BLASTX nr result

ID: Rehmannia29_contig00030718 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00030718
         (768 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009380673.1| hypothetical protein AEK19_MT0281 (mitochond...    80   1e-15
emb|CDP57007.1| Cytochrome b6-f complex subunit, cytochrome b6 [...    59   5e-10
gb|OIT31379.1| pistil-specific extensin-like protein [Nicotiana ...    68   3e-09
gb|KHG09936.1| hypothetical protein F383_14565 [Gossypium arboreum]    57   2e-07

>ref|YP_009380673.1| hypothetical protein AEK19_MT0281 (mitochondrion) [Utricularia
           reniformis]
 gb|ART30557.1| hypothetical protein AEK19_MT0281 (mitochondrion) [Utricularia
           reniformis]
          Length = 77

 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
 Frame = -1

Query: 747 VCDLLELILLIVQRIGLSP**RWLYFVGYLFQYLEHELYELDK----EIFEL*FILNI*P 580
           +CDLLELILLIVQRIGLSP  RW YFVGY  +YLEHELYE++       ++   I+ I P
Sbjct: 1   MCDLLELILLIVQRIGLSPLYRWFYFVGYFVEYLEHELYEINSIKNYLNYDSYLIIIIRP 60

Query: 579 RVRTPKKISNYL 544
           RVR  K++SN L
Sbjct: 61  RVRITKRMSNCL 72


>emb|CDP57007.1| Cytochrome b6-f complex subunit, cytochrome b6 [Staphylococcus
           aureus subsp. aureus]
          Length = 267

 Score = 58.5 bits (140), Expect(2) = 5e-10
 Identities = 29/43 (67%), Positives = 31/43 (72%)
 Frame = -3

Query: 169 KIESKIKKFQTFYYVSDYYFIWVFLLELYEMKVSYTVLRGGLS 41
           K+  KIKKFQTFY +S     WVFL ELYEMK SYTVL GG S
Sbjct: 6   KLNEKIKKFQTFYSISVSANTWVFLFELYEMKFSYTVLGGGSS 48



 Score = 34.3 bits (77), Expect(2) = 5e-10
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -2

Query: 68  IYGSERGIVTYLNKVYDWFEER 3
           + G      TYLNKVYDWFEER
Sbjct: 42  VLGGGSSWFTYLNKVYDWFEER 63


>gb|OIT31379.1| pistil-specific extensin-like protein [Nicotiana attenuata]
          Length = 486

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 32/48 (66%), Positives = 39/48 (81%)
 Frame = -3

Query: 160 SKIKKFQTFYYVSDYYFIWVFLLELYEMKVSYTVLRGGLSPISIKSMI 17
           S++ KF+TFY +S    IWVFLLELYEMKVSYTVLRGG++PISI   +
Sbjct: 3   SELNKFKTFYSISVATSIWVFLLELYEMKVSYTVLRGGVTPISINPRV 50


>gb|KHG09936.1| hypothetical protein F383_14565 [Gossypium arboreum]
          Length = 39

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +3

Query: 657 INIRRSITISIKVTDLFSVLSIESILTSHTLIFRKYR 767
           + IRR  TISIK+TD FSVLSI SI+TSHTLIFRKYR
Sbjct: 1   MTIRRDKTISIKMTDPFSVLSIGSIITSHTLIFRKYR 37


Top