BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00030848
         (1281 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP50295.1| Retrovirus-related Pol polyprotein from transposo...    70   7e-11
gb|KYP37734.1| Transposon Ty3-I Gag-Pol polyprotein, partial [Ca...    71   9e-11
gb|KYP50646.1| Retrovirus-related Pol polyprotein from transposo...    69   2e-10
gb|KYP76390.1| hypothetical protein KK1_020631, partial [Cajanus...    68   2e-10
gb|KYP33953.1| Retrovirus-related Pol polyprotein from transposo...    67   4e-10
gb|EOY21357.1| RNA-directed DNA polymerase (Reverse transcriptas...    70   8e-10
gb|KYP39502.1| Retrovirus-related Pol polyprotein from transposo...    65   9e-10
gb|KYP42763.1| Retrovirus-related Pol polyprotein from transposo...    67   1e-09
gb|KYP53097.1| Retrovirus-related Pol polyprotein from transposo...    69   1e-09
gb|KYP39237.1| Retrovirus-related Pol polyprotein from transposo...    72   1e-09
emb|CAJ65807.1| polyprotein, partial [Citrus sinensis]                 72   1e-09
gb|KYP49089.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]    70   1e-09
gb|KYP32464.1| Retrovirus-related Pol polyprotein from transposo...    72   1e-09
ref|XP_020205892.1| uncharacterized protein LOC109791051 [Cajanu...    68   1e-09
gb|EOY14212.1| Retrotransposon protein, Ty3-gypsy sub-class, put...    70   1e-09
gb|KYP78070.1| Retrovirus-related Pol polyprotein from transposo...    67   1e-09
gb|KYP59429.1| Retrovirus-related Pol polyprotein from transposo...    70   2e-09
gb|KYP31939.1| Retrovirus-related Pol polyprotein from transposo...    67   2e-09
gb|KYP30913.1| Retrovirus-related Pol polyprotein from transposo...    66   2e-09
gb|KHN12505.1| Retrovirus-related Pol polyprotein from transposo...    65   2e-09

>gb|KYP50295.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 129

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++    + +    L  +LQTLRE+QL+A LSKCEFWLE V FLGH      I VD
Sbjct: 16   FIDDILVYSKTKEEHEEHLKVILQTLRERQLYAKLSKCEFWLEEVSFLGHVISSGGIAVD 75

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P K+EAV++ E+ K V+
Sbjct: 76   PSKVEAVLKWETPKSVS 92


>gb|KYP37734.1| Transposon Ty3-I Gag-Pol polyprotein, partial [Cajanus cajan]
          Length = 185

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++    R + +  L  VLQTL+EKQL+A LSKCEFWL++V FLGH   +  I+VD
Sbjct: 109  FIDDILVYSKTREEHVEHLRIVLQTLKEKQLYAKLSKCEFWLDNVNFLGHVTSEGGIVVD 168

Query: 1033 PQKIEAVVE*ESTKKV 986
            P K+EAV+E  + + V
Sbjct: 169  PAKVEAVLEWSAPRSV 184


>gb|KYP50646.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 128

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDDD-IIVD 1034
            FID  ++    R + +  L  VLQTL+EKQL+A LSKCEFWL+ V FLGH      I+VD
Sbjct: 16   FIDDILVYSKTREEHVENLRIVLQTLKEKQLYAKLSKCEFWLDSVNFLGHVISKGRIVVD 75

Query: 1033 PQKIEAVVE 1007
            P K+EAV+E
Sbjct: 76   PAKVEAVLE 84


>gb|KYP76390.1| hypothetical protein KK1_020631, partial [Cajanus cajan]
          Length = 111

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 34/56 (60%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = -3

Query: 1147 VLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVDPQKIEAVVE*ESTKKVT 983
            VLQTLRE+QL+A LSKC+FWLE V FLGH      I VDP K+EAV++ E+ K V+
Sbjct: 4    VLQTLRERQLYAMLSKCDFWLEEVSFLGHVISSGGIAVDPSKVEAVLKWETPKSVS 59


>gb|KYP33953.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 92

 Score = 66.6 bits (161), Expect = 4e-10
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++    R +    L  VLQTL+E+QL+A LSKC+FWLE V FLGH     DI VD
Sbjct: 19   FIDDILVYSKTREEHKEHLKVVLQTLKERQLYAKLSKCDFWLEEVSFLGHVISSGDIAVD 78

Query: 1033 PQKIEAVVE*ESTK 992
              K+EAV++ E+ K
Sbjct: 79   LSKVEAVLKWEAPK 92


>gb|EOY21357.1| RNA-directed DNA polymerase (Reverse transcriptase) [Theobroma cacao]
          Length = 239

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++      +    L+ VLQTLRE+QL+A  SKCEFWL+ V+FLGH      I VD
Sbjct: 69   FIDDILVYSKNDDEHAAHLLIVLQTLRERQLYAKFSKCEFWLKEVVFLGHVVSGAGIYVD 128

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P+KIEA+++ E  + VT
Sbjct: 129  PKKIEAILQWEQPRTVT 145


>gb|KYP39502.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 84

 Score = 65.5 bits (158), Expect = 9e-10
 Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++    R + +  L  VLQTL++K L+A  SKCEFWL+ V FLGH   +  I+VD
Sbjct: 16   FIDDILVYSKTREEHVEHLRIVLQTLKQKHLYAKFSKCEFWLDSVNFLGHVISEGGIVVD 75

Query: 1033 PQKIEAVVE 1007
            P K+EAV+E
Sbjct: 76   PAKVEAVLE 84


>gb|KYP42763.1| Retrovirus-related Pol polyprotein from transposon 297 family
            [Cajanus cajan]
          Length = 150

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYD-DDIIVD 1034
            FID  ++      +    L  VLQ L++KQL+A LSKCEFWLE V FLGH    D + VD
Sbjct: 16   FIDDILIYSQTHEEHEEHLQTVLQVLKDKQLYAKLSKCEFWLEEVKFLGHVISKDGVSVD 75

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P K+EAV+  E  K VT
Sbjct: 76   PSKVEAVLLWEPPKTVT 92


>gb|KYP53097.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 197

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYD-DDIIVD 1034
            FID  ++    R + +  L  VLQTL+EKQL+A LSKCEFWL+ V FLGH      I+VD
Sbjct: 16   FIDDILVYSKTREEHVEHLRIVLQTLKEKQLYAKLSKCEFWLDSVNFLGHVISKGGIVVD 75

Query: 1033 PQKIEAVVE*ESTKKV 986
            P K+EAV++  + K +
Sbjct: 76   PAKVEAVLDWRTPKSL 91


>gb|KYP39237.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 790

 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYD-DDIIVD 1034
            FID  ++    R +    L  VLQTL+EKQL+A LSKCEFWLE V FLGH      I+VD
Sbjct: 628  FIDDILVYSKTREEHAEHLRIVLQTLKEKQLYAKLSKCEFWLESVNFLGHVISKGGIVVD 687

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P K+EAV+E ++ K V+
Sbjct: 688  PAKVEAVLEWKAPKSVS 704


>emb|CAJ65807.1| polyprotein, partial [Citrus sinensis]
          Length = 533

 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYD-DDIIVD 1034
            F+D  ++    + +    L  +LQTLR+KQL+A  SKCEFWL+ V+FLGH    + I VD
Sbjct: 2    FVDDVLVYSRSQEEHEEHLRTILQTLRQKQLYAKFSKCEFWLDKVVFLGHVISAEGIYVD 61

Query: 1033 PQKIEAVVE*ESTKKVT 983
            PQKIEAVV  E    VT
Sbjct: 62   PQKIEAVVNWERPTNVT 78


>gb|KYP49089.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
          Length = 290

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++    R +    L  VLQTL+EKQL+A LSKCEFWL  V FLGH   +  I VD
Sbjct: 204  FIDDILVYSKTREEHAEHLRIVLQTLKEKQLYAKLSKCEFWLNSVSFLGHVISERGIAVD 263

Query: 1033 PQKIEAVVE*ESTKKV 986
            P K+EAV+E ++ K V
Sbjct: 264  PSKVEAVLEWKTPKSV 279


>gb|KYP32464.1| Retrovirus-related Pol polyprotein from transposon 17.6, partial
            [Cajanus cajan]
          Length = 968

 Score = 72.0 bits (175), Expect = 1e-09
 Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++    R +    L  VLQTLRE+QL+A LSKCEFWLE V FLGH      I VD
Sbjct: 614  FIDDILVYSKTREEHKEHLKVVLQTLRERQLYAKLSKCEFWLEEVSFLGHVISSGGIAVD 673

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P K+EAV++ E+ K V+
Sbjct: 674  PSKVEAVLKWEAPKSVS 690


>ref|XP_020205892.1| uncharacterized protein LOC109791051 [Cajanus cajan]
 gb|KYP35994.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 176

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYD-DDIIVD 1034
            FID  ++    R + +  L  VLQTL+EKQL+A LSKCEFWL+ V FLGH      I VD
Sbjct: 16   FIDDILVYSKTREEHVEHLRIVLQTLKEKQLYAKLSKCEFWLDSVNFLGHVISKGGIAVD 75

Query: 1033 PQKIEAVVE*ESTKKV 986
            P K+E V+E  + K V
Sbjct: 76   PAKVEVVLEWSTPKSV 91


>gb|EOY14212.1| Retrotransposon protein, Ty3-gypsy sub-class, putative [Theobroma
            cacao]
          Length = 284

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYD-DDIIVD 1034
            FID  ++      +    L  VLQTLRE+QL+A  SKCEFWL+ V+FLGH      I VD
Sbjct: 91   FIDDILVYSRDNDEHAAHLRIVLQTLRERQLYAKFSKCEFWLQEVVFLGHVVSRTGIYVD 150

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P+K+EA+++ E  K VT
Sbjct: 151  PKKVEAILQWEQPKTVT 167


>gb|KYP78070.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 154

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = -3

Query: 1147 VLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVDPQKIEAVVE*ESTKKVT 983
            VLQTLRE+QL+A LSKC+FWLE + FLGH      I+VDP K+E V++ E+ K V+
Sbjct: 7    VLQTLRERQLYAKLSKCDFWLEELSFLGHVISSGGIVVDPSKVEVVLKWETPKSVS 62


>gb|KYP59429.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 300

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++    + +    L  VLQTLRE+QL+A LSKC+FWLE V FLGHA     I VD
Sbjct: 103  FIDDILVYSKTKEEHAEHLKVVLQTLRERQLYAKLSKCDFWLEEVSFLGHAISSGGIAVD 162

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P K++AV++ E+ K V+
Sbjct: 163  PSKVDAVLKWETPKLVS 179


>gb|KYP31939.1| Retrovirus-related Pol polyprotein from transposon 297 family
            [Cajanus cajan]
          Length = 166

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYD-DDIIVD 1034
            FID  ++      +    L  VLQ L++KQL+A LSKCEFWLE V FLGH    D + VD
Sbjct: 16   FIDDILIYSRTHEEHEEHLQTVLQILKDKQLYAKLSKCEFWLEEVKFLGHVISKDGVSVD 75

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P K+EAV+  E  K VT
Sbjct: 76   PSKVEAVLLWEPPKTVT 92


>gb|KYP30913.1| Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
            cajan]
          Length = 138

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYDD-DIIVD 1034
            FID  ++    +++    L  VLQ LRE+QL+A LSKC+FWLE V FLGH      I VD
Sbjct: 16   FIDDILVYSKTKKEHKEHLKVVLQNLRERQLYAKLSKCDFWLEEVNFLGHVISSGGIAVD 75

Query: 1033 PQKIEAVVE*ESTKKVT 983
            P K+E V++ E+ K V+
Sbjct: 76   PSKVEMVLKWETPKSVS 92


>gb|KHN12505.1| Retrovirus-related Pol polyprotein from transposon 17.6, partial
            [Glycine soja]
          Length = 101

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = -3

Query: 1210 FIDIAILCHLQRRKALPMLIQVLQTLREKQLFATLSKCEFWLEHVIFLGHAYD-DDIIVD 1034
            FID  ++    R +    L  VLQTL++ +L+A LSKC+FWLE V FLGH      I VD
Sbjct: 19   FIDDILVYSKTREEHEEHLRVVLQTLKDNRLYAKLSKCDFWLEEVSFLGHVISKGGIAVD 78

Query: 1033 PQKIEAVVE*ESTKKV 986
            P K+EAV+  ES K V
Sbjct: 79   PSKVEAVMGWESPKSV 94