BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00030956
         (2334 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX98065.1| ribonuclease H [Trifolium pratense]                    630   0.0  
ref|XP_024172006.1| uncharacterized protein LOC112178017 [Rosa c...   631   0.0  
gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]           622   0.0  
gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]           628   0.0  
gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinen...   628   0.0  
gb|PNX71213.1| ribonuclease H [Trifolium pratense]                    618   0.0  
gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]           622   0.0  
gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]           628   0.0  
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]           612   0.0  
gb|PNY15111.1| ribonuclease H [Trifolium pratense]                    625   0.0  
ref|XP_010682492.1| PREDICTED: uncharacterized protein LOC104897...   619   0.0  
ref|XP_021836344.1| uncharacterized protein LOC110776087 [Spinac...   620   0.0  
ref|XP_024195790.1| uncharacterized protein LOC112198938 [Rosa c...   613   0.0  
gb|PNX92808.1| ribonuclease H [Trifolium pratense]                    602   0.0  
ref|XP_010682933.1| PREDICTED: uncharacterized protein LOC104897...   613   0.0  
ref|XP_023905045.1| uncharacterized protein LOC112016795 [Quercu...   614   0.0  
gb|PNY03092.1| ribonuclease H [Trifolium pratense]                    599   0.0  
ref|XP_019106889.1| PREDICTED: uncharacterized protein LOC109135...   616   0.0  
gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]           600   0.0  
gb|PNX95041.1| ribonuclease H, partial [Trifolium pratense]           608   0.0  

>gb|PNX98065.1| ribonuclease H [Trifolium pratense]
          Length = 1011

 Score =  630 bits (1625), Expect = 0.0
 Identities = 321/775 (41%), Positives = 461/775 (59%), Gaps = 8/775 (1%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NR+K +LP++ISP QSAF+ GRLITDN ++A E FH +  +  +K G   +K DM+KAYD
Sbjct: 167  NRIKDMLPEVISPNQSAFIKGRLITDNTIIASEIFHYLAHS-KRKNGYVGIKTDMAKAYD 225

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+  +  MG   S V+ IM CV TV FSIL+NGHP Q F+P RGLRQGDPLSPY
Sbjct: 226  RVEWDFLEATLTSMGFPKSMVSTIMNCVRTVKFSILINGHPSQEFYPQRGLRQGDPLSPY 285

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +I KA+   LIHGV +C  AP I+HLFFADDS++F RAN  E+  I NI
Sbjct: 286  LFIICADVLSGLITKAQQDKLIHGVMICHEAPEISHLFFADDSLVFCRANTKEVSTIQNI 345

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I+ Y+ ASGQ +N SKS + FSKGV    +  +   + +  + + + YLG+P  +GRSKK
Sbjct: 346  IQIYQNASGQLVNFSKSEMVFSKGVSNQIQRDISNILPMKILNQFSKYLGMPVALGRSKK 405

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            +IF  I +++ KKLK WK   LS AG+  LIK++AQAIP+Y+MS+FLLP+  C +L  +I
Sbjct: 406  QIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKAVAQAIPTYLMSSFLLPKGVCDQLEKMI 465

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
             NFWWG   + R+ HW  W+ +CK K EGG+GFR+++ FNEA+LAKQGWRLI   +SL+A
Sbjct: 466  CNFWWGSSTDHRKIHWIKWSTVCKHKMEGGIGFRDLRAFNEALLAKQGWRLITQPDSLVA 525

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            K LKA+Y+P   FL+A+     S+TW+SIL    ++ RG  W IG G+ + IW D W+Q 
Sbjct: 526  KILKAKYYPKGEFLKASHKQQMSYTWKSILQASWVIKRGSYWTIGSGQGINIWEDNWIQQ 585

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            +       + P     ++V ELM +N   WN  ++ ++F   +   IQ IP+    + D 
Sbjct: 586  KGNPTSTISKPNNCGLIKVKELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDI 645

Query: 1443 LVWNFSKDGVYKVRSGYH-IAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWR 1619
            L W+ ++DG Y V+SGY  I +  KN   N  TSS      W+ +WKL++PPK + F+WR
Sbjct: 646  LTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNATSSNSSMEIWKVLWKLNVPPKHSHFIWR 705

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQE 1799
            C+   +P K  L K+GI+ DPLC RC   +ET +H   EC WA   W A P        +
Sbjct: 706  CLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETIQHVFLECDWAKKVWFASPLTLNLNSNQ 765

Query: 1800 LNGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEE 1979
            L     DW   M    + +  E    + +  W+ RN     +K+L  Q   + A +RL E
Sbjct: 766  LT-EFYDWFNYMIINTDKECMEKIVAITYEIWNTRNLLVFQNKDLPPQEISANALKRLHE 824

Query: 1980 HKQGKKVQPRTDVKE-------RDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNG 2138
             K  +  + RT +++        +  W+ P     K N DA +        G V+R  +G
Sbjct: 825  FKSFE--EQRTPIQKPSHKSCRNNTSWSPPLRGCLKANVDAHLSSDGRWLSGLVLRREDG 882

Query: 2139 QIITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSK 2303
              + + +R+++   E  + EA+A  + +         ++VLE D+ TI   ++ +
Sbjct: 883  SAVGSATRMHKGSGEAVLGEALALNDAMEWVAKFINHQVVLETDSQTIVKAIKGR 937


>ref|XP_024172006.1| uncharacterized protein LOC112178017 [Rosa chinensis]
          Length = 1045

 Score =  631 bits (1627), Expect = 0.0
 Identities = 339/785 (43%), Positives = 474/785 (60%), Gaps = 8/785 (1%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLK LL D+IS  QSAFVPGRLI+DN+LLAFE  H +KR      G  ALKLDMSKAYD
Sbjct: 139  NRLKPLLDDIISQQQSAFVPGRLISDNSLLAFEISHCLKRRRRGNVGFCALKLDMSKAYD 198

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+ V+ K+G   +++   M CVSTVS+S L+NG P     P+RGLRQGD +SPY
Sbjct: 199  RVEWDFLEAVLDKLGFGATWIRWTMACVSTVSYSFLVNGDPCGNISPSRGLRQGDAISPY 258

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LFL CAE  S MI++AE   L+HGVKVC++APAI+HLFFADDS IF +A  T++ C+ +I
Sbjct: 259  LFLLCAEVLSRMIKEAERNDLMHGVKVCQQAPAISHLFFADDSFIFSKAEITDILCMRDI 318

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
             + YE  SGQ+IN  KS ISFSK V +  +  L   +GV  V+KH  YLGLPT +  SK 
Sbjct: 319  FQKYEHMSGQQINYEKSCISFSKNVPRWKQDDLARVLGVTRVDKHDKYLGLPTELSYSKD 378

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            E F  ++DRV+ + + W+  TLS AGK +LIK++ Q+IP+Y+MS F LP+  C +++ ++
Sbjct: 379  EAFWYLVDRVRTRTQGWRNKTLSTAGKEVLIKAVVQSIPTYVMSCFELPKHLCDEMHRLM 438

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            + FWWG+  EER+ HW +W++LC PKKEGGLGFR++  FN A+LAKQGWRLI   +SLLA
Sbjct: 439  ARFWWGEFGEERKIHWVAWDKLCAPKKEGGLGFRDMHLFNTALLAKQGWRLICRLDSLLA 498

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            +  KARYFPN  F+ A +    S +WRSI+ GRD+L +GLR+ +G+G+ + IW+DPW+  
Sbjct: 499  QVFKARYFPNTDFMHAVLHKGASFSWRSIMKGRDLLKKGLRFQVGNGEDISIWNDPWVPL 558

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
               FK  +     ++++RV +L+ E    W   +L ELF   ++ +I  IPL ++   DR
Sbjct: 559  PYRFKPFSIPMQGAEDLRVVDLIDEETGDWQEWLLHELFTPMEVVNIMKIPLSLSGGIDR 618

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSS-GLDKG-TWEWMWKLDIPPKITLFLW 1616
            LVW+F K G Y V++GYH+A+      +    SS G D+   W  +WK+++PPK+ +  W
Sbjct: 619  LVWHFDKKGRYSVKNGYHVARVMDTLERTASGSSFGADRARLWGKLWKVNVPPKVRMHAW 678

Query: 1617 RCIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQ 1796
            R +KG LPT+ AL KR    D  C  C   +E + H  + C     FW       +  P 
Sbjct: 679  RLVKGTLPTRAALAKRVQLSDVRCVYCSNGVEDSLHLFKNCDALRTFWMHSSLELQ--PG 736

Query: 1797 ELNGNIAD-WITTMSKTGELKAQELFATLLWTAWHARN----EATHNHKELDHQWCFSFA 1961
            +    + D W   M      +  E F   LW  W  RN    +A+ ++    H W  SF 
Sbjct: 737  KHPSIVLDVWFWDMVDALNGEKLEYFLMALWVVWMERNNIVWKASVSNPTNMHAWAKSFL 796

Query: 1962 ERRLEEHKQGKKVQPRTDVKERDAVWTKPNSDHFKLNTDASIVPGT-GTGIGAVIRDSNG 2138
                + HK+      R+ +K     WT P     K+N D S    T G G+G V+R+  G
Sbjct: 797  HEYKQLHKRQGGKAKRSLIK-----WTCPPRGRLKINIDGSFCTETGGGGVGVVVRNFEG 851

Query: 2139 QIITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKSMDFS 2318
              I T +R +         EA A R G+ +A     K++++E D + + + LR+   DFS
Sbjct: 852  TCIATFARPFHFAQSDIHMEAEALRAGLLIAIQQDWKEIIVESDCVNLVSALRATDDDFS 911

Query: 2319 YAGNV 2333
              G +
Sbjct: 912  SIGRI 916


>gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]
          Length = 916

 Score =  622 bits (1603), Expect = 0.0
 Identities = 315/748 (42%), Positives = 449/748 (60%), Gaps = 8/748 (1%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NR+K +LP++ISP QSAF+ GRLITDN ++A E FH +  +  +K G   +K DM+KAYD
Sbjct: 167  NRIKDMLPEVISPNQSAFIKGRLITDNTIIASEIFHYLAHS-KRKNGYVGIKTDMAKAYD 225

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+  +  MG   S V+ IM CV TV FSIL+NGHP Q F+P RGLRQGDPLSPY
Sbjct: 226  RVEWDFLEATLTSMGFPKSMVSTIMNCVRTVKFSILINGHPSQEFYPQRGLRQGDPLSPY 285

