BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00031479
         (851 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU30026.1| hypothetical protein TSUD_161120 [Trifolium subt...    99   9e-40
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]           105   8e-38
gb|PNY15111.1| ribonuclease H [Trifolium pratense]                     96   2e-36
emb|CDP14470.1| unnamed protein product [Coffea canephora]            100   2e-36
gb|KYP71332.1| Putative ribonuclease H protein At1g65750 family ...    87   3e-36
ref|XP_024195790.1| uncharacterized protein LOC112198938 [Rosa c...   108   4e-36
ref|XP_023905101.1| uncharacterized protein LOC112016863 [Quercu...    95   7e-36
dbj|GAU51235.1| hypothetical protein TSUD_412370 [Trifolium subt...    96   7e-36
gb|OIT26744.1| putative mitochondrial protein [Nicotiana attenuata]   103   7e-36
dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subte...   104   1e-35
ref|XP_024178198.1| uncharacterized protein LOC112184155 [Rosa c...   104   1e-35
gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]            97   2e-35
gb|PRQ56718.1| putative RNA-directed DNA polymerase [Rosa chinen...   102   3e-35
gb|KYP44138.1| Putative ribonuclease H protein At1g65750 family ...    94   4e-35
gb|KYP42577.1| hypothetical protein KK1_036020 [Cajanus cajan]         85   7e-35
gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinen...   104   1e-34
gb|PNX95041.1| ribonuclease H, partial [Trifolium pratense]            96   2e-34
ref|XP_024172006.1| uncharacterized protein LOC112178017 [Rosa c...   104   2e-34
gb|KYP76107.1| Putative ribonuclease H protein At1g65750 [Cajanu...    86   2e-34
gb|PNY14301.1| ribonuclease H [Trifolium pratense]                     99   3e-34

>dbj|GAU30026.1| hypothetical protein TSUD_161120 [Trifolium subterraneum]
          Length = 1957

 Score = 99.4 bits (246), Expect(3) = 9e-40
 Identities = 46/106 (43%), Positives = 66/106 (62%)
 Frame = -3

Query: 651  AGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKIN 472
            AGK+ L+K+V  A+P Y++SC+K+ IG C+ I  + AK WW   D  Q K+HW SW  + 
Sbjct: 1134 AGKETLIKAVAQAIPNYIMSCYKIPIGCCRDIEGMLAKFWW-GTDERQRKVHWLSWENLG 1192

Query: 471  VPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
              K + G+GF     FN+AL+ K   RI+ N   L++K  K+RYFP
Sbjct: 1193 KIKNSGGMGFRGFEEFNQALLGKQCWRIIQNQESLIAKVFKSRYFP 1238



 Score = 63.9 bits (154), Expect(3) = 9e-40
 Identities = 32/102 (31%), Positives = 52/102 (50%)
 Frame = -2

Query: 355  FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
            F+S+ FP    +E  I +  S+ WRS  S + T +  +R+ IG+ ++++I    W+P   
Sbjct: 1232 FKSRYFPRTNFMEAQIGYQPSYAWRSMFSAKKTIEMGLRWTIGNGQNVRIWKDSWLPNQA 1291

Query: 175  NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLVEIALEQAET 50
             F+  +P     D  + S+L+D    SWN  LV     Q ET
Sbjct: 1292 GFKVCSPVNVLADDAYVSQLIDPISRSWNMNLVRNIFSQFET 1333



 Score = 50.4 bits (119), Expect(3) = 9e-40
 Identities = 23/48 (47%), Positives = 29/48 (60%)
 Frame = -2

Query: 802  ICLSFSGINIQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
            IC       +   SRYLGLP+  GRSKKE+F FV + V +K+  WK K
Sbjct: 1082 ICNKIGVKAVTSHSRYLGLPVLFGRSKKEIFSFVKDRVWRKIKGWKEK 1129


>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
          Length = 894

 Score =  105 bits (261), Expect(3) = 8e-38
 Identities = 50/106 (47%), Positives = 67/106 (63%)
 Frame = -3

Query: 651 AGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKIN 472
           AGK+ L+KSV  A+P Y++SC+KL  G C  I  + AK WW   +  Q KIHW SWNK+ 
Sbjct: 383 AGKETLIKSVAQAIPNYIMSCYKLPTGCCDNIEAMLAKFWWGTTE-KQRKIHWVSWNKLG 441

Query: 471 VPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
             K   GLGF     FN+AL+ K   R++ NP+ L++K  K+RYFP
Sbjct: 442 KAKSKGGLGFRSFEDFNKALLGKQCWRLLQNPDSLLAKVFKSRYFP 487



 Score = 54.3 bits (129), Expect(3) = 8e-38
 Identities = 25/94 (26%), Positives = 48/94 (51%)
 Frame = -2

Query: 355 FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
           F+S+ FP    ++ ++ +  S+ WRS  + R       R+ IG+ K + I N  W+P  D
Sbjct: 481 FKSRYFPRSKFMDANVGYQPSYAWRSLCNSREVIDVGARWLIGNGKDVHIWNDKWLPAQD 540

