BLASTX nr result

ID: Rehmannia29_contig00030437 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00030437
         (714 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020550444.1| translocase of chloroplast 159, chloroplasti...    65   2e-08
gb|PIN06682.1| Small monomeric GTPase [Handroanthus impetiginosus]     63   1e-07

>ref|XP_020550444.1| translocase of chloroplast 159, chloroplastic, partial [Sesamum
           indicum]
          Length = 1202

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 66/205 (32%), Positives = 87/205 (42%), Gaps = 75/205 (36%)
 Frame = +2

Query: 323 DSVVDAINVDVAIPGLTVVGEKEENEGHTIEGDGVPLESVGGADESSD---------SVG 475
           DSVVD I V +  PG+ VVGE +EN G  IEG  VPL+ VGG+ ES +          VG
Sbjct: 156 DSVVDTIQVGMVGPGVAVVGETQEN-GGKIEGVEVPLQLVGGSTESGNGVNEEVSTREVG 214

Query: 476 IDYRSYDDTGDVKKPEVEIEVNEIEG-LNGDENG-------------------------E 577
            D  S++   +  K  +E +  E E  + GDENG                         E
Sbjct: 215 ADNPSFEPAAESSKDVLESKTLEPEHYVVGDENGEKSDAGTVVDLVNGVHKSLKSNDSIE 