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +I KA+   LIHGV +C  AP I+HLFFADDS++F RAN  E+  I NI
Sbjct: 286  LFIICADVLSGLITKAQQDKLIHGVMICHEAPEISHLFFADDSLVFCRANTKEVSTIQNI 345

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I+ Y+ ASGQ +N SKS + FSKGV    +  +   + +  + + + YLG+P  +GRSKK
Sbjct: 346  IQIYQNASGQLVNFSKSEMVFSKGVSNQIQRDISNILPMKILNQFSKYLGMPVALGRSKK 405

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            +IF  I +++ KKLK WK   LS AG+  LIK++AQAIP+Y+MS+FLLP+  C +L  +I
Sbjct: 406  QIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKAVAQAIPTYLMSSFLLPKGVCDQLEKMI 465

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
             NFWWG   + R+ HW  W+ +CK K EGG+GFR+++ FNEA+LAKQGWRLI   +SL+A
Sbjct: 466  CNFWWGSSTDHRKIHWIKWSTVCKHKMEGGIGFRDLRAFNEALLAKQGWRLITQPDSLVA 525

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            K LKA+Y+P   FL+A+     S+TW+SIL    ++ RG  W IG G+ + IW D W+Q 
Sbjct: 526  KILKAKYYPKGEFLKASHKQQMSYTWKSILQASWVIKRGSYWTIGSGQGINIWEDNWIQQ 585

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            +       + P     ++V ELM +N   WN  ++ ++F   +   IQ IP+    + D 
Sbjct: 586  KGNPTSTISKPNNCGLIKVKELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDI 645

Query: 1443 LVWNFSKDGVYKVRSGYH-IAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWR 1619
            L W+ ++DG Y V+SGY  I +  KN   N  TSS      W+ +WKL++PPK + F+WR
Sbjct: 646  LTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNATSSNSSMEIWKVLWKLNVPPKHSHFIWR 705

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQE 1799
            C+   +P K  L K+GI+ DPLC RC   +ET +H   EC WA   W A P        +
Sbjct: 706  CLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETIQHVFLECDWAKKVWFASPLTLNLNSNQ 765

Query: 1800 LNGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEE 1979
            L     DW   M    + +  E    + +  W+ RN     +K+L  Q   + A +RL E
Sbjct: 766  LT-EFYDWFNYMIINTDKECMEKIVAITYEIWNTRNLLVFQNKDLPPQEISANALKRLHE 824

Query: 1980 HKQGKKVQPRTDVKE-------RDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNG 2138
             K  +  + RT +++        +  W+ P     K N DA +        G V+R  +G
Sbjct: 825  FKSFE--EQRTPIQKPSHKSCRNNTSWSPPLRGCLKANVDAHLSSDGRWLSGLVLRREDG 882

Query: 2139 QIITTLSRLYEDEMEIEVAEAIACREGV 2222
              + + +R+++   E  + EA+A  + +
Sbjct: 883  SAVGSATRMHKGSGEAVLGEALALNDAM 910


>gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1188

 Score =  628 bits (1619), Expect = 0.0
 Identities = 319/783 (40%), Positives = 466/783 (59%), Gaps = 6/783 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NR+K++LP++ISP QSAF+ GRLITDN L+A E FH + +   +K G   +K DM+KAYD
Sbjct: 346  NRIKTILPEVISPNQSAFIQGRLITDNTLIASEIFHYLAQT-KRKTGYVGIKTDMAKAYD 404

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+  M+ MG   + V  IMKCV+TV FSIL+NG+P Q F+P RGLRQGDPLSPY
Sbjct: 405  RVEWDFLEATMVTMGFPATMVQTIMKCVTTVKFSILINGYPSQEFYPQRGLRQGDPLSPY 464

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +I +A+   LIHG+++ + AP I+HLFFADDS++F RA   E+  I +I
Sbjct: 465  LFIICADVLSGLISRAQQEKLIHGIRISQGAPEISHLFFADDSLMFCRATNKEVSTIQDI 524

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I++Y+ ASGQ +N++KS + FSKGV  G +  +   + +   E  + YLG+P V GRSK+
Sbjct: 525  IQTYQKASGQLVNLTKSEMVFSKGVTNGIKEEISRILPMQISEYFSKYLGMPIVHGRSKQ 584

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            +IF  I +++ KKLK WK   LS AG+  LIK++AQAIP+Y+MS FL+P+  C++L  +I
Sbjct: 585  QIFNYIREKIWKKLKGWKEKNLSFAGRGTLIKAVAQAIPTYLMSCFLIPKGVCEQLEKMI 644

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
             NFWWG   ++R+ HW  W+++C  K+ GGLGFR+++ FNEA+LAKQGWRLI    SL+A
Sbjct: 645  CNFWWGSTTDQRKMHWLKWSKVCNQKRNGGLGFRDLRAFNEALLAKQGWRLITKPTSLVA 704

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            + LKA+YFPN+SFL A      S+TWRSI+    ++ RG  W+IGDG+ + IW D W+Q 
Sbjct: 705  QVLKAKYFPNESFLNAKHKQVMSYTWRSIMQASWVIKRGSYWSIGDGEDINIWEDNWMQQ 764

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            +         P   + ++V ELM  N   WN  ++ ++F   + + I  IP+    +PD 
Sbjct: 765  KSATYKGRPKPNNLNLIKVKELMDSNYNEWNTDIINQVFLPYEAQMILNIPIIDKTQPDM 824

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWRC 1622
            L W+ ++DG Y V+SGYH      N     P+++   +  W  +WKL +PPK +  LWR 
Sbjct: 825  LTWDCTQDGQYSVKSGYHAIMEWGNLPNASPSNN--SQHIWNVLWKLKVPPKHSHLLWRV 882

Query: 1623 IKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQEL 1802
            +   LP KN L KRG++ DPLC RC  ++ET  H   +C WA   W A          +L
Sbjct: 883  LHNALPVKNNLFKRGVRCDPLCPRCSNSMETIHHVFLDCEWAKQTWFASALTLNLGQNQL 942

Query: 1803 NGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEEH 1982
              +  DWI  M      +  E    +++  W+ARN      K L  Q   S A  +L+E+
Sbjct: 943  T-DFYDWINYMINNTNKECIEKITAIMYGIWYARNVLVFQGKNLPPQEISSTALNQLQEY 1001

Query: 1983 KQGKKVQPRTDVKER------DAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQI 2144
            +     Q   D + R      D  W+ P     K+N DA +        G V+R S+G  
Sbjct: 1002 QTHGLEQHIQDPQVRRNGCSNDISWSPPPRGTLKINVDAHLSSDGHWSTGLVLRRSDGST 1061

Query: 2145 ITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKSMDFSYA 2324
            +   +R +    ++   EA+   + +     LG + ++ E+D+  I   ++ +S  F   
Sbjct: 1062 VGVATRTHNGSADVVTGEAMGLMDAIEWIEKLGEQSVIFEMDSQVIVKAVKGQSNIFKSW 1121

Query: 2325 GNV 2333
            G V
Sbjct: 1122 GKV 1124


>gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1228

 Score =  628 bits (1620), Expect = 0.0
 Identities = 329/781 (42%), Positives = 462/781 (59%), Gaps = 4/781 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLK LL DLISPYQSAFVPGRLI+DN+L AFE  H +KR      G  ALKLDMSKAYD
Sbjct: 374  NRLKPLLQDLISPYQSAFVPGRLISDNSLAAFEISHFLKRRRRGHVGYGALKLDMSKAYD 433

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW FL  VM ++G C  +   +M+CV+TVS+S ++NG P     P+RGLRQGD +SPY
Sbjct: 434  RVEWGFLDRVMQQLGFCPKWRGWVMRCVTTVSYSFIVNGTPRGRVVPSRGLRQGDSISPY 493

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LFL CAE  S +I KAE MG IHGV++C  AP I+HLFFADDS IF +A   E + +  +
Sbjct: 494  LFLICAETLSRLILKAEDMGSIHGVRICTGAPPISHLFFADDSFIFFKAETDECDVLKRM 553

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
             + YE ASGQ IN  KS +SFSK V +  +  L   + V  V+KH  YLGLPT I  SK 
Sbjct: 554  FEQYEKASGQMINFDKSCVSFSKNVKRAKQDELAASLRVLRVDKHDKYLGLPTEISYSKS 613

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            E F  + ++V+K+ + W+  TLS AGK I+IK++AQ+IP+Y+MS F LP+  C +++ ++
Sbjct: 614  EAFNFLSEKVRKRTQGWRAKTLSAAGKEIMIKAVAQSIPTYVMSCFELPKHLCLEMHRLM 673

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            + FWWG K  +++ HW +W +LC PK EGGLGFR +  FN+A+LAKQGWR+I + NSLLA
Sbjct: 674  AQFWWGDKSNDKKIHWLAWEKLCVPKAEGGLGFRNMVQFNQALLAKQGWRIIQNPNSLLA 733

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            +  KA+YFPN  F++A      S+ W+SIL GR++L +GLR  +G+G  + +W D WL  
Sbjct: 734  RLYKAKYFPNCDFMKAEASSGSSYAWKSILFGRELLRKGLRLQVGNGSQIAVWTDQWLPL 793

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
               F+ ++      + +RV EL+ +    W+  +L+ELF   ++  I +IPL + +  DR
Sbjct: 794  PHSFRPISTPKEGLETLRVDELIDQEENEWHMFLLQELFMPLEVNLIASIPLSLRRPVDR 853

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSS---GLDKGTWEWMWKLDIPPKITLFL 1613
             VW+  K G+Y V+SGYHIA+      +    S+   GL+   W+ +W   IPPK+ +F+
Sbjct: 854  WVWHHDKKGMYDVKSGYHIARIVDGATERASCSTGPVGLNGKYWKLVWHARIPPKVRMFI 913

Query: 1614 WRCIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTP 1793
            WR +KGILPTK+ L K+    D  C  C  A E   H  R+C +   FWA G    +   
Sbjct: 914  WRLLKGILPTKHELCKKVALPDFECVFCHGAGEHGLHLFRDCSYIACFWALGELDLKVV- 972

Query: 1794 QELNGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRL 1973
              +  ++ +W+  +        + LF   LW  W  RN    N    +      +A + L
Sbjct: 973  DVMAASLEEWVKNVIDVITEHHRNLFFVYLWVIWSERNNLVWNGSVFNAYNAAQWASKFL 1032

Query: 1974 EEHKQGKKVQPRTDVKERDAVWTKPNSDHFKLNTDASIVPGTGT-GIGAVIRDSNGQIIT 2150
             E++Q    + +   + R A W  P +   K+N D S  P +G  GIG VIRD  G  + 
Sbjct: 1033 GEYQQVHPTRQKKSGRTR-AKWENPPTGRLKINIDGSYRPESGDGGIGVVIRDDKGSCMA 1091