Query: 175 NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLVE 74
            F+  +P  +       S+L++ +   W++ LV+
Sbjct: 541 KFKVWSPVSNLAPNAMVSDLINLETKMWDKNLVQ 574



 Score = 47.8 bits (112), Expect(3) = 8e-38
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = -2

Query: 802 ICLSFSGINIQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           IC       +   S+YLGLP+  GRSKKE+F  V E + KK+  WK K
Sbjct: 331 ICNKIDVKAVTNHSKYLGLPVIFGRSKKEIFASVQERIWKKIKGWKEK 378


>gb|PNY15111.1| ribonuclease H [Trifolium pratense]
          Length = 1334

 Score = 95.5 bits (236), Expect(3) = 2e-36
 Identities = 43/106 (40%), Positives = 69/106 (65%)
 Frame = -3

Query: 651  AGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKIN 472
            AGK++L+K+V  A+P Y++ C+KL    CQ+I  + AK WW +K   + KIHW SW +++
Sbjct: 762  AGKEILIKAVAQAIPNYIMGCYKLPNSCCQEIETMLAKFWWGSKG-GERKIHWMSWERLS 820

Query: 471  VPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
              K + G+GF  I+ FN+AL+ K   R+++    L+ +  K+RYFP
Sbjct: 821  KTKKDGGMGFRGINNFNKALLGKHCWRLMTGEESLMGRIFKSRYFP 866



 Score = 58.2 bits (139), Expect(3) = 2e-36
 Identities = 31/93 (33%), Positives = 47/93 (50%)
 Frame = -2

Query: 355  FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
            F+S+ FP    LE  I +  S+ WRS  S  +  K   R+ IG+ +S++IR   W+P   
Sbjct: 860  FKSRYFPRTSFLEAKIGYQPSYAWRSIQSATDVMKLGTRWRIGNGESVKIREDRWLPNQV 919

Query: 175  NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLV 77
             F+  +   +  +    S L+D D   WNR LV
Sbjct: 920  GFKVWSRGEELENGALVSALIDPDTKQWNRQLV 952



 Score = 48.9 bits (115), Expect(3) = 2e-36
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -2

Query: 763 SRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           S+YLGLP+  GRSKK +F FV++ V KKL  WK K
Sbjct: 723 SKYLGLPVVFGRSKKIIFSFVIDRVWKKLKGWKEK 757


>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score =  100 bits (250), Expect(3) = 2e-36
 Identities = 49/107 (45%), Positives = 73/107 (68%)
 Frame = -3

Query: 654 SAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKI 475
           +AGK+V++K+V  A+P Y +S FKL    C+ I  L A  WW   +  ++K+HW SW K+
Sbjct: 82  TAGKEVMLKAVSMAMPTYAMSVFKLPRKLCKDISALMANYWWGEAN-GKNKLHWLSWRKM 140

Query: 474 NVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
           ++ +   GLGF DI  +N+AL+ K + RI++ PNLL+SK L+ARYFP
Sbjct: 141 SLSRNAGGLGFKDIEAYNKALLGKQVWRILTKPNLLISKVLRARYFP 187



 Score = 51.2 bits (121), Expect(3) = 2e-36
 Identities = 18/53 (33%), Positives = 35/53 (66%)
 Frame = -2

Query: 811 QQAICLSFSGINIQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNKFI 653
           +Q +C +  G+      +YLGLP+ I R+K+++F F+ E++ +K+  W+NK +
Sbjct: 28  RQDVCSALGGMTEMTQGKYLGLPMVISRTKEQIFGFIKENIKRKMHDWRNKLL 80



 Score = 50.4 bits (119), Expect(3) = 2e-36
 Identities = 27/88 (30%), Positives = 44/88 (50%)
 Frame = -2

Query: 349 SQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSDNF 170
           ++ FP D +L      NASW+W+  L  R   +  +   IG+ +S  I    WIP S + 
Sbjct: 183 ARYFPKDSILTCRPKQNASWIWQGLLGARRVVEKGVIRRIGNGRSTSIWGHRWIPGSSSG 242

Query: 169 RTSTPSPDSFDLFWASELLDSDGNSWNR 86
           R ++  P S++L   +EL+    + W R
Sbjct: 243 RPTSLGPQSYNLKMVNELISH--HRWKR 268


>gb|KYP71332.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 444

 Score = 87.0 bits (214), Expect(3) = 3e-36
 Identities = 42/111 (37%), Positives = 65/111 (58%)
 Frame = -3

Query: 666 KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
           K+   AGK+ L+K+VL ALP Y +S F +   T  +I +L    WW A       I W  
Sbjct: 135 KSLSKAGKETLIKAVLQALPSYAMSVFMIPSCTIDEIEKLLNAFWWGANSNKHKGIKWMR 194

Query: 486 WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
           W ++ + K+  GLGF ++  FN A++ K   R++SNPN L+S+  +A+Y+P
Sbjct: 195 WERLAISKLEGGLGFKNLSAFNLAMLGKQAWRLLSNPNSLISRIYQAKYYP 245



