BLASTX nr result
ID: Rehmannia29_contig00031421
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00031421
(610 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)... 129 9e-31
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)... 128 2e-30
gb|AGC78957.1| hypothetical protein (mitochondrion) [Vicia faba] 100 9e-24
emb|CDM82313.1| unnamed protein product [Triticum aestivum] 95 2e-22
emb|CDM81530.1| unnamed protein product [Triticum aestivum] 92 5e-21
ref|YP_008992354.1| hypothetical protein Salmi_Mp138 (mitochondr... 80 6e-16
emb|CDM87129.1| unnamed protein product [Triticum aestivum] 72 2e-13
gb|OMO71560.1| hypothetical protein COLO4_28184 [Corchorus olito... 67 1e-10
gb|ESQ43400.1| hypothetical protein EUTSA_v10015949mg, partial [... 53 2e-09
gb|OMP02494.1| hypothetical protein CCACVL1_02786 [Corchorus cap... 60 5e-08
ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago... 52 5e-08
ref|YP_009382072.1| Nad4 (mitochondrion) [Utricularia reniformis... 60 3e-07
gb|PHU03937.1| hypothetical protein BC332_29188 [Capsicum chinense] 57 7e-06
gb|PKI40735.1| hypothetical protein CRG98_038873 [Punica granatum] 52 9e-06
>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 129 bits (323), Expect = 9e-31
Identities = 68/121 (56%), Positives = 70/121 (57%)
Frame = -1
Query: 364 CKPRIWYFGRASSP*TKKKWNPSPIYFMHFILYLAHSTQERLCYRGTHGWKQPLWFVLIS 185
C P WY G + K W AH TQERLC+ GT GWKQ LWF
Sbjct: 2873 CVPTTWYDGHS------KTWRMR-----------AHPTQERLCHMGTLGWKQSLWFSYPV 2915
Query: 184 GRNNKKKSPGWLVSLVIGDYLAWFGEHLLG*RFFCC*MLRPKC*TIDPTCLDGCLPQSVP 5
K SPGWLVSLVIGDYLAWFGEHLLG R C ML P C TI PTC DGC PQSVP
Sbjct: 2916 SIIRKNLSPGWLVSLVIGDYLAWFGEHLLGLRLVFCLMLWPLCSTIHPTCSDGCSPQSVP 2975
Query: 4 G 2
G
Sbjct: 2976 G 2976
>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
Length = 2992
Score = 128 bits (321), Expect = 2e-30
Identities = 68/121 (56%), Positives = 70/121 (57%)
Frame = -1
Query: 364 CKPRIWYFGRASSP*TKKKWNPSPIYFMHFILYLAHSTQERLCYRGTHGWKQPLWFVLIS 185
C P WY G + K W AH TQERLC+ GT GWKQ LWF
Sbjct: 2873 CVPTTWYDGHS------KTWRMR-----------AHPTQERLCHMGTLGWKQSLWFSYPV 2915
Query: 184 GRNNKKKSPGWLVSLVIGDYLAWFGEHLLG*RFFCC*MLRPKC*TIDPTCLDGCLPQSVP 5
K SPGWLVSLVIGDYLAWFGEHLLG R C ML P C TI PTC DGC PQSVP
Sbjct: 2916 TIIRKNLSPGWLVSLVIGDYLAWFGEHLLGLRLVFCLMLWPLCSTIHPTCSDGCSPQSVP 2975
Query: 4 G 2
G
Sbjct: 2976 G 2976
>gb|AGC78957.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 106
Score = 100 bits (248), Expect = 9e-24
Identities = 45/58 (77%), Positives = 48/58 (82%)
Frame = -1
Query: 268 YLAHSTQERLCYRGTHGWKQPLWFVLISGRNNKKKSPGWLVSLVIGDYLAWFGEHLLG 95
++ TQERLC GTHGWKQ VLISGRNN+ KSPGWLVSLVIGDYLAWFGEHLLG
Sbjct: 49 FMEWPTQERLCNMGTHGWKQSFLMVLISGRNNQNKSPGWLVSLVIGDYLAWFGEHLLG 106
>emb|CDM82313.1| unnamed protein product [Triticum aestivum]
Length = 64
Score = 95.1 bits (235), Expect = 2e-22
Identities = 44/62 (70%), Positives = 47/62 (75%)
Frame = -1
Query: 262 AHSTQERLCYRGTHGWKQPLWFVLISGRNNKKKSPGWLVSLVIGDYLAWFGEHLLG*RFF 83
AH TQERLC+ GT GWKQ LWF+ K +SPGWLVSLVIGDYLAWFGEHLLG RF
Sbjct: 3 AHPTQERLCHMGTLGWKQSLWFLYPVRIIRKNQSPGWLVSLVIGDYLAWFGEHLLGFRFV 62
Query: 82 CC 77
C
Sbjct: 63 FC 64
>emb|CDM81530.1| unnamed protein product [Triticum aestivum]
Length = 64
Score = 91.7 bits (226), Expect = 5e-21
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = -1
Query: 262 AHSTQERLCYRGTHGWKQPLWFVLISGRNNKKKSPGWLVSLVIGDYLAWFGEHLLG*RFF 83
AH TQERLC+ GT GWKQ LWF+ K +SP WLVSLVIGDYLAWFGEHLLG RF
Sbjct: 3 AHPTQERLCHMGTLGWKQSLWFLYPVRIIRKNQSPCWLVSLVIGDYLAWFGEHLLGFRFV 62
Query: 82 CC 77
C
Sbjct: 63 FC 64
>ref|YP_008992354.1| hypothetical protein Salmi_Mp138 (mitochondrion) [Salvia
miltiorrhiza]
gb|AGU16672.1| hypothetical protein Salmi_Mp138 (mitochondrion) [Salvia
miltiorrhiza]
Length = 111
Score = 80.1 bits (196), Expect = 6e-16
Identities = 41/70 (58%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = -1
Query: 358 PRIWYFGRASSP*TKKKWNPSPIYFMHFILYLAHSTQERLCYRGTHGWKQPLWFVLISGR 179
P WY G + K W +AHSTQERLCYRGTHGWKQPLWFVLISGR
Sbjct: 59 PTTWYDGHS------KTWR-----------MMAHSTQERLCYRGTHGWKQPLWFVLISGR 101
Query: 178 NNKKK-SPGW 152
NNKKK GW
Sbjct: 102 NNKKKVQVGW 111
>emb|CDM87129.1| unnamed protein product [Triticum aestivum]
Length = 52
Score = 71.6 bits (174), Expect = 2e-13
Identities = 34/51 (66%), Positives = 36/51 (70%)
Frame = -1
Query: 229 GTHGWKQPLWFVLISGRNNKKKSPGWLVSLVIGDYLAWFGEHLLG*RFFCC 77
GT GWKQ LWF+ K +SP WLVSLVIG YLAWFGEHLLG RF C
Sbjct: 2 GTLGWKQSLWFLYPVRIIRKNQSPCWLVSLVIGHYLAWFGEHLLGFRFVFC 52
>gb|OMO71560.1| hypothetical protein COLO4_28184 [Corchorus olitorius]
Length = 128
Score = 66.6 bits (161), Expect = 1e-10
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = -1
Query: 577 RGPPLNKFLKVRLLPASTEEVDFVPPGGHIDRNPER 470
R PPLN+ LKVRLLPASTEEV FVP GGHIDRNPER
Sbjct: 93 RAPPLNRLLKVRLLPASTEEVYFVPHGGHIDRNPER 128
>gb|ESQ43400.1| hypothetical protein EUTSA_v10015949mg, partial [Eutrema
salsugineum]
Length = 251
Score = 53.1 bits (126), Expect(2) = 2e-09
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = -1
Query: 223 HGWKQPLWFVLISGRNNKKKSPGWLVSLVIGDYLAWFGEHLL 98
+ W + + VLISGRNNK +SPG LVSLVIGDYLA LL
Sbjct: 179 NSWLETILMVLISGRNNKNQSPGRLVSLVIGDYLACLNAELL 220
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 63 LNAELLTLLVWMGVYPKVFRD 1
LNAELLTLLV MGV+PKVF D
Sbjct: 215 LNAELLTLLVRMGVHPKVFPD 235
>gb|OMP02494.1| hypothetical protein CCACVL1_02786 [Corchorus capsularis]
Length = 159
Score = 60.5 bits (145), Expect = 5e-08
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +1
Query: 394 LSVAPNESKPFEALVVVTVGRAFVLIAPDSDLYDLRVV 507
LSVAP ESKPFEA VVV VGRAFVLIAP DLYDLR +
Sbjct: 10 LSVAPLESKPFEAPVVVAVGRAFVLIAPGFDLYDLRAI 47
>ref|XP_013442821.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
gb|KEH16846.1| hypothetical protein MTR_0082s0050 [Medicago truncatula]
Length = 334
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1
Query: 166 KSPGWLVSLVIGDYLAWFGEHLL 98
+SPGWLVSLVIGDYLAWFGEHLL
Sbjct: 292 QSPGWLVSLVIGDYLAWFGEHLL 314
Score = 32.7 bits (73), Expect(2) = 5e-08
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -2
Query: 264 WPTPPKSAYVIGELM 220
WP+PPKSAYVI ELM
Sbjct: 276 WPSPPKSAYVIWELM 290
>ref|YP_009382072.1| Nad4 (mitochondrion) [Utricularia reniformis]
gb|ART31832.1| Nad4 (mitochondrion) [Utricularia reniformis]
Length = 499
Score = 60.5 bits (145), Expect = 3e-07
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -2
Query: 87 FFVAKCYGLNAELLTLLVWMGVYPKVFRD 1
FFVAKCYGLNAELLTLLVWMGV+PKVF D
Sbjct: 455 FFVAKCYGLNAELLTLLVWMGVHPKVFPD 483
>gb|PHU03937.1| hypothetical protein BC332_29188 [Capsicum chinense]
Length = 560
Score = 56.6 bits (135), Expect = 7e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1
Query: 265 LAHSTQERLCYRGTHGWKQPLWFVLIS 185
+AH TQERLC+RGTHGWKQ LWFVLIS
Sbjct: 198 MAHPTQERLCHRGTHGWKQSLWFVLIS 224
>gb|PKI40735.1| hypothetical protein CRG98_038873 [Punica granatum]
Length = 245
Score = 52.4 bits (124), Expect(2) = 9e-06
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1
Query: 166 KSPGWLVSLVIGDYLAWFGEHLL 98
+SPGWLVSLVIGDYLAWFGEHLL
Sbjct: 203 QSPGWLVSLVIGDYLAWFGEHLL 225
Score = 25.0 bits (53), Expect(2) = 9e-06
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2
Query: 264 WPTPPKSAY 238
WP+PPKSAY
Sbjct: 193 WPSPPKSAY 201