Query: 2151 TLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKSMDFSYAGN 2330
             ++R + + +     EA ACR G+ LA      + +LE D   +   L     D S  G 
Sbjct: 1092 AMARYFPNVLSAFHMEAEACRAGLLLAIYQEWDEFILESDCSLMVAALNQNLEDRSEVGR 1151

Query: 2331 V 2333
            +
Sbjct: 1152 I 1152


>gb|PNX71213.1| ribonuclease H [Trifolium pratense]
          Length = 951

 Score =  618 bits (1593), Expect = 0.0
 Identities = 322/784 (41%), Positives = 458/784 (58%), Gaps = 7/784 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLK +LP++IS  QSAFV  RLITDN L+AFE F+  K    +K+G   +K DM+KAYD
Sbjct: 104  NRLKPILPNIISHNQSAFVQDRLITDNTLVAFEIFNYFKHT-NRKKGFVGIKTDMAKAYD 162

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEWNFL+  +  MG      N I++CV+TV FSIL+NG+P   F P RGLRQGDPLSP+
Sbjct: 163  RVEWNFLRATLEAMGFPQHLTNTILQCVTTVQFSILINGNPSTPFRPQRGLRQGDPLSPF 222

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +I +A+   LIHGVKV   AP ITHL FADDS+ F RA + E   + NI
Sbjct: 223  LFIICADVLSGLITQAKNKQLIHGVKVANGAPEITHLLFADDSLFFCRATKQEATNVRNI 282

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I  Y+ ASGQ +NM KS I FSK V    +  +   + +  V+  + YLG+PT IGRSK+
Sbjct: 283  ILDYQRASGQLVNMQKSEIIFSKMVPNEVKVEVNHILPMTRVDHFSKYLGMPTDIGRSKQ 342

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            +IF  I DRV KKLK WK   LS AG+  L+K++ QAIP+YIMS FLLP+  CK++ S+ 
Sbjct: 343  QIFNYIKDRVWKKLKGWKEKNLSYAGRGTLLKAVIQAIPTYIMSCFLLPKGLCKQIESMT 402

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            SNFWWG   ++++ HW +W ++CK K +GG GFR    FNEA+LAKQGWR+    +SL+A
Sbjct: 403  SNFWWGSNTDKKKLHWINWKKMCKNKTQGGYGFRNTCMFNEALLAKQGWRIATQPDSLVA 462

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            K  KA+YFP   F+EA  G   S+TWRSIL  R IL +G  W IG+G+SV IW D WL  
Sbjct: 463  KVYKAKYFPKCQFMEAKNGNMLSYTWRSILHARWILQKGCFWTIGNGESVNIWKDSWLPK 522

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            Q GFK+ +   G +    V +L+      WN  ++ ++F   +   I  +PL      D 
Sbjct: 523  QNGFKVWSTQQGYTRYNLVKDLINPATNQWNQNLIHQIFLPFEANQILQLPLVEPNSKDE 582

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKG-TWEWMWKLDIPPKITLFLWR 1619
            LVW+ +KDG+Y V+SGYH A    +   N  +S+ +    TW+ +WKL IPPK    +WR
Sbjct: 583  LVWSGTKDGLYTVKSGYHAAMEWNHLRHNQVSSNAIATDLTWQNLWKLKIPPKHATLIWR 642

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQE 1799
             +   LP +++L  +GIQ +P C RC  ++ET +H   +C WA   W   P    F   +
Sbjct: 643  ILNHSLPVRSSLSSKGIQCNPTCPRCNTSLETIDHVFMQCEWAKVVWFGSPMTIHFNTTD 702

Query: 1800 LNGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELD-----HQWCFSFAE 1964
             + + ++W++TM KT   +     A L +  W ARN      K +       Q   S  E
Sbjct: 703  RHQSFSEWLSTMLKTKNQECMAPIAALTYHIWRARNLLVFQDKNVPVMCVVQQAISSSIE 762

Query: 1965 RRLEEHKQGKKV-QPRTDVKERDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQ 2141
             +   H     +    T  +  +  WT P  +  KLN DA        G+G V+R   G+
Sbjct: 763  YQTLGHPHRLPMCAAATQPRGNNTNWTPPPRNSLKLNVDAHPCGDGRWGLGMVLRTEEGK 822

Query: 2142 IITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKSMDFSY 2321
             +   + +     +I   EA+     +  A++LG  ++++E+D+ +I + ++ ++ +  Y
Sbjct: 823  CVGAKTVVVSGLSDILDGEALGLNVAIDFAQSLGNTQVIIELDSTSIVDAVKQRNFNHFY 882

Query: 2322 AGNV 2333
            +G +
Sbjct: 883  SGRI 886


>gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1070

 Score =  622 bits (1603), Expect = 0.0
 Identities = 315/748 (42%), Positives = 449/748 (60%), Gaps = 8/748 (1%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NR+K +LP++ISP QSAF+ GRLITDN ++A E FH +  +  +K G   +K DM+KAYD
Sbjct: 321  NRIKDMLPEVISPNQSAFIKGRLITDNTIIASEIFHYLAHS-KRKNGYVGIKTDMAKAYD 379

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+  +  MG   S V+ IM CV TV FSIL+NGHP Q F+P RGLRQGDPLSPY
Sbjct: 380  RVEWDFLEATLTSMGFPKSMVSTIMNCVRTVKFSILINGHPSQEFYPQRGLRQGDPLSPY 439

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +I KA+   LIHGV +C  AP I+HLFFADDS++F RAN  E+  I NI
Sbjct: 440  LFIICADVLSGLITKAQQDKLIHGVMICHEAPEISHLFFADDSLVFCRANTKEVSTIQNI 499

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I+ Y+ ASGQ +N SKS + FSKGV    +  +   + +  + + + YLG+P  +GRSKK
Sbjct: 500  IQIYQNASGQLVNFSKSEMVFSKGVSNQIQRDISNILPMKILNQFSKYLGMPVALGRSKK 559

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            +IF  I +++ KKLK WK   LS AG+  LIK++AQAIP+Y+MS+FLLP+  C +L  +I
Sbjct: 560  QIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKAVAQAIPTYLMSSFLLPKGVCDQLEKMI 619

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
             NFWWG   + R+ HW  W+ +CK K EGG+GFR+++ FNEA+LAKQGWRLI   +SL+A
Sbjct: 620  CNFWWGSSTDHRKIHWIKWSTVCKHKMEGGIGFRDLRAFNEALLAKQGWRLITQPDSLVA 679

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            K LKA+Y+P   FL+A+     S+TW+SIL    ++ RG  W IG G+ + IW D W+Q 
Sbjct: 680  KILKAKYYPKGEFLKASHKQQMSYTWKSILQASWVIKRGSYWTIGSGQGINIWEDNWIQQ 739

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            +       + P     ++V ELM +N   WN  ++ ++F   +   IQ IP+    + D 
Sbjct: 740  KGNPTSTISKPNNCGLIKVKELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDI 799

Query: 1443 LVWNFSKDGVYKVRSGYH-IAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWR 1619
            L W+ ++DG Y V+SGY  I +  KN   N  TSS      W+ +WKL++PPK + F+WR
Sbjct: 800  LTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNATSSNSSMEIWKVLWKLNVPPKHSHFIWR 859

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQE 1799
            C+   +P K  L K+GI+ DPLC RC   +ET +H   EC WA   W A P        +
Sbjct: 860  CLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETIQHVFLECDWAKKVWFASPLTLNLNSNQ 919

Query: 1800 LNGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEE 1979
            L     DW   M    + +  E    + +  W+ RN     +K+L  Q   + A +RL E
Sbjct: 920  LT-EFYDWFNYMIINTDKECMEKIVAITYEIWNTRNLLVFQNKDLPPQEISANALKRLHE 978

Query: 1980 HKQGKKVQPRTDVKE-------RDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNG 2138
             K  +  + RT +++        +  W+ P     K N DA +        G V+R  +G
Sbjct: 979  FKSFE--EQRTPIQKPSHKSCRNNTSWSPPLRGCLKANVDAHLSSDGRWLSGLVLRREDG 1036

Query: 2139 QIITTLSRLYEDEMEIEVAEAIACREGV 2222
              + + +R+++   E  + EA+A  + +
Sbjct: 1037 SAVGSATRMHKGSGEAVLGEALALNDAM 1064


>gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1376

 Score =  628 bits (1619), Expect = 0.0
 Identities = 314/773 (40%), Positives = 456/773 (58%), Gaps = 6/773 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLKS+LPD+ISP QSAF+ GRLITDN L+A E FH + +   +K G   +K DM+KAYD
Sbjct: 531  NRLKSILPDIISPNQSAFIKGRLITDNTLIASEVFHYLAQT-NRKSGYVGIKTDMAKAYD 589

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+  +  MG   S V+ IMKCV+TV FSI++NG+P + F+P RGLRQGDPLSPY
Sbjct: 590  RVEWDFLRTTLTTMGFPTSLVHTIMKCVTTVKFSIIINGYPSRQFYPQRGLRQGDPLSPY 649

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +I KA+   LIHG+K+ + AP ++HLFFADDS+IF RAN+ E+  I NI
Sbjct: 650  LFIICADVLSGLISKAQQENLIHGIKISQGAPEVSHLFFADDSLIFCRANKKEVSTINNI 709

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I+ Y+ ASGQ +N++KS + FSKGV    +  +   + +   E  + YLG+P V GRSKK
Sbjct: 710  IQVYQNASGQLVNLAKSEMVFSKGVTTETKKDVTTILPMKTPEHFSKYLGMPIVYGRSKK 769

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            +IF  I +++ +KLK WK   LS AG+  LIK++AQAIP+Y+MS FL+P+  C +L  +I
Sbjct: 770  QIFNHIKEKIWQKLKGWKEKNLSFAGRSTLIKAVAQAIPTYLMSCFLIPKGICDQLEKMI 829

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
             NFWWG   + R+ HW  W+ +C  K  GGLGFR+++ FNEA+LAKQ WRLI +  SL+A
Sbjct: 830  CNFWWGSTTDHRKMHWVKWSNICTQKNNGGLGFRDLRAFNEALLAKQSWRLITNPTSLVA 889

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            + LKA+Y+P +  L A    N S+TWRSI+    I+ RG  W IG G++  IW D W+Q 
Sbjct: 890  QVLKAKYYPKEDLLHAKYSKNMSYTWRSIIQTNWIIKRGSYWTIGSGQNTNIWEDNWIQQ 949