 Score = 64.3 bits (155), Expect(3) = 3e-36
 Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = -2

Query: 355 FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
           ++++ +P    L   + HN S+ W+S  S ++  KN IR+ +G+  +I +   PW+  +D
Sbjct: 239 YQAKYYPDGSFLNASLGHNPSYTWKSLWSTQHLLKNGIRWRLGNGNTIPVWGEPWVKYND 298

Query: 175 NFRTSTP-SPDSFDLFWASELLDSDGNSWNRPLVEIALEQ 59
           ++ +  P  P +   F  S+L+  D N WN  L+   L++
Sbjct: 299 SYHSIHPHDPSNSQAFKVSDLMSIDKNGWNDVLINSLLDE 338



 Score = 50.4 bits (119), Expect(3) = 3e-36
 Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
 Frame = -2

Query: 781 INIQK---TSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           +++QK   T +YLGLP  IGR+K EVF+F+ E + KKL SW +K
Sbjct: 92  LHVQKCVTTGKYLGLPSMIGRNKNEVFRFIKERIWKKLQSWSHK 135


>ref|XP_024195790.1| uncharacterized protein LOC112198938 [Rosa chinensis]
          Length = 1175

 Score =  108 bits (271), Expect(3) = 4e-36
 Identities = 50/111 (45%), Positives = 77/111 (69%)
 Frame = -3

Query: 666 KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
           KT  +AGK+VL+K+V+ ++P YV+SCF+L    C ++ +L A+ WW  +  ++ KIHW +
Sbjct: 623 KTLSTAGKEVLIKAVVQSIPTYVMSCFELPKHLCDEMHRLMARFWW-GEFGAERKIHWVA 681

Query: 486 WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
           W+K+  PK   GLGF D+HLFN AL+ K   R++  P+ L+++  KARYFP
Sbjct: 682 WDKLCAPKKEGGLGFRDMHLFNTALLAKQGWRLICRPDSLLAQVFKARYFP 732



 Score = 54.3 bits (129), Expect(3) = 4e-36
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = -2

Query: 355  FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
            F+++ FP    +   +   AS+ WRS +  R+  K  +RF++G+ + I I N PW+PL  
Sbjct: 726  FKARYFPNTDFMHAVLHKGASFSWRSIMKGRDLLKKGLRFQVGNGEDISIWNDPWVPLPY 785

Query: 175  NFRT-STPSPDSFDLFWASELLDSDGNSWNRPLVEIALEQAETLEHIMFSALEL 17
             F+  S P   + DL    +L+D +   W            E L H +F+ +E+
Sbjct: 786  RFKPFSIPMQGAEDL-RVVDLIDEETGDWQ-----------EWLLHELFTPMEV 827



 Score = 38.1 bits (87), Expect(3) = 4e-36
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 775 IQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           + K  +YLGLP  +  SK E F+++V+ V  +   W+NK
Sbjct: 585 VDKHDKYLGLPTELSYSKDEAFRYLVDRVRTRTQGWRNK 623


>ref|XP_023905101.1| uncharacterized protein LOC112016863 [Quercus suber]
 ref|XP_023916048.1| uncharacterized protein LOC112027624 [Quercus suber]
          Length = 1377

 Score = 95.1 bits (235), Expect(3) = 7e-36
 Identities = 43/112 (38%), Positives = 70/112 (62%)
 Frame = -3

Query: 669  GKTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWK 490
            GK    AG++VL+KSV+ A+P + + CFKL IG C  I  L  K WW  +  ++ K+HW 
Sbjct: 791  GKLLSQAGREVLIKSVIQAIPSFAMGCFKLPIGLCNDIEVLIRKFWWGERG-NRRKVHWL 849

Query: 489  SWNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
             W+++   KM  G+GF D+ ++N++L+ K   R++++   L  +  KAR+FP
Sbjct: 850  KWDEMTKSKMVGGMGFRDLAMYNDSLLAKQAWRLLTDKGSLFYRIFKARFFP 901



 Score = 59.3 bits (142), Expect(3) = 7e-36
 Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
 Frame = -2

Query: 355  FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
            F+++ FP+  ++E +   ++S+ W+S L  R+      ++ IG+ K++QI    W+P  +
Sbjct: 895  FKARFFPHCTIMEAEDSRSSSYAWKSILHGRDVILRGAKWRIGNGKTVQIYKHSWLPQKN 954

Query: 175  NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLVE--IALEQAETLEHIMFSALELKPS 8
            +    +P  DS +      L+D+D   WN  +VE     ++AE ++ I  +  E + S
Sbjct: 955  HDLVLSPVVDSMEEATVDVLIDTDTKQWNNDMVEGLFTPQEAEIIKKIPLARTETEDS 1012



 Score = 46.2 bits (108), Expect(3) = 7e-36
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 826 SSPSLQQAICLSFSGIN-IQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNKFI 653
           S+P   + I     G+  IQ   +YLGLP  +GR KK  F ++ E V KKL  W+ K +
Sbjct: 736 STPDDTKEIIRGLLGVQEIQHYEKYLGLPSLVGRGKKASFNYIKEKVWKKLQGWEGKLL 794


