BLASTX nr result

ID: Rehmannia29_contig00030967 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00030967
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    41   2e-06

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = -3

Query: 197 ILTDIIGRVVSMQSAQTTQVGGKSTRFLDITLEDLE 90
           +L D+IG+VV+  S Q+ + GG+ TR LDI L+D E
Sbjct: 121 MLFDVIGQVVARDSPQSREFGGRETRLLDIVLQDYE 156



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 18/42 (42%), Positives = 30/42 (71%)
 Frame = -2

Query: 411 IIFHGKTHMFEMFDKSYPRLMYVFKDFRELYDFQRIDDTILF 286
           I F  KTH+ E+FD S+P +M+ FK F ++ + + I++T+LF
Sbjct: 83  INFITKTHVCEIFDDSFPSIMFDFKSFNDVKNAE-IEETMLF 123


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