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
                      P   +  +V ELM  N   W   ++ ++F   + + I  IP+    +PD 
Sbjct: 950  ASSTYKCNPKPNNLNLTKVQELMDTNNNAWKEDIINQIFQPYEAQMILKIPIMDKAQPDT 1009

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWRC 1622
            L W+ ++DG+Y V+SGYH      + +    T+S   +  W+ +WKL++PPK T  LWR 
Sbjct: 1010 LTWDNTQDGIYSVKSGYHSIMEWSHTLN--ATTSNNSQDLWKAIWKLNVPPKHTHLLWRV 1067

Query: 1623 IKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQEL 1802
            +K  LP KN L KRG++ DPLC RC   +ET  H   +C W    W A          ++
Sbjct: 1068 LKNALPVKNNLFKRGVRCDPLCPRCTNCLETTNHVFLDCEWTKQVWFASSLNLNLGQNQI 1127

Query: 1803 NGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEEH 1982
              ++ DWI  M      +  E    +++  W+ARN      K L  Q   S A ++L+E+
Sbjct: 1128 T-DVYDWIRYMINNTNKECIEQITAIIYGIWYARNMLVFQEKLLPPQEISSIATKQLQEY 1186

Query: 1983 ------KQGKKVQPRTDVKERDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQI 2144
                  ++  + Q RT     D  W+ P     K+N DA +        G V+R  +G  
Sbjct: 1187 QLHGFEQEIHEPQVRTKSCSNDISWSPPLRGTLKINVDAHLSSDGHWSTGLVLRRVDGST 1246

Query: 2145 ITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSK 2303
            +   +R ++  M+    EA    + +     +G + ++ E+D+  + N +R +
Sbjct: 1247 VGVATRTHDGAMDTVTGEARGLLDAIEWIEKMGERNVIFELDSQVVVNAVRKQ 1299


>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
          Length = 894

 Score =  612 bits (1578), Expect = 0.0
 Identities = 307/738 (41%), Positives = 442/738 (59%), Gaps = 1/738 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NR+K +LP+++   QSAFV GRLITDNAL+A E FH MK+    K+G  ALKLDM+KAYD
Sbjct: 119  NRMKCILPEVVDEEQSAFVKGRLITDNALIAMECFHWMKKKTKGKKGMMALKLDMAKAYD 178

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            R+EW F+++ +   G   + +NLIM C+STVS+ +L+NG P + F P RG+RQGDPLSPY
Sbjct: 179  RMEWPFIRSTLQATGFPPTMINLIMNCISTVSYQLLVNGQPSRSFKPERGIRQGDPLSPY 238

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            +F+ CA   S M+ K      IHG++V R AP ITHL FADDS++F RAN+ E E I NI
Sbjct: 239  VFILCANVLSGMLHKGARNNKIHGLQVARNAPKITHLLFADDSLLFARANQKEAEVIINI 298

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            +++Y+ ASGQ +++ KS +SFS+ +    +  +  KI V  V  H+ YLGLP + GRSKK
Sbjct: 299  LQTYQTASGQLVSLEKSEVSFSRNLPTIEKNMICNKIDVKAVTNHSKYLGLPVIFGRSKK 358

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            EIF ++ +R+ KK+K WK   LS AGK  LIKS+AQAIP+YIMS + LP   C  + +++
Sbjct: 359  EIFASVQERIWKKIKGWKEKCLSRAGKETLIKSVAQAIPNYIMSCYKLPTGCCDNIEAML 418

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            + FWWG  +++R+ HW SWN+L K K +GGLGFR  + FN+A+L KQ WRL+ + +SLLA
Sbjct: 419  AKFWWGTTEKQRKIHWVSWNKLGKAKSKGGLGFRSFEDFNKALLGKQCWRLLQNPDSLLA 478

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            K  K+RYFP   F++A +GY PS+ WRS+   R+++  G RW IG+GK V IW+D WL  
Sbjct: 479  KVFKSRYFPRSKFMDANVGYQPSYAWRSLCNSREVIDVGARWLIGNGKDVHIWNDKWLPA 538

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            Q  FK+ +     + N  V++L+     +W+  +++  F   + + I  IPL      D+
Sbjct: 539  QDKFKVWSPVSNLAPNAMVSDLINLETKMWDKNLVQNCFNSFEAEQILNIPLSWRLPADK 598

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLP-TSSGLDKGTWEWMWKLDIPPKITLFLWR 1619
            L+W++ K+G + VRS YH+    +N  QN P  SS  D   W+ +WK+ +P  I  FLWR
Sbjct: 599  LIWHWEKNGEFSVRSAYHMLSEIRN--QNSPEASSSRDHLLWKAIWKVKVPNCIKNFLWR 656

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQE 1799
              K ILPT++ L K+GI +D  C  C   IE  EH    CP +   W + P      P  
Sbjct: 657  LAKAILPTRSRLEKKGITLDTTCPLCFNDIECNEHLFMHCPLSKQVWFSSPLGLH-APN- 714

Query: 1800 LNGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEE 1979
             N  +  W+       +  A +LF+T LW  W  RN+    + +    +  + +   + E
Sbjct: 715  -NVGLISWMQLWLSNPDKLASQLFSTTLWMIWKGRNKLIFKNVKFCPIYVAAASSDFVAE 773

Query: 1980 HKQGKKVQPRTDVKERDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQIITTLS 2159
               G        V+E    W  P    FK+N DA       TG G ++R+  G +    +
Sbjct: 774  FNSGSCCNESNIVRENPDSWEPPEQAKFKVNIDAGCFSNGTTGWGMIMRNHLGMVDFAAT 833

Query: 2160 RLYEDEMEIEVAEAIACR 2213
             L + ++   +AEA+A R
Sbjct: 834  HLEKIKVSPTLAEAMALR 851


>gb|PNY15111.1| ribonuclease H [Trifolium pratense]
          Length = 1334

 Score =  625 bits (1613), Expect = 0.0
 Identities = 321/768 (41%), Positives = 464/768 (60%), Gaps = 2/768 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NR+K +LPD++   QSAFV GRLITDNAL+A E FH MK+    K+G+ ALKLDMSKAYD
Sbjct: 498  NRIKPILPDIVDEEQSAFVQGRLITDNALIAMECFHWMKKKKRGKKGTMALKLDMSKAYD 557

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            R+EW F+K  +  MG     V+LIMKC+ TVS+ IL+NG P ++F P RGLRQGDPLSPY
Sbjct: 558  RIEWTFVKATLNSMGFPCKLVDLIMKCICTVSYQILINGQPSKLFTPERGLRQGDPLSPY 617

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +++K    G +HG+++ R+AP I+HLFFADDS++F RA+  E   I N+
Sbjct: 618  LFILCADVLSGLVKKQAETGSMHGIQIARQAPKISHLFFADDSLLFARASAAEAGVILNV 677

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            +  Y+ ASGQ +N+ KS +SFS+ V    +  +  ++GV  V+ H+ YLGLP V GRSKK
Sbjct: 678  LAEYQKASGQVVNLDKSEVSFSQNVRNEDKDMIRNRMGVKTVDTHSKYLGLPVVFGRSKK 737

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
             IF  +IDRV KKLK WK   LS AGK ILIK++AQAIP+YIM  + LP   C+++ +++
Sbjct: 738  IIFSFVIDRVWKKLKGWKEKCLSRAGKEILIKAVAQAIPNYIMGCYKLPNSCCQEIETML 797

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            + FWWG K  ER+ HW SW RL K KK+GG+GFR I  FN+A+L K  WRL+  E SL+ 
Sbjct: 798  AKFWWGSKGGERKIHWMSWERLSKTKKDGGMGFRGINNFNKALLGKHCWRLMTGEESLMG 857

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            +  K+RYFP  SFLEA IGY PS+ WRSI +  D++  G RW IG+G+SV+I  D WL +
Sbjct: 858  RIFKSRYFPRTSFLEAKIGYQPSYAWRSIQSATDVMKLGTRWRIGNGESVKIREDRWLPN 917

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            Q GFK+ +      +   V+ L+  +   WN  ++ + F   + K I +IP+      D+
Sbjct: 918  QVGFKVWSRGEELENGALVSALIDPDTKQWNRQLVVQTFYPDEAKQILSIPISQRLPADK 977

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLD-KGTWEWMWKLDIPPKITLFLWR 1619
            ++W++ +DG Y VRS +H+ K   +  +++  SSG      W  +WK  +P ++  FLWR
Sbjct: 978  IIWHYERDGEYSVRSAHHLLKQHNS--RDVAASSGQQMNNLWREIWKAPVPNRVRNFLWR 1035

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQE 1799
              K ILPT+  L+++G+Q++ LC +C  A ET +H    C      W A     R  PQ 
Sbjct: 1036 LGKNILPTRANLVRKGVQIENLCPQCHSAPETIDHLFLHCHLTQLTWFASQLGAR-VPQS 1094

Query: 1800 LNGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEE 1979
            +  +I  W+       + +  +LF  L+W  W+ARN    N+K +D       A   ++E
Sbjct: 1095 VPVHI--WLLQGLTCDDTRGAQLFCVLMWKIWNARNNLVFNNKLVDPIAIAQEAMYFMQE 1152

Query: 1980 HKQGKKVQPRTDVKERD-AVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQIITTL 2156
                      T +++   A    P++ H     DA    G  TG G VI + +G+++ + 
Sbjct: 1153 LSPSPHEHNATPMQDAVLAAQPMPSAPHV-FYVDAGCFSGNATGWGMVIYNQSGRVVLSA 1211

Query: 2157 SRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRS 2300
             R    ++E  +AEAI  R  +  A  L +  +V+  D  T+ + + S
Sbjct: 1212 CRKELIDVEPVLAEAIGVRWCLQKAIELNMTDIVIVSDAATVVSCINS 1259


>ref|XP_010682492.1| PREDICTED: uncharacterized protein LOC104897331 [Beta vulgaris subsp.
            vulgaris]
          Length = 1212

 Score =  619 bits (1597), Expect = 0.0
 Identities = 341/776 (43%), Positives = 462/776 (59%), Gaps = 8/776 (1%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRL+ +LPDLISPYQSAFVPGRLITDNA++A+E FH MKR+   K GS A KLDMSKAYD
Sbjct: 375  NRLEVILPDLISPYQSAFVPGRLITDNAMIAYEIFHYMKRSGDSKTGSMAFKLDMSKAYD 434

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+ VM KMG C+S+V  IM C+S+VS++  LNG       P+RGLRQGDPLSPY
Sbjct: 435  RVEWSFLEQVMRKMGFCDSWVRRIMVCLSSVSYAFKLNGKVTGNIIPSRGLRQGDPLSPY 494