>dbj|GAU51235.1| hypothetical protein TSUD_412370 [Trifolium subterraneum]
          Length = 742

 Score = 95.5 bits (236), Expect(3) = 7e-36
 Identities = 43/106 (40%), Positives = 69/106 (65%)
 Frame = -3

Query: 651 AGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKIN 472
           AGK++L+K+V  A+P Y++SC+KL  GTCQ+I  + AK WW +K+  + K HW SW +++
Sbjct: 476 AGKELLIKAVAQAVPNYIMSCYKLPDGTCQEIEAMLAKFWWGSKE-DKRKTHWMSWERLS 534

Query: 471 VPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
             K   G+GF     FN+AL+ K   R++   + L+ +  K+RY+P
Sbjct: 535 RTKQKGGMGFRGFKEFNKALLGKHCWRLMQEKDSLLERVFKSRYYP 580



 Score = 58.9 bits (141), Expect(3) = 7e-36
 Identities = 26/95 (27%), Positives = 50/95 (52%)
 Frame = -2

Query: 355 FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
           F+S+ +P +  LE  + +  S+ WR+ LS +   +   R+ IG+   ++I    W+P   
Sbjct: 574 FKSRYYPRNSFLEATVGYQPSYAWRNILSAKEVVEKGARWRIGNGLKVKIWKDSWLPRQV 633

Query: 175 NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLVEI 71
           +F+  +P+    DL   S+L+D D   W++  + I
Sbjct: 634 DFKVKSPNQGLEDLALVSDLIDLDSKQWDKGTMPI 668



 Score = 46.2 bits (108), Expect(3) = 7e-36
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = -2

Query: 763 SRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNKFI 653
           S+YLGLP+  GRSKK +F   ++ V KKL  WK  F+
Sbjct: 437 SKYLGLPVAFGRSKKVIFSLAIDRVWKKLKGWKENFL 473


>gb|OIT26744.1| putative mitochondrial protein [Nicotiana attenuata]
          Length = 233

 Score =  103 bits (258), Expect(3) = 7e-36
 Identities = 51/112 (45%), Positives = 72/112 (64%)
 Frame = -3

Query: 669 GKTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWK 490
           GK    AGK+VL+KSVL A+P Y +SCF++  G C++I  L +  WW   +  + K+H++
Sbjct: 38  GKFLSQAGKEVLLKSVLAAIPSYAMSCFQIPDGICKEITSLFSNFWWGTNN-DKRKMHFE 96

Query: 489 SWNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
            W K+  PK   GLGF D+  FN AL+ K   RI++ P+LLVS  LK +YFP
Sbjct: 97  KWEKLCEPKFKGGLGFRDLKAFNMALLVKLAWRILTKPDLLVSHVLKGKYFP 148



 Score = 49.7 bits (117), Expect(3) = 7e-36
 Identities = 23/85 (27%), Positives = 43/85 (50%)
 Frame = -2

Query: 352 ESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSDN 173
           + + FP +  L+V I    SW+W+S L  R+     +R+ + + KS+++   PW+P  ++
Sbjct: 143 KGKYFPKESFLQVPISKYTSWVWKSILWGRDLLSRGVRWNVSNGKSVRVWRDPWLPRDNS 202

Query: 172 FRTSTPSPDSFDLFWASELLDSDGN 98
           F   +    +      SEL+D   N
Sbjct: 203 FYPLSMMSGTATNMKVSELIDDSTN 227



 Score = 47.0 bits (110), Expect(3) = 7e-36
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = -2

Query: 757 YLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNKFI 653
           YLGLP  +GRSKKE+  F+ + +L K+  WK KF+
Sbjct: 7   YLGLPAIVGRSKKEMLAFIKDRILSKIKGWKGKFL 41


>dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subterraneum]
          Length = 1626

 Score =  104 bits (259), Expect(3) = 1e-35
 Identities = 50/106 (47%), Positives = 67/106 (63%)
 Frame = -3

Query: 651  AGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKIN 472
            AGK+ L+KSV  A+P Y++SC+KL  G C  I  + AK WW   +  Q KIHW SWNK+ 
Sbjct: 1056 AGKETLIKSVAQAIPNYLMSCYKLPTGCCDNIEAMLAKFWWGTTE-KQRKIHWVSWNKLG 1114

Query: 471  VPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
              K   GLGF     FN+AL+ K   R++ NP+ L++K  K+RYFP
Sbjct: 1115 KAKSKGGLGFRSFEDFNKALLGKQCWRLLQNPDSLLAKVFKSRYFP 1160



 Score = 51.6 bits (122), Expect(3) = 1e-35
 Identities = 23/93 (24%), Positives = 46/93 (49%)
 Frame = -2

Query: 355  FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
            F+S+ FP    ++  + +  S+ WRS  + R       R+ IG+ + + I N  W+P  D
Sbjct: 1154 FKSRYFPRSNFMDASVGYQPSYAWRSLCNAREVIDMGARWLIGNGQDVHIWNDKWLPEQD 1213

Query: 175  NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLV 77
             F+  +P  +       S+L++    +W++ L+
Sbjct: 1214 KFKVWSPVSNLVPNAMVSDLINPVTKAWDKNLI 1246



 Score = 43.9 bits (102), Expect(3) = 1e-35
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = -2

Query: 802  ICLSFSGINIQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
            IC       +   S+YL LP+  GRSKKE+F  V E + KK+  WK K
Sbjct: 1004 ICNKIDVKAVTSHSKYLVLPVIFGRSKKEIFANVQERIWKKIKGWKEK 1051


>ref|XP_024178198.1| uncharacterized protein LOC112184155 [Rosa chinensis]
          Length = 465

 Score =  104 bits (260), Expect(3) = 1e-35
 Identities = 49/111 (44%), Positives = 75/111 (67%)
 Frame = -3

Query: 666 KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
           KT  +AGK+VL+K+V+ ++P YV++CF+L    C ++ +L A+ WW  +   + KIHW +
Sbjct: 74  KTLSTAGKEVLIKAVVQSIPTYVMNCFELPKHLCHEMHRLMARFWW-GEFGEERKIHWVA 132

Query: 486 WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
           W K+   K   GLGF D+HLFN AL+ K   R++  P+ L+++ LKARYFP
Sbjct: 133 WEKLCASKKEGGLGFRDMHLFNIALLAKQGWRLICRPDSLLAQVLKARYFP 183



 Score = 55.8 bits (133), Expect(3) = 1e-35
 Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
 Frame = -2

Query: 352 ESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSDN 173
           +++ FP    ++ ++   AS+ WRS L  R+  +  +RF++G+ ++I + N PW+PL   
Sbjct: 178 KARYFPQTDFMQAELHKGASFTWRSILKGRDLLRKGLRFQVGNGENISVWNDPWVPLPYR 237

Query: 172 FRTSTPSPDSFDLFWASELLDSD-GNSWNRPLVEI 71
           FR  +      + F  ++ +DS+ G  W   L+ +
Sbjct: 238 FRPFSLPMQGTEEFKVADFIDSEAGAFWLHGLLNL 272



 Score = 39.3 bits (90), Expect(3) = 1e-35
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -2

Query: 820 PSLQQAICLSFSGIN-IQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           P  +Q    S  G+  + K  +YLGLP  +  SK E F+++V+ V K+   W++K
Sbjct: 20  PRWKQDELASLLGVRRVDKHDKYLGLPTELSYSKDEAFRYLVDRVRKRTQGWRDK 74


>gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1068

 Score = 96.7 bits (239), Expect(3) = 2e-35
 Identities = 44/106 (41%), Positives = 70/106 (66%)
 Frame = -3

Query: 651  AGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKIN 472
            AGK+ L+K+V  A+P Y++SC+K+  G+C  I  + +K WW + D  ++KIHW SW+++ 
Sbjct: 754  AGKETLIKAVAQAIPSYIMSCYKIPEGSCANIESMLSKFWWGSSD-QKNKIHWMSWDRLG 812

Query: 471  VPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
              K   GLGF     FN+AL+ K   R++SN + L+S+  K++YFP
Sbjct: 813  RAKNKGGLGFRGFSDFNKALLGKQCWRLMSNEDSLLSRVFKSKYFP 858



 Score = 52.0 bits (123), Expect(3) = 2e-35
 Identities = 27/101 (26%), Positives = 51/101 (50%)
 Frame = -2

Query: 355  FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
            F+S+ FP    L+    +  S+ WRS  + ++     +R+ IG+ + ++I   PW+P   
Sbjct: 852  FKSKYFPRSCFLKSKCGYQPSYAWRSLFNAKSVIDLGLRWTIGNGQQVKIWKDPWLPELS 911

Query: 175  NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLVEIALEQAE 53
            +F+  +P  +  +    +EL+D D   W R LV  +  + E
Sbjct: 912  SFKVWSPVCNLDEDAVVAELIDVDLKKWKRELVMNSFNEFE 952



 Score = 50.8 bits (120), Expect(3) = 2e-35
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -2

Query: 802 ICLSFSGINIQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           IC       +   SRYLGLP+  GRSKKEVF FV + + KK+  WK K
Sbjct: 702 ICNKIEVKAVTSHSRYLGLPVIFGRSKKEVFAFVQDRIWKKVKGWKEK 749


>gb|PRQ56718.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1069

 Score =  102 bits (253), Expect(3) = 3e-35
 Identities = 47/111 (42%), Positives = 74/111 (66%)
 Frame = -3

Query: 666  KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
            KT  +AGK+VL+K+V  A+P YV+SCF++    C ++ ++ A+ WW   +    KIHW +
Sbjct: 801  KTLSTAGKEVLIKAVAQAIPSYVMSCFEVPRYLCDEMHRVIAQFWW-GDEGDARKIHWIA 859

Query: 486  WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
            W K+  PK   GLGF ++H+FN AL+ K   R++  P+ +++K LKA+YFP
Sbjct: 860  WEKLCYPKCQGGLGFRNMHIFNLALLTKQGWRLIQQPDSIIAKLLKAKYFP 910



 Score = 57.0 bits (136), Expect(3) = 3e-35
 Identities = 25/87 (28%), Positives = 48/87 (55%)
 Frame = -2

Query: 352  ESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSDN 173
            +++ FP    LE ++    S+ WRS L  R   +  +RF++GD +SI++ + PW+P+  +
Sbjct: 905  KAKYFPRCSFLEAELKGGESYTWRSILLGRKVLEKGMRFQVGDGESIRVWDDPWVPVPYS 964

Query: 172  FRTSTPSPDSFDLFWASELLDSDGNSW 92
            FR  +P  +  +    ++L+D     W
Sbjct: 965  FRPYSPVMEGLEELRVADLIDPITKDW 991



 Score = 39.7 bits (91), Expect(3) = 3e-35
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -2

Query: 814 LQQAICLSFSGINIQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           +Q+ I      I + K  +YLGLP+ +  SK E F F+ E +  +   W+ K
Sbjct: 750 MQEGIATILGVIRVDKHDKYLGLPIELSYSKVEAFGFLNEKIRNRTQGWREK 801


>gb|KYP44138.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 513

 Score = 93.6 bits (231), Expect(3) = 4e-35
 Identities = 45/111 (40%), Positives = 68/111 (61%)
 Frame = -3

Query: 666 KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
           K+   AGK+ L+KSVL ALP Y +S F +   T  +I +L    WW A   +   I W  
Sbjct: 270 KSLSKAGKETLIKSVLQALPSYAMSVFMIPPRTIDEIEKLLNAFWWGANSNTHKGIKWMR 329

Query: 486 WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
           W+K+ +PK   GLGF ++ +FN A++ K   R+++NPN L+SK  +A+Y+P
Sbjct: 330 WDKLTIPKPEGGLGFKNLSVFNLAILGKQAWRLLTNPNSLISKIYRAKYYP 380



 Score = 55.1 bits (131), Expect(3) = 4e-35
 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
 Frame = -2

Query: 355 FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
           + ++ +P    L   + HN S+ W+S  S ++  KN  R+ +G+  +I +   PWI  ++
Sbjct: 374 YRAKYYPDGNFLNAPLGHNPSYTWKSLWSTQHLLKNGSRWRLGNGNTIPVWGEPWIKYNN 433

Query: 175 NFRTSTP-SPDSFDLFWASELLDSDGNSWNRPLVEIALEQAETLEHIM 35
           N+    P  P +      S+L+  D   WN  L+  ++   +T  HI+
Sbjct: 434 NYHCIHPHDPSNSHDLKVSDLMSKDKLDWNADLIN-SIFDIDTSNHIL 480



 Score = 49.3 bits (116), Expect(3) = 4e-35
 Identities = 20/38 (52%), Positives = 29/38 (76%)
 Frame = -2

Query: 772 QKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           + TS+YLGLP  IGR+K +VF+++ E + KKL SW +K
Sbjct: 233 ETTSKYLGLPSMIGRNKNDVFRYIKERIWKKLQSWSHK 270


>gb|KYP42577.1| hypothetical protein KK1_036020 [Cajanus cajan]
          Length = 427

 Score = 84.7 bits (208), Expect(3) = 7e-35
 Identities = 40/111 (36%), Positives = 63/111 (56%)
 Frame = -3

Query: 666 KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
           K+   AGK+ L+K++L ALP Y +S F +   T  +I +L    WW A       I W  
Sbjct: 228 KSLSKAGKETLIKAILQALPSYAMSVFMIPNRTIDEIEKLLNAFWWGANSNKHKGIKWMR 287

Query: 486 WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
           W ++ + K+  GLGF ++  FN A++ K   R +SNPN L+S+  + +Y+P
Sbjct: 288 WERLAISKLEGGLGFKNLSAFNLAMLSKQAWRFLSNPNSLISRIYQEKYYP 338



 Score = 62.0 bits (149), Expect(3) = 7e-35
 Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = -2

Query: 355 FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
           ++ + +P    L   + HN S+ W+S  S ++  KN IR+ +G+  +I +   PWI  +D
Sbjct: 332 YQEKYYPEGSFLNASLGHNPSYTWKSLWSTQHLLKNGIRWRLGNGNTIPVWGEPWIKYND 391

Query: 175 NFR-TSTPSPDSFDLFWASELLDSDGNSWNRPLV 77
           N+       P +   F  S+L+ +D N WN  L+
Sbjct: 392 NYHCIHHHDPSNSQAFKVSDLMSNDKNGWNDVLI 425



 Score = 50.4 bits (119), Expect(3) = 7e-35
 Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 3/47 (6%)
 Frame = -2

Query: 790 FSGINIQK---TSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           ++ +++QK   T +YLG+P  IGR+K EVF+F+ E + KKL SW +K
Sbjct: 182 YNTLHVQKCVTTGKYLGIPSMIGRNKNEVFRFIKERIWKKLQSWSHK 228


>gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1228

 Score =  104 bits (259), Expect(3) = 1e-34
 Identities = 49/111 (44%), Positives = 75/111 (67%)
 Frame = -3

Query: 666 KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
           KT  +AGK++++K+V  ++P YV+SCF+L    C ++ +L A+ WW  K  +  KIHW +
Sbjct: 633 KTLSAAGKEIMIKAVAQSIPTYVMSCFELPKHLCLEMHRLMAQFWWGDKS-NDKKIHWLA 691

Query: 486 WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
           W K+ VPK   GLGF ++  FN+AL+ K   RI+ NPN L+++  KA+YFP
Sbjct: 692 WEKLCVPKAEGGLGFRNMVQFNQALLAKQGWRIIQNPNSLLARLYKAKYFP 742



 Score = 50.8 bits (120), Expect(3) = 1e-34
 Identities = 21/94 (22%), Positives = 47/94 (50%)
 Frame = -2

Query: 355  FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
            ++++ FP    ++ +    +S+ W+S L  R   +  +R ++G+   I +    W+PL  
Sbjct: 736  YKAKYFPNCDFMKAEASSGSSYAWKSILFGRELLRKGLRLQVGNGSQIAVWTDQWLPLPH 795

Query: 175  NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLVE 74
            +FR  +   +  +     EL+D + N W+  L++
Sbjct: 796  SFRPISTPKEGLETLRVDELIDQEENEWHMFLLQ 829



 Score = 41.2 bits (95), Expect(3) = 1e-34
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = -2

Query: 811 QQAICLSFSGINIQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           Q  +  S   + + K  +YLGLP  I  SK E F F+ E V K+   W+ K
Sbjct: 583 QDELAASLRVLRVDKHDKYLGLPTEISYSKSEAFNFLSEKVRKRTQGWRAK 633


>gb|PNX95041.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1348

 Score = 95.5 bits (236), Expect(3) = 2e-34
 Identities = 45/111 (40%), Positives = 71/111 (63%)
 Frame = -3

Query: 666  KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
            K+   AGK+VL+K+V  A+P YV+SCFK+    C++I  + A  WW +K+  Q K+HW S
Sbjct: 871  KSLSRAGKEVLIKAVAQAIPNYVMSCFKIPNDCCKEIESMLANFWWGSKEGGQ-KMHWMS 929

Query: 486  WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
            W++++  KM  G+GF     FN+AL+ K   R++S    L+ +  K+RY+P
Sbjct: 930  WDRMSSSKMKGGMGFRGFSNFNKALLGKQCWRLISEEESLLGRIFKSRYYP 980



 Score = 51.6 bits (122), Expect(3) = 2e-34
 Identities = 24/50 (48%), Positives = 29/50 (58%)
 Frame = -2

Query: 808 QAICLSFSGINIQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           Q IC       +   +RYLGLP+  GRSKK +F FV + V KKL  WK K
Sbjct: 822 QFICNMMGAKTVASQNRYLGLPVIFGRSKKVIFSFVKDRVWKKLKGWKEK 871



 Score = 48.9 bits (115), Expect(3) = 2e-34
 Identities = 26/93 (27%), Positives = 43/93 (46%)
 Frame = -2

Query: 355  FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
            F+S+ +P    +E       S+ WRS LS R   +   R+ +G+ + ++I    W+P   
Sbjct: 974  FKSRYYPNHSFIEASSGFQPSYAWRSILSAREHVQKGSRWIVGNGRKVRIWKDNWLPTLS 1033

Query: 175  NFRTSTPSPDSFDLFWASELLDSDGNSWNRPLV 77
            NF+  +P          S L+D D   W+  LV
Sbjct: 1034 NFKVCSPISFLDGEATVSALIDEDLRKWDLNLV 1066


>ref|XP_024172006.1| uncharacterized protein LOC112178017 [Rosa chinensis]
          Length = 1045

 Score =  104 bits (260), Expect(3) = 2e-34
 Identities = 49/111 (44%), Positives = 75/111 (67%)
 Frame = -3

Query: 666 KTSLSAGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKS 487
           KT  +AGK+VL+K+V+ ++P YV+SCF+L    C ++ +L A+ WW  +   + KIHW +
Sbjct: 398 KTLSTAGKEVLIKAVVQSIPTYVMSCFELPKHLCDEMHRLMARFWW-GEFGEERKIHWVA 456

Query: 486 WNKINVPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
           W+K+  PK   GLGF D+HLFN AL+ K   R++   + L+++  KARYFP
Sbjct: 457 WDKLCAPKKEGGLGFRDMHLFNTALLAKQGWRLICRLDSLLAQVFKARYFP 507



 Score = 54.3 bits (129), Expect(3) = 2e-34
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = -2

Query: 355 FESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSD 176
           F+++ FP    +   +   AS+ WRS +  R+  K  +RF++G+ + I I N PW+PL  
Sbjct: 501 FKARYFPNTDFMHAVLHKGASFSWRSIMKGRDLLKKGLRFQVGNGEDISIWNDPWVPLPY 560

Query: 175 NFRT-STPSPDSFDLFWASELLDSDGNSWNRPLVEIALEQAETLEHIMFSALEL 17
            F+  S P   + DL    +L+D +   W            E L H +F+ +E+
Sbjct: 561 RFKPFSIPMQGAEDL-RVVDLIDEETGDWQ-----------EWLLHELFTPMEV 602



 Score = 37.0 bits (84), Expect(3) = 2e-34
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 775 IQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           + K  +YLGLP  +  SK E F ++V+ V  +   W+NK
Sbjct: 360 VDKHDKYLGLPTELSYSKDEAFWYLVDRVRTRTQGWRNK 398


>gb|KYP76107.1| Putative ribonuclease H protein At1g65750 [Cajanus cajan]
          Length = 682

 Score = 85.9 bits (211), Expect(3) = 2e-34
 Identities = 39/106 (36%), Positives = 63/106 (59%)
 Frame = -3

Query: 651 AGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKIN 472
           AGK++ VKS+L   P Y +S F L       + ++    WW +   ++  I+W +WN ++
Sbjct: 108 AGKEIFVKSILQVFPTYTMSIFLLPHSVTDSLEKMVNTFWWSSNGSNKKGINWLNWNNLS 167

Query: 471 VPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
            P+ + GLGF ++  FN AL+ K +  I++NP  LV + LKA+YFP
Sbjct: 168 TPRKDGGLGFKNLDTFNMALLSKQVWCILTNPEALVIRLLKAKYFP 213



 Score = 60.8 bits (146), Expect(3) = 2e-34
 Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = -2

Query: 352 ESQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSDN 173
           +++ FP   +LE ++ HN S+ W+S+   ++   + +R++IG  KSI I N PWI  +  
Sbjct: 208 KAKYFPDKSILEANLGHNPSYTWKSFWKAKHFLNDGLRWKIGSGKSISIWNEPWILHNQT 267

Query: 172 F-RTSTPSPDSFDLFWASELLDSDGNSWNRPLVEIALEQAET 50
           + ++ + + D +     S+L+ SD   WN  ++    ++A T
Sbjct: 268 YIKSPSCTNDVYKHLHVSDLISSDTLEWNHNIIHHIFDEATT 309



 Score = 48.9 bits (115), Expect(3) = 2e-34
 Identities = 21/46 (45%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
 Frame = -2

Query: 781 INIQKTS---RYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNKFI 653
           + +Q+ S   +YLGLP FIGR+K+E F+FV + + K+++SW +K I
Sbjct: 60  LGVQENSTPDKYLGLPSFIGRNKREAFKFVKDRIWKRINSWSSKLI 105


>gb|PNY14301.1| ribonuclease H [Trifolium pratense]
          Length = 1196

 Score = 99.0 bits (245), Expect(3) = 3e-34
 Identities = 45/106 (42%), Positives = 69/106 (65%)
 Frame = -3

Query: 651 AGKKVLVKSVLDALPVYVLSCFKLHIGTCQQICQLAAKLWWCAKDFSQHKIHWKSWNKIN 472
           AGK+ L+K+V  A+P Y+LSC+K+ +G C+ I  + AK WW + D  + KIHW SW +++
Sbjct: 621 AGKETLIKAVAQAIPNYILSCYKMPLGCCKDIDAMLAKFWWGSND-DKRKIHWMSWKRLS 679

Query: 471 VPKMNEGLGFHDIHLFNEALICK*L*RIVSNPNLLVSKDLKARYFP 334
            PK   G+GF  +  FN+AL+ K   R+V     L+ K L++RY+P
Sbjct: 680 KPKNTGGMGFRGMEDFNKALLGKHCWRLVGGECSLLEKVLRSRYYP 725



 Score = 48.5 bits (114), Expect(3) = 3e-34
 Identities = 28/99 (28%), Positives = 48/99 (48%)
 Frame = -2

Query: 349  SQVFPYDGLLEVDI*HNASWLWRSWLSCRNTFKNEIRFEIGDDKSIQIRNSPWIPLSDNF 170
            S+ +P    +     +  S+ WRS +S R       R+ +G+ ++++I    W+   +  
Sbjct: 721  SRYYPKGDFMTASEGYQPSFAWRSIISAREVINLGERWCVGNGQNVRIWKDRWMVDRNLL 780

Query: 169  RTSTPSPDSFDLFWASELLDSDGNSWNRPLVEIALEQAE 53
            R+ TPS D  +    S L+D D   WNR LV    ++AE
Sbjct: 781  RSRTPSCDLDEDSKVSALIDHDTRQWNRTLVFNCFDEAE 819



 Score = 47.8 bits (112), Expect(3) = 3e-34
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -2

Query: 820 PSLQQAICLSFSGIN-IQKTSRYLGLPLFIGRSKKEVFQFVVESVLKKLDSWKNK 659
           PS+ +    +  G+  ++  SRYLG P+  GRSKK +F FV++ + KK+  WK +
Sbjct: 562 PSIDKNSICNMMGVKAVEAQSRYLGFPIPFGRSKKVIFSFVMDRIWKKVKGWKER 616