BLASTX nr result

ID: Rehmannia29_contig00030813 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00030813
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN15664.1| Spliceosome-associated coiled-coil protein [Handr...    59   1e-07

>gb|PIN15664.1| Spliceosome-associated coiled-coil protein [Handroanthus
           impetiginosus]
          Length = 252

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   EIETRIEELKSEAAGRNWNLEASIENGPFLHAEK 104
           EIETRI ELKSEAA R WNLEA+IENGP+ HAEK
Sbjct: 219 EIETRIGELKSEAAERGWNLEANIENGPYPHAEK 252


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