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LFL CAEAFS+++ KA   G IHG +VCR AP I+HLFFADDSI+F RA   E   +A+I
Sbjct: 495  LFLLCAEAFSTLLAKASDDGRIHGARVCRSAPRISHLFFADDSILFTRATLQECSVVADI 554

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I  YE ASGQ+IN +KS +SFSK VD   R  +   +GV  V KH  YLGLPT+IGRSKK
Sbjct: 555  ISVYERASGQKINFNKSEVSFSKNVDDSRRVEIRSMLGVREVVKHDKYLGLPTLIGRSKK 614

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
             +F  + +RV KKL+ WK   LS AGK +LIK++ QAIP+Y+MS F +P    + +NS+ 
Sbjct: 615  AVFAVLKERVWKKLQGWKEKLLSKAGKEVLIKAVIQAIPTYMMSLFAIPDGILEDINSMC 674

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            + FWW      R+ HW SW + C PK  GG+GFR+++ FN+A+LAKQGWRL+ D+ SL  
Sbjct: 675  ARFWWRATGMARKMHWISWEKFCLPKSYGGMGFRDLKTFNQALLAKQGWRLMCDDGSLAH 734

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            + ++ARYF N  FL+A  GY+PS  WRSI   + +L+ GL+W +G+G S+R+W   WL  
Sbjct: 735  QIMRARYFKNVPFLDARRGYDPSFVWRSIWGAKSLLMEGLKWRVGNGASIRVWDMAWLPG 794

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
                K+ T N  + +++ VA+L+  N   W+ A L     + D    + IPL      D 
Sbjct: 795  DSSSKVPTPNVESREDLMVADLLSVNGG-WDVAALAHHLTEEDAMLAREIPLSERYPIDV 853

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKG-TWEWMWKLDIPPKITLFLWR 1619
            L W  +KDG++  +S Y + +     ++      G   G  W  +WKL   PK+  FLWR
Sbjct: 854  LYWWPAKDGIFSTKSAYWLGRL--GHVRGWMNRFGGGHGDAWSIIWKLGGLPKLAHFLWR 911

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQE 1799
               G L T+  L  R I  D  C  C    +T  HA+ +C      WAA PF+   +   
Sbjct: 912  ACVGALATRGRLRDRHIIADGQCIHCVGQTDTIVHAVCKCSLVASIWAASPFQQLLSDCN 971

Query: 1800 LNG--NIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRL 1973
             +   ++  W+ +     +L +   FA+L W AW  RN   H+    + Q       R +
Sbjct: 972  ASSFVDLLLWLNSKLDRMDLLS---FASLAWAAWSFRNSVHHDEPWSNAQVGALGFLRLV 1028

Query: 1974 EEHKQ-GKKVQPRTD----VKERDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNG 2138
             ++K  G  V  R      V  R A W  P     ++NTDA+I+   G G+GAV+RDS G
Sbjct: 1029 HDYKSYGGAVLARPQGVLGVFSR-ASWIPPGEGAVRINTDAAILGDDGVGLGAVVRDSTG 1087

Query: 2139 QIITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKS 2306
            Q+     R  +      +AEA A + G+ ++R LG   + LEVD L +   L  +S
Sbjct: 1088 QVCAVAVRRVQARWPAGLAEAAAAKFGLLVSRELGYGHVELEVDALNLVKALHVRS 1143


>ref|XP_021836344.1| uncharacterized protein LOC110776087 [Spinacia oleracea]
          Length = 1416

 Score =  620 bits (1599), Expect = 0.0
 Identities = 330/777 (42%), Positives = 468/777 (60%), Gaps = 5/777 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            N+LK LL D+IS  QSAFVP RLITDNAL+AFE FH+MKR    K GS ALKLDM KAYD
Sbjct: 526  NKLKPLLGDIISVNQSAFVPKRLITDNALIAFEIFHAMKRRGEGKDGSVALKLDMKKAYD 585

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW FL+ VM ++G  +++V  IM C+S+VSF+  +NG       P+RGLRQGDP+SPY
Sbjct: 586  RVEWLFLEKVMYRLGFSDNWVRRIMDCLSSVSFAFKINGRISGSVTPSRGLRQGDPISPY 645

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LFL  A+AFS++I KA    LIHGVK+C  AP ++HLFFADDSI+F +A   E   IA+I
Sbjct: 646  LFLIVADAFSTLIAKAAREKLIHGVKICNGAPRVSHLFFADDSILFAKATVRECSVIADI 705

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I  YE ASGQ +N+ K+ + FSK V+   R  ++  +GV  VE+H  YLGLPT+IGRSKK
Sbjct: 706  ISKYERASGQSVNLDKTDVVFSKCVEDNRRQEIVTTLGVKEVERHEKYLGLPTIIGRSKK 765

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
             IF +I +R+ KKL+ WK   LS  GK +LIK++AQAIP+Y+MS F +P E   +++SII
Sbjct: 766  VIFASIKERIWKKLQGWKEKLLSRPGKEVLIKAVAQAIPTYMMSIFKIPDELLDEIHSII 825

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            ++FWWG     R+ HW SW  LCKPK  GG+GFR+++ FN+A+LAKQ WRL +D +S L 
Sbjct: 826  ASFWWGSNGTARKMHWYSWESLCKPKAMGGMGFRDLKVFNQALLAKQMWRLQSDTSSFLH 885

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
              LKARYF + S L+A  G++PS++WRS+   + +L+ GL+W +G+G S+ +W D W+  
Sbjct: 886  TVLKARYFKHDSVLDARRGFDPSYSWRSLWGSKSLLLEGLKWRVGNGASINVWEDGWIPG 945

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            +       +   T +   VA+ +  N  +W+  +++E F  +D K I   PL I    D+
Sbjct: 946  KSTAPEPRSLEATGNIATVADCIDHNYRVWDERIVKENFSDNDCKLILQTPLSIFPTIDQ 1005

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWRC 1622
            + W+ +KDGVY V+SGY +    +   Q   ++  +D   W  +W L  PPK++ F+W+ 
Sbjct: 1006 MYWSPTKDGVYTVKSGYWVRILGR---QQAESNDNID--LWRLVWGLGGPPKLSHFVWQA 1060

Query: 1623 IKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQEL 1802
             KG +  K  L KR I  D LC  CG+ +E+  HAL EC      W    +         
Sbjct: 1061 CKGGMAVKEVLFKRHIAQDELCPCCGVEVESINHALLECDTVKVAWETSKYADLVEAAPT 1120

Query: 1803 NGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEEH 1982
                +      SKTG  + +E+ A + W  W  RN+  H  + ++ Q   +   + +E++
Sbjct: 1121 GSFASKLQWWASKTGANEVREIMA-IAWAIWFCRNKYVHEKETMNVQIKAASFLKLVEDY 1179

Query: 1983 ----KQGKKVQPRTDVKERDA-VWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQII 2147
                KQ     P        A  W  P S   K+N DA +V G+  G+GAVIRD +G+II
Sbjct: 1180 RTYAKQVFHSSPSNVTHTLSASQWKCPPSGLVKVNIDAHVVEGSYVGLGAVIRDVHGKII 1239

Query: 2148 TTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKSMDFS 2318
               +R  +   +  +AEA A R G+ +A+  G   + LE D + +   + + S  FS
Sbjct: 1240 MAAARRLDITWDASIAEAAAARFGLQIAQRFGYNSVWLEGDAINVVKAVENASDGFS 1296


>ref|XP_024195790.1| uncharacterized protein LOC112198938 [Rosa chinensis]
          Length = 1175

 Score =  613 bits (1581), Expect = 0.0
 Identities = 333/785 (42%), Positives = 469/785 (59%), Gaps = 8/785 (1%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLK LL D+IS  QSAFVPGRLI+DN+LLAFE  H +KR      G  ALKLDMSKAYD
Sbjct: 367  NRLKPLLDDIISQQQSAFVPGRLISDNSLLAFEISHCLKRRRRGNVGFCALKLDMSKAYD 426

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+ V+ K+G   +++   M CV TVS+S L+NG P    +P+RGLRQGD +SPY
Sbjct: 427  RVEWDFLEAVLDKLGFGATWIRWTMACVRTVSYSFLVNGDPCGNIYPSRGLRQGDAISPY 486

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LFL CAE  S MI++AE   L+HGV   R+APAI+HLFFADDS IF +A  T++ C+ +I
Sbjct: 487  LFLLCAEVLSRMIKEAERNDLMHGV---RQAPAISHLFFADDSFIFSKAETTDILCMRDI 543

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
             + YE  SGQ+IN  KS ISFSK V +  +  L   +GV  V+KH  YLGLPT +  SK 
Sbjct: 544  FQKYEQMSGQQINYEKSCISFSKNVPRWKQDDLACVLGVKRVDKHDKYLGLPTELSYSKD 603

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            E FR ++DRV+ + + W+  TLS AGK +LIK++ Q+IP+Y+MS F LP+  C +++ ++
Sbjct: 604  EAFRYLVDRVRTRTQGWRNKTLSTAGKEVLIKAVVQSIPTYVMSCFELPKHLCDEMHRLM 663

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            + FWWG+   ER+ HW +W++LC PKKEGGLGFR++  FN A+LAKQGWRLI   +SLLA
Sbjct: 664  ARFWWGEFGAERKIHWVAWDKLCAPKKEGGLGFRDMHLFNTALLAKQGWRLICRPDSLLA 723

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            +  KARYFPN  F+ A +    S +WRSI+ GRD+L +GLR+ +G+G+ + IW+DPW+  
Sbjct: 724  QVFKARYFPNTDFMHAVLHKGASFSWRSIMKGRDLLKKGLRFQVGNGEDISIWNDPWVPL 783

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
               FK  +     ++++RV +L+ E    W   +L ELF   ++ +I  IPL ++   DR
Sbjct: 784  PYRFKPFSIPMQGAEDLRVVDLIDEETGDWQEWLLHELFTPMEVVNIMKIPLSLSGGIDR 843

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSS-GLDKG-TWEWMWKLDIPPKITLFLW 1616
            LV +F K G Y V++GYH+A+      +    SS G D+   W  +WK+++PPK+ +  W
Sbjct: 844  LVCHFDKKGRYSVKNGYHVARVMDTLERTTSGSSFGADRARLWGKLWKVNVPPKVRMHAW 903

Query: 1617 RCIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQ 1796
            R +KG+LPT+  L KR    D  C  C   +E + H  + C     FW       +  P 
Sbjct: 904  RLVKGMLPTRATLAKRVQLSDVRCVYCSNGVEDSLHLFKNCDALRTFWMHSSLELQ--PG 961

Query: 1797 ELNGNIAD-WITTMSKTGELKAQELFATLLWTAWHARN----EATHNHKELDHQWCFSFA 1961
            +    + D W   M      +  E F   LW  W  RN    +A+ ++    H W  SF 
Sbjct: 962  KHPSIVLDVWFWYMVDALNGEKLEYFLMALWVVWMERNNIVWKASVSNPTNMHAWAKSFL 1021

Query: 1962 ERRLEEHKQGKKVQPRTDVKERDAVWTKPNSDHFKLNTDASIVPGT-GTGIGAVIRDSNG 2138
                + HK+      R+ +K     WT P     K+N D S    T G G+G V+R+  G
Sbjct: 1022 HEYKQLHKRQGGKAKRSLIK-----WTCPPRGRLKINIDGSFCTETGGGGVGVVVRNFEG 1076

Query: 2139 QIITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKSMDFS 2318
              + T  R +         EA A R G+ +A     K++++E D + + + LR+   DFS
Sbjct: 1077 TCMATFVRPFHFAQSAIHMEAEALRAGLLIAIQQDWKEIIVESDCVNLVSALRATDDDFS 1136

Query: 2319 YAGNV 2333
              G +
Sbjct: 1137 SIGRI 1141


>gb|PNX92808.1| ribonuclease H [Trifolium pratense]
          Length = 930

 Score =  602 bits (1553), Expect = 0.0
 Identities = 324/784 (41%), Positives = 450/784 (57%), Gaps = 9/784 (1%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLK +LP++ISP QSAFV  RLITDN L+A+E FH   ++ +KK G   +K DM+KAYD
Sbjct: 84   NRLKLILPEIISPNQSAFVSDRLITDNTLVAYEVFHFFNQSSSKK-GFIGIKTDMAKAYD 142

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEWNFL+  +  MG      + IM CV  V FSIL+NG P Q F P RGLRQGDPLSPY
Sbjct: 143  RVEWNFLQITLETMGFPQHLTDTIMNCVKNVMFSILINGKPSQNFIPQRGLRQGDPLSPY 202

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA  FS ++ KA+T   IHGVKV   AP ++HL FADDS++F +A   E   I NI
Sbjct: 203  LFIICANVFSGLLTKAQTERRIHGVKVAHGAPEVSHLLFADDSLLFCKATVQEATVIKNI 262

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I  Y+ ASGQ +NM KS I +S+ V    +  +   + +  V   + YLG+PT +GRSK+
Sbjct: 263  ILEYQEASGQLVNMEKSEIVYSRHVPHQIKENIGHILPMKRVNHFSKYLGMPTHVGRSKR 322

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            ++F  I D V KK+K WK   LS AG+  LIK++AQAIP+Y+MS FLLP+E C  + S+I
Sbjct: 323  QVFDYIQDCVWKKIKGWKAQHLSFAGRSTLIKAVAQAIPTYVMSCFLLPKELCSHIESMI 382

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
              FWWG   ++R+ HW  W+ +CK KK+GGL FRE++ FNEA+LAKQGWR I   NS++A
Sbjct: 383  CKFWWGSNNDKRKIHWIKWSTICKHKKKGGLSFRELRAFNEALLAKQGWRCITQPNSMVA 442

Query: 1083 KTLKARYFPNKSFLEATIG-YNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQ 1259
            + LKA+Y+P  + LEA IG  N S+TWRSI     IL +G  WNIG+G +  IW D WL 
Sbjct: 443  QVLKAKYYPKTTLLEADIGSKNVSYTWRSISKASWILKKGGLWNIGNGATTNIWTDNWLP 502

Query: 1260 DQPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPD 1439
             Q G KI +   G +    V +LM+  +  WN  ++ + F Q + + I  IP+    RPD
Sbjct: 503  RQQGHKIWSPK-GEATQTWVKDLMIPEIRSWNRQLIFDTFMQFEAEQITQIPIVHLSRPD 561

Query: 1440 RLVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDK--GTWEWMWKLDIPPKITLFL 1613
               W ++KDG+Y V+SGY   +  K    N P++S   K    W+ +W L IPPK T  +
Sbjct: 562  EFSWPYTKDGIYTVKSGYQAIQDWKE-DPNKPSTSYKPKNNSVWQKLWHLKIPPKYTHLI 620

Query: 1614 WRCIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTP 1793
            WR ++  LP ++ L KRG+   PLC RC   IE   H    C WA   W A P   +F  
Sbjct: 621  WRILQDALPVQSNLRKRGVNCYPLCPRCKENIEDLNHVFSGCWWAKQVWFASPLTLKFDQ 680

Query: 1794 QELNGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRL 1973
             E   +  +WI    +  + +   L   + +  W ARN  T  +K +        A+  L
Sbjct: 681  NEF--SFKNWIEDNIRKDQSQNMNLIGAICYHIWRARNLLTFQNKNVPVLDVIHRAQECL 738

Query: 1974 -EEHKQGKKVQPRTDVKER-----DAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSN 2135
             E H+Q K +  + +   R     D+ W  P  D  KLN DA ++     G+G ++R  +
Sbjct: 739  FEYHRQVKPISEQVNRNTRARSNNDSDWIPPPKDTLKLNVDAHLMGDGHWGLGWILRKED 798

Query: 2136 GQIITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKSMDF 2315
            G ++   +++     E   AEA+   E +          +++E DN +I   +  +S   
Sbjct: 799  GSLVGAATKVVRGLNEAIEAEAMGVVEAIMFLTEFQNGSVIIETDNASIVKAIHRRSYPR 858

Query: 2316 SYAG 2327
             Y G
Sbjct: 859  LYWG 862


>ref|XP_010682933.1| PREDICTED: uncharacterized protein LOC104897695 [Beta vulgaris subsp.
            vulgaris]
          Length = 1326

 Score =  613 bits (1582), Expect = 0.0
 Identities = 331/775 (42%), Positives = 455/775 (58%), Gaps = 7/775 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLK  L DLIS +QSAFVPGRLITDNA+ AFE FHSMKR    K+G  A KLDMSKAYD
Sbjct: 489  NRLKVFLSDLISLHQSAFVPGRLITDNAMTAFEIFHSMKRGGDGKKGVMAFKLDMSKAYD 548

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+ VM ++G C  +V  IM+C+S+VS+S  LNG       P+RGLRQGDPLSPY
Sbjct: 549  RVEWSFLERVMGRLGFCEGWVRRIMECLSSVSYSFKLNGSVEGNIIPSRGLRQGDPLSPY 608

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LFL CAEAFS+++ KA   GLIHG +VCR AP I+HLFFADDSI+F RA   E   +A+I
Sbjct: 609  LFLLCAEAFSALLSKAAGDGLIHGARVCRSAPRISHLFFADDSILFTRAALQECSVVADI 668

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            + +YE ASGQ+IN  KS +SFSK VD   +  +    GV  VE+H  YLGLPTVIGRSKK
Sbjct: 669  LSTYERASGQKINFDKSEVSFSKNVDDSRKNDIRSLFGVREVERHEKYLGLPTVIGRSKK 728

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
             +F  + +RV KKL+ WK   LS AGK +L+K++ Q+IP+Y+MS F +P     ++N++ 
Sbjct: 729  MVFTVLKERVWKKLQGWKEKLLSRAGKEVLLKAVIQSIPTYMMSLFAIPDCILSEINAMC 788

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            + FWWG +  ERR HW SW ++C PK  GG+GFR+++ FN+A+LAKQGWRL+    S+  
Sbjct: 789  ARFWWGSRGTERRMHWLSWEKMCLPKAYGGMGFRDLKVFNQALLAKQGWRLLCHNGSMAH 848

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
                ARY+P  +FL A  G++PS+ WRSI   + +L+ GL+W +GDG S+ +W + WL  
Sbjct: 849  AVFNARYYPRSNFLNARRGFDPSYVWRSIWGAKSLLLEGLKWRVGDGSSIGVWEESWLPG 908

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            +    + T N  +  ++RV++L ++    W+  +LR  F + DI  I+ IPL   K PD 
Sbjct: 909  ESAAVVPTPNMESPADLRVSDL-LDASGRWDELVLRNHFTEEDILLIREIPLSSRKPPDL 967

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWRC 1622
              W  S DG +  +S Y + +   +    L    G +   W+ +W L+ PPK+  FLWR 
Sbjct: 968  QYWWPSTDGFFTTKSAYWLGR-LGHLRGWLGHFGGANGEVWKVIWGLEGPPKLKHFLWRA 1026

Query: 1623 IKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFR--CRFTPQ 1796
              G L T+  L +R I  D  C+ C    E+  HA+  C      W   PF    R  P 
Sbjct: 1027 CMGALATRGRLKERHIVEDGCCTHCNREDESIVHAIFRCSLVSPIWENSPFTYYVRDGPT 1086

Query: 1797 ELNGNIADW-ITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRL 1973
                +   W I+ M +T  L     F  + W AW  RN  T      +         + +
Sbjct: 1087 SSFMDFFVWLISRMERTDLLS----FMAMAWAAWSYRNSVTFEEPWSNVTVSVVGFMKLV 1142

Query: 1974 EEHKQGK----KVQPRTDVKERDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQ 2141
             ++K       +  P T      + W  P+   F+LNTDA+++     G+GAV+RDS G 
Sbjct: 1143 SDYKSYAALVFRAGPVTTGFPSRSSWVAPDEGRFRLNTDAAMLAEGLVGVGAVVRDSRGS 1202

Query: 2142 IITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKS 2306
            ++    R Y     + +AEA+  R GV +A+  G + L LE D   I   L  K+
Sbjct: 1203 VLLVAVRRYRVRWTVTLAEAMGARFGVEMAKQFGYEALELECDASNITKALCRKA 1257


>ref|XP_023905045.1| uncharacterized protein LOC112016795 [Quercus suber]
          Length = 1373

 Score =  614 bits (1583), Expect = 0.0
 Identities = 320/778 (41%), Positives = 453/778 (58%), Gaps = 9/778 (1%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLK  LPD+IS  QSAF+  RLITDN L+AFET H + +  + + G  ALKLDMSKA+D
Sbjct: 530  NRLKRFLPDIISENQSAFMSTRLITDNVLVAFETMHHLNQKRSGRVGEMALKLDMSKAFD 589

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW  L ++MLKMG    +VNL+M CV++V++SI +NG P     PTRGLRQGDP+SP+
Sbjct: 590  RVEWGCLHDIMLKMGFHTKWVNLMMLCVTSVTYSIRINGEPRGHITPTRGLRQGDPISPF 649

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LFLFCAE  S+++ +A   G IHGV  C R P I+HLFFADDSIIF RA   E   + +I
Sbjct: 650  LFLFCAEGLSALLNQASRSGAIHGVAACPRGPRISHLFFADDSIIFCRATNAECAHLEHI 709

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            +++YE ASGQ++N  K+A+ FS+      +  +  + G   + +H  YLGLP+++GRSK+
Sbjct: 710  LETYEQASGQQLNRDKTALFFSQNTALEVQEDIKHRFGAEVIRQHETYLGLPSLVGRSKR 769

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
              FRA+ +R+  KL  WK   LS AGK +LIK++AQAIP+Y MS F LP   C ++ S +
Sbjct: 770  NTFRALKERLDNKLSGWKEKLLSQAGKEVLIKAVAQAIPTYTMSVFKLPNSLCDEMTSTV 829

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
             NFWWGQK+   +  W SW ++C PKK+GGLGFR+++ FN A+LAKQGWRL ++  SL+ 
Sbjct: 830  RNFWWGQKEGRNKMAWLSWEKMCAPKKDGGLGFRDLKAFNMALLAKQGWRLQSNTRSLVH 889

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            + LKARYFP++ FL A +G  PS+ WRSI+A +D++  G RW +GDG S++IW D WL  
Sbjct: 890  RVLKARYFPDRDFLHAELGRTPSYAWRSIMAAQDVVKAGHRWQVGDGTSIQIWRDKWLPK 949

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
               F++++     ++   V+EL+ E    WN  +++ +F   D  +I  IP    +  DR
Sbjct: 950  PSTFRVISTPNTLNEAATVSELIDEVTGEWNVDLVKHVFLPDDAHTILGIPRSSKRNRDR 1009

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKGT-WEWMWKLDIPPKITLFLWR 1619
            ++W ++  G + V S Y +A +         TS        W+ +W L IP K+  F WR
Sbjct: 1010 MIWAYTPKGTFTVNSAYKVALSLSQSKAKEETSDASSHSQFWQKIWSLRIPNKLKTFAWR 1069

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAG--PFRCRFTP 1793
              + ILPTK  L  RG+  DP C  CG+  ET+ H   +C  A   W A   PF      
Sbjct: 1070 ASRNILPTKANLCSRGVIDDPTCDACGLNAETSGHLFWDCRHAHEVWTATGIPF------ 1123

Query: 1794 QELNGNIAD-----WITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSF 1958
              L  +  D     W     +       EL  T+ W  W+ RN   H             
Sbjct: 1124 DNLGVHYRDFIDLLWYLIFRQHVGQDVLELIITIAWCMWYNRNRVRHGSPRQSSNEILHK 1183

Query: 1959 AERRLEEHKQGKKVQPRTDVKERDAVWTKPNSDHFKLNTDASIVPGTGT-GIGAVIRDSN 2135
            A   +E+ +      P+      D  W  P+S  FK+NTDA+I    G+ GIG VIRD  
Sbjct: 1184 ARTVMEDFQLAHFACPQ-PTDPLDTRWVPPSSPWFKVNTDAAIFKNLGSVGIGTVIRDHA 1242

Query: 2136 GQIITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKSM 2309
            G +I  LS+     +    AEA A    V  A ++G+++++LE D+  I++ L   ++
Sbjct: 1243 GMVIAALSQHLHLPLGPLEAEAKAMDVAVSFAWDVGVQEVILETDSHVIFSALSGSTI 1300


>gb|PNY03092.1| ribonuclease H [Trifolium pratense]
          Length = 970

 Score =  599 bits (1545), Expect = 0.0
 Identities = 311/774 (40%), Positives = 456/774 (58%), Gaps = 6/774 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NR+K++LP++ISP QSAF+ GRLITDN ++A + F+ +     +K G   +K DM+KAYD
Sbjct: 140  NRIKTILPEIISPNQSAFIQGRLITDNTIIASDIFNYLSHT-NRKNGFVGIKTDMAKAYD 198

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+  +  MG     + +IMKCV+TV+FSIL+NGHP   F P RG+RQGDPLSPY
Sbjct: 199  RVEWDFLEATLTAMGFPTKMIQIIMKCVTTVTFSILINGHPSIEFQPQRGIRQGDPLSPY 258

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +I KA+    IHGVK+   AP I+HL FADDS+ F RA   E+  I+NI
Sbjct: 259  LFIICADVLSGLITKAQKEHSIHGVKIAPGAPEISHLLFADDSLFFCRATTGEVNTISNI 318

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I++Y+ ASGQ +N++KS + FSKGV    +  + + + +  ++  + YLG+PT IGRSK 
Sbjct: 319  IQTYQEASGQLVNLTKSEMVFSKGVPNTIKDDISKILPIQILDHFSKYLGMPTFIGRSKN 378

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            +            LK WK   LS AG+ ILIK++AQAIP+YIMS+FL+P+E C ++  +I
Sbjct: 379  Q------------LKGWKERNLSFAGRGILIKAVAQAIPNYIMSSFLIPKEVCAQMEKMI 426

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
             NFWWG   + R+ HW +W ++C+ KK GGLGFRE++ FNEA+LAKQGWR+I   +SL+A
Sbjct: 427  CNFWWGSTTDSRKIHWINWQKICRQKKTGGLGFRELRAFNEALLAKQGWRIICQPSSLMA 486

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            + LKA+YFPN  FL+A    + S+TWRSIL  R I+ +G  WNIG G+ V IW D W+  
Sbjct: 487  QVLKAKYFPNDQFLQAKPKQHMSYTWRSILQARWIIKKGCYWNIGTGEEVDIWKDNWIHQ 546

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            +      ++ P  + + +V ++M  +   WN  ++ +LF   + + I  IP+    +PD 
Sbjct: 547  KGNSSTWSSKPNLTTHHKVKDIMNIHNNSWNETIINQLFLPIEAQKILQIPITGTSQPDA 606

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWRC 1622
            L+W  + DG Y V+SGY          Q   ++S  +   W  +WKL+IPPK +  LWR 
Sbjct: 607  LIWAGTIDGHYTVKSGYQAITEWSESTQ--ASTSANNDDIWPMLWKLNIPPKHSHLLWRA 664

Query: 1623 IKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQEL 1802
            +   +P K  L K+G++ DPLC RC   +ET  HA  +C WA   W +          + 
Sbjct: 665  LNEAIPVKGNLFKKGVKCDPLCPRCFNHVETIHHAFLDCVWAKQMWFSSNLTINLNHCQ- 723

Query: 1803 NGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEEH 1982
            + N+ DW+  M K  +  ++EL  + L+  W+ARN      K L      S A  +L+E+
Sbjct: 724  HTNLHDWVMHMFKQTDQASRELITSNLYGIWYARNLLVFQGKSLPPHEVSSIALAQLQEY 783

Query: 1983 -----KQGKKVQPR-TDVKERDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQI 2144
                 K+    Q R T     +  W+ P     K+N DA +        G ++R  +G  
Sbjct: 784  QKHCIKKNFVNQTRATGNSSNNNCWSPPPRGTLKINVDAHLGGDGHWFSGIILRGCDGNA 843

Query: 2145 ITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNKLRSKS 2306
            I   +RL+    EI   EA      + L   LGI K+++E D+ +  N ++ K+
Sbjct: 844  IGAATRLHAKSNEIIQGEAFGINAALDLVEXLGISKVIIESDSQSFVNLVKKKT 897


>ref|XP_019106889.1| PREDICTED: uncharacterized protein LOC109135783 [Beta vulgaris subsp.
            vulgaris]
          Length = 1569

 Score =  616 bits (1589), Expect = 0.0
 Identities = 339/789 (42%), Positives = 464/789 (58%), Gaps = 17/789 (2%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            N+LK  L  LIS  QSAFVP RLITDNAL+AFE FH MKR    K G+ ALKLDMSKAYD
Sbjct: 732  NKLKKCLESLISINQSAFVPKRLITDNALIAFEIFHYMKRKGEGKDGTVALKLDMSKAYD 791

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+ VMLK G    ++  IM C+ +VSFS  LN        P RGLRQGDP+SPY
Sbjct: 792  RVEWSFLEKVMLKFGFDVGWIQKIMWCLQSVSFSFKLNNTVCGHVVPGRGLRQGDPISPY 851

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LFL CA+AFS ++ KA     IHGV++CR AP I+HLFFADDSI+F RAN  E   IA+I
Sbjct: 852  LFLLCADAFSMLLDKAARERAIHGVRICRGAPRISHLFFADDSILFARANLRECSQIADI 911

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            IK YE ASGQ++N+SK+ ++FSK V    R  +++ +GV  V++H  YLGLPT+IGRSKK
Sbjct: 912  IKLYERASGQKVNLSKTDVAFSKKVSVARREEIVDTLGVREVDRHEKYLGLPTIIGRSKK 971

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
             +F  + +R+ KKL  WK   LS  GK +LIK++AQAIP+Y+MS F LP     +++++ 
Sbjct: 972  AVFACLKERIWKKLTGWKEKLLSRPGKEVLIKAVAQAIPTYMMSIFRLPDGLIDEIHALF 1031

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            + FWWG    E++ HW +W  LC PK  GG+GFR+++CFN+AMLAKQ WRL  + +SLL 
Sbjct: 1032 AKFWWGSNDVEKKMHWHNWESLCLPKAMGGMGFRDLKCFNQAMLAKQCWRLFENPHSLLY 1091

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            K  KARYF +  FL A  G++PS++WRSI   + +L+ GLRW +G+G S+++W + WL D
Sbjct: 1092 KVFKARYFKHDEFLTAHRGFDPSYSWRSIWGAKSLLLEGLRWRVGNGVSIKVWDEAWLAD 1151

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPL-RINKRPD 1439
                K+ T       ++ V+EL+   +  WN A +RE   ++D   +  IPL +   R D
Sbjct: 1152 DDANKVPTPTAAAEPHILVSELIDHELGWWNEAKVREQMVEADADRVLNIPLSKFWPRDD 1211

Query: 1440 RLVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGL-DKGTWEWMWKLDIPPKITLFLW 1616
            +  W  SK GVY+V+SGY + +  K   +     +GL +   W+ +W ++ P K+  F+W
Sbjct: 1212 KFWWP-SKTGVYEVKSGYWMGRLGKT--RAWQWGAGLIEMDLWKHVWAIEGPNKLKHFVW 1268

Query: 1617 RCIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFR--CRFT 1790
            R  KG L  K  L  R I  D LC  CG  IET  H+L  C  AV  W    FR   +  
Sbjct: 1269 RACKGSLAVKERLFYRHITPDNLCQICG-GIETIIHSLFYCKHAVEMWRHSRFRDEIQAA 1327

Query: 1791 PQELNGNIADWITTMSKTGELKAQELFATLLWTAWHARN------------EATHNHKEL 1934
            P +    +  W+ TM    +L+   +F+TL W AW  RN                 + ++
Sbjct: 1328 PHDSFAELFRWMITMLSKEDLR---IFSTLAWAAWTCRNHEIFELTPPSPSHVATGYCKM 1384

Query: 1935 DHQWCFSFAERRLEEHKQGKKVQPRTDVKERDAV-WTKPNSDHFKLNTDASIVPGTGTGI 2111
               WC         EH        R       +V W KP+    K+N DA + P    G+
Sbjct: 1385 VRDWC---------EHAANTSCPGRLQSGIPSSVGWHKPDVGWVKVNVDAYVGPNRVVGL 1435

Query: 2112 GAVIRDSNGQIITTLSRLYEDEMEIEVAEAIACREGVHLARNLGIKKLVLEVDNLTIYNK 2291
            GAV RDS G ++   +     E +  +AEA A R GV +AR +   K+ LE D +TI + 
Sbjct: 1436 GAVFRDSAGTLLMAAATRMNVEWDARLAEAAAARFGVMMARRMQYPKVWLEGDAMTIISA 1495

Query: 2292 LRSKSMDFS 2318
            +R K   ++
Sbjct: 1496 VRGKERGYA 1504


>gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1066

 Score =  600 bits (1548), Expect = 0.0
 Identities = 290/637 (45%), Positives = 404/637 (63%), Gaps = 1/637 (0%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NR+K++LPD+ISP QSAF+ GRLITDN L+A E FH +     +K G   +K DM+KAYD
Sbjct: 432  NRIKNILPDVISPNQSAFIKGRLITDNTLIASEIFHYLAHT-KRKNGFVGIKTDMAKAYD 490

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            RVEW+FL+  +  MG  ++ V  IMKCV TV FSIL+NGHP Q F+P RGLRQGDPLSPY
Sbjct: 491  RVEWDFLEATLSTMGFPSTMVATIMKCVKTVKFSILINGHPSQEFYPQRGLRQGDPLSPY 550

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA+  S +I KA+   LIHGV +C+ AP I+HLFFADDS+IF R+N  E+  I NI
Sbjct: 551  LFIICADVLSGLITKAQKEKLIHGVTICQGAPDISHLFFADDSLIFCRSNTKEVSTIQNI 610

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            I++Y+ ASGQ +N++KS + FSKGV    +  +   + +    + + YLG+P  +GRSKK
Sbjct: 611  IQTYQKASGQLVNLAKSEMVFSKGVPNNTKQDVSNILPMQIQNQFSKYLGMPIALGRSKK 670

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
            +IF  I +++ KKLK WK   LS AG+  LIK++AQAIP+Y+MS+FL+P+  C +L  +I
Sbjct: 671  QIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKAVAQAIPTYLMSSFLMPKGVCDQLEQMI 730

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
             NFWWG   + R+ HW  W+++C  KK+GG+GFR ++ FNEA+LAKQGWRLI   NSL+ 
Sbjct: 731  CNFWWGSSTDHRKIHWIKWSKVCTQKKQGGMGFRNLRAFNEALLAKQGWRLITQPNSLVT 790

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            + LKA+Y+P   FL AT   N S+TWRSIL    ++ +G  W IG G+ + IW D W+Q 
Sbjct: 791  QILKAKYYPKGDFLTATHKQNMSYTWRSILQASWVIKKGSYWTIGSGQDINIWEDNWIQQ 850

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
            +      ++ P      +V ELM  N   WN +++ ++F   +   I  IP+    +PD 
Sbjct: 851  KGNSTGTSSKPNNCGFTKVKELMDNNYNEWNASIINQVFNPYEAHMILQIPILDKTQPDT 910

Query: 1443 LVWNFSKDGVYKVRSGYH-IAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWR 1619
            L W+ ++DG Y V+SGYH I     N   N  TSS      W+ +WKL++PPK +  +WR
Sbjct: 911  LTWDGTRDGTYSVKSGYHAIIDWANNSNSNNATSSNCSMEIWKVLWKLNVPPKHSHLIWR 970

Query: 1620 CIKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQE 1799
             ++  +P K +L KRGI+ DPLC RC   +ET +H   +C W    W A P         
Sbjct: 971  SLRNAIPVKGSLFKRGIRCDPLCPRCLDHVETIQHVFMDCEWTKKVWFASPLTLNLNLNY 1030

Query: 1800 LNGNIADWITTMSKTGELKAQELFATLLWTAWHARNE 1910
            L     DWIT M    + +  E    +++  W+ARN+
Sbjct: 1031 LT-EFYDWITYMINNTDKECMEKIVAIIYEIWNARNQ 1066


>gb|PNX95041.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1348

 Score =  608 bits (1567), Expect = 0.0
 Identities = 306/740 (41%), Positives = 445/740 (60%)
 Frame = +3

Query: 3    NRLKSLLPDLISPYQSAFVPGRLITDNALLAFETFHSMKRNLAKKRGSFALKLDMSKAYD 182
            NRLK ++PD+I   QS FV GRLITDN L+A E FH +K+    K+G  A+KLDMSKAYD
Sbjct: 612  NRLKVIMPDVIDVEQSGFVQGRLITDNGLIAMECFHWLKKKRKGKKGMMAVKLDMSKAYD 671

Query: 183  RVEWNFLKNVMLKMGICNSFVNLIMKCVSTVSFSILLNGHPGQIFHPTRGLRQGDPLSPY 362
            R+EW F++ V++KMG  ++ V++IMKC+STVS+ IL+NG P   F P RGLRQGDP+SPY
Sbjct: 672  RIEWAFVQTVLVKMGFPDNIVSVIMKCISTVSYQILINGQPSISFTPDRGLRQGDPISPY 731

Query: 363  LFLFCAEAFSSMIRKAETMGLIHGVKVCRRAPAITHLFFADDSIIFGRANETELECIANI 542
            LF+ CA   S ++ K      IHG+KV RRAP I+HL FADDS++F RAN+ E   I + 
Sbjct: 732  LFILCANVLSGLLHKEVQSKRIHGIKVARRAPQISHLQFADDSLLFARANQHEANVILST 791

Query: 543  IKSYEMASGQRINMSKSAISFSKGVDQGCRARLIEKIGVPGVEKHAIYLGLPTVIGRSKK 722
            + +Y+ ASGQ +NM KS  SFS+ V +     +   +G   V     YLGLP + GRSKK
Sbjct: 792  LAAYQRASGQVVNMDKSEASFSRNVLEADSQFICNMMGAKTVASQNRYLGLPVIFGRSKK 851

Query: 723  EIFRAIIDRVQKKLKSWKCNTLSMAGKLILIKSIAQAIPSYIMSTFLLPQETCKKLNSII 902
             IF  + DRV KKLK WK  +LS AGK +LIK++AQAIP+Y+MS F +P + CK++ S++
Sbjct: 852  VIFSFVKDRVWKKLKGWKEKSLSRAGKEVLIKAVAQAIPNYVMSCFKIPNDCCKEIESML 911

Query: 903  SNFWWGQKKEERRTHWGSWNRLCKPKKEGGLGFREIQCFNEAMLAKQGWRLINDENSLLA 1082
            +NFWWG K+  ++ HW SW+R+   K +GG+GFR    FN+A+L KQ WRLI++E SLL 
Sbjct: 912  ANFWWGSKEGGQKMHWMSWDRMSSSKMKGGMGFRGFSNFNKALLGKQCWRLISEEESLLG 971

Query: 1083 KTLKARYFPNKSFLEATIGYNPSHTWRSILAGRDILVRGLRWNIGDGKSVRIWHDPWLQD 1262
            +  K+RY+PN SF+EA+ G+ PS+ WRSIL+ R+ + +G RW +G+G+ VRIW D WL  
Sbjct: 972  RIFKSRYYPNHSFIEASSGFQPSYAWRSILSAREHVQKGSRWIVGNGRKVRIWKDNWLPT 1031

Query: 1263 QPGFKILTNNPGTSDNMRVAELMMENVPLWNNAMLRELFCQSDIKSIQAIPLRINKRPDR 1442
               FK+ +          V+ L+ E++  W+  ++  +F   +   I ++PL  ++  D+
Sbjct: 1032 LSNFKVCSPISFLDGEATVSALIDEDLRKWDLNLVNSIFNNFEAGIISSMPLSFSQHEDK 1091

Query: 1443 LVWNFSKDGVYKVRSGYHIAKTTKNCIQNLPTSSGLDKGTWEWMWKLDIPPKITLFLWRC 1622
            LVW   K+G Y V+S YH+    ++ +++  +SS      W+ +W + +P +I  F+WR 
Sbjct: 1092 LVWTGEKNGGYSVKSAYHLL-CNESEVRHPESSSSAAGSFWKHLWAIPLPNRIKNFMWRL 1150

Query: 1623 IKGILPTKNALIKRGIQVDPLCSRCGMAIETAEHALRECPWAVFFWAAGPFRCRFTPQEL 1802
             K ILPT+  L++R + +DP+C  C   +E+ EH    CP     W A P   R  P   
Sbjct: 1151 AKNILPTRGNLLRRRVPLDPVCPLCFNDLESTEHLFLHCPLIKQVWLASPLGVRPPP--- 1207

Query: 1803 NGNIADWITTMSKTGELKAQELFATLLWTAWHARNEATHNHKELDHQWCFSFAERRLEEH 1982
            + ++  W+T      E  A +LF T LW  W  RN+    +   D       A+  + E 
Sbjct: 1208 HSDLVLWLTQWLNCKEPFAIQLFCTTLWKIWFFRNQTIFKNLAFDPIRVSCAAQNFVSEF 1267

Query: 1983 KQGKKVQPRTDVKERDAVWTKPNSDHFKLNTDASIVPGTGTGIGAVIRDSNGQIITTLSR 2162
                  + ++  ++    W  P  D FKLN DA          G VIR+ N +++   ++
Sbjct: 1268 SVSSTPREQSTGQQPRCDWVAPPPDFFKLNVDAGCGSMGQVSWGLVIRNHNAEVVFAATK 1327

Query: 2163 LYEDEMEIEVAEAIACREGV 2222
              E   E  VAEA+  R G+
Sbjct: 1328 KTEFVAEAVVAEALGLRWGL 1347