNWSRIHH
Sbjct: 280 SSREVGGQNELSVASNSFAQGSVHPKYGMEEEENEYDERNVTRAPRNGCGIPWNWSRIHH 339
Query: 113 RGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
RGK+ +D+AGRS SCGLS+SRL+K G++S R + +MP
Sbjct: 340 RGKTILDIAGRSFSCGLSDSRLRKGGAVSHGRNVPEMP 377
>gb|EOY27923.1| AAA-type ATPase family protein isoform 2 [Theobroma cacao]
Length = 1219
Score = 116 bits (290), Expect = 2e-27
Identities = 57/98 (58%), Positives = 70/98 (71%), Gaps = 15/98 (15%)
Frame = -3
Query: 251 ATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHH 114
++R+ QNE+SVASNSFAQ EYD NVT PRNGCGIPWNWSRIHH
Sbjct: 280 SSREVGGQNELSVASNSFAQGSVHPKYGMEEEENEYDERNVTRAPRNGCGIPWNWSRIHH 339
Query: 113 RGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
RGK+ +D+AGRS SCGLS+SRL+K G++S R + +MP
Sbjct: 340 RGKTILDIAGRSFSCGLSDSRLRKGGAVSHGRNVPEMP 377
>gb|EOY27924.1| AAA-type ATPase family protein isoform 3 [Theobroma cacao]
Length = 1221
Score = 116 bits (290), Expect = 2e-27
Identities = 57/98 (58%), Positives = 70/98 (71%), Gaps = 15/98 (15%)
Frame = -3
Query: 251 ATRDAETQNEMSVASNSFAQ--------------EYDGHNVTGVPRNGCGIPWNWSRIHH 114
++R+ QNE+SVASNSFAQ EYD NVT PRNGCGIPWNWSRIHH
Sbjct: 280 SSREVGGQNELSVASNSFAQGSVHPKYGMEEEENEYDERNVTRAPRNGCGIPWNWSRIHH 339
Query: 113 RGKSFIDMAGRSISCGLSESRLKKEGSISR-RGIADMP 3
RGK+ +D+AGRS SCGLS+SRL+K G++S R + +MP
Sbjct: 340 RGKTILDIAGRSFSCGLSDSRLRKGGAVSHGRNVPEMP 377