BLASTX nr result

ID: Rehmannia29_contig00031201 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00031201
         (829 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012854499.1| PREDICTED: conserved oligomeric Golgi comple...    62   3e-07
ref|XP_012854561.1| PREDICTED: conserved oligomeric Golgi comple...    62   3e-07
ref|XP_011083848.1| conserved oligomeric Golgi complex subunit 2...    61   7e-07
gb|PIN21969.1| Low density lipoprotein receptor [Handroanthus im...    60   2e-06
gb|KZV24845.1| Conserved oligomeric Golgi complex component [Dor...    59   3e-06
ref|XP_010250762.1| PREDICTED: conserved oligomeric Golgi comple...    59   6e-06
ref|XP_010927713.1| PREDICTED: conserved oligomeric Golgi comple...    58   8e-06
ref|XP_015866985.1| PREDICTED: conserved oligomeric Golgi comple...    58   8e-06
ref|XP_003608845.1| oligomeric subunit-like protein [Medicago tr...    58   1e-05

>ref|XP_012854499.1| PREDICTED: conserved oligomeric Golgi complex subunit 2-like
           [Erythranthe guttata]
 gb|EYU23122.1| hypothetical protein MIMGU_mgv1a024704mg [Erythranthe guttata]
          Length = 739

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 6/60 (10%)
 Frame = -2

Query: 366 FVD-IQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY-----TLEFILFPTTYAMS 205
           F+D ++GYCPSRSAV KL E+ VYI FMKQWNTG  FSL++      L+  L  TT   S
Sbjct: 370 FLDYLEGYCPSRSAVAKLREETVYIDFMKQWNTGVYFSLRFQEIAGALDSALMTTTLLRS 429


>ref|XP_012854561.1| PREDICTED: conserved oligomeric Golgi complex subunit 2-like
           [Erythranthe guttata]
 gb|EYU23123.1| hypothetical protein MIMGU_mgv1a001829mg [Erythranthe guttata]
          Length = 753

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 6/60 (10%)
 Frame = -2

Query: 366 FVD-IQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY-----TLEFILFPTTYAMS 205
           F+D ++GYCPSRSAV KL E+ VYI FMKQWNTG  FSL++      L+  L  TT   S
Sbjct: 384 FLDYLEGYCPSRSAVAKLREETVYIDFMKQWNTGVYFSLRFQEIAGALDSALMTTTLLRS 443


>ref|XP_011083848.1| conserved oligomeric Golgi complex subunit 2 [Sesamum indicum]
          Length = 757

 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -2

Query: 357 IQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY 247
           ++GYCPSRSAV K  ++AVYI+FMKQWNTG  FSL++
Sbjct: 388 LEGYCPSRSAVAKFRQEAVYIEFMKQWNTGVYFSLRF 424


>gb|PIN21969.1| Low density lipoprotein receptor [Handroanthus impetiginosus]
          Length = 756

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = -2

Query: 357 IQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY 247
           ++GYCPSRSAV KL E+AV ++FMKQWNTG  FSL++
Sbjct: 388 LEGYCPSRSAVAKLREEAVRVEFMKQWNTGVYFSLRF 424


>gb|KZV24845.1| Conserved oligomeric Golgi complex component [Dorcoceras
           hygrometricum]
          Length = 758

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = -2

Query: 357 IQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY 247
           ++GYCP+R AV+KL  +AVY++FMKQWNTG  FSL++
Sbjct: 389 LEGYCPTRPAVIKLRAEAVYVEFMKQWNTGVYFSLRF 425


>ref|XP_010250762.1| PREDICTED: conserved oligomeric Golgi complex subunit 2 [Nelumbo
           nucifera]
          Length = 747

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 25/43 (58%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = -2

Query: 372 ICFVD-IQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY 247
           + F+D ++GYCPSRSAVVK   + VY++FMKQWN G  FSL++
Sbjct: 372 LAFLDYLEGYCPSRSAVVKFRAEVVYVEFMKQWNIGVYFSLRF 414


>ref|XP_010927713.1| PREDICTED: conserved oligomeric Golgi complex subunit 2-like
           isoform X1 [Elaeis guineensis]
          Length = 751

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
 Frame = -2

Query: 357 IQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY-----TLEFILFPTTYAMSLPNL 193
           ++GYCPSRSAV K   +AVY+ FMKQWN G  FSL++      L+  L  TT   +  NL
Sbjct: 382 LEGYCPSRSAVAKFRSEAVYVDFMKQWNVGVYFSLRFQEIAGALDSALMVTTITPA-ENL 440

Query: 192 H 190
           H
Sbjct: 441 H 441


>ref|XP_015866985.1| PREDICTED: conserved oligomeric Golgi complex subunit 2 [Ziziphus
           jujuba]
          Length = 755

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -2

Query: 363 VDIQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY 247
           VD++GYCPSRSAV K   +AVY  FMKQWN G  FSL++
Sbjct: 384 VDLEGYCPSRSAVAKFRAEAVYNDFMKQWNLGVYFSLRF 422


>ref|XP_003608845.1| oligomeric subunit-like protein [Medicago truncatula]
 gb|AES91042.1| oligomeric subunit-like protein [Medicago truncatula]
          Length = 636

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -2

Query: 357 IQGYCPSRSAVVKLGEDAVYIKFMKQWNTGANFSLKY 247
           ++GYCPSRSAVVK   +A+Y +FMKQWN GA FS+++
Sbjct: 386 LEGYCPSRSAVVKFRSEAIYTEFMKQWNLGAYFSVRF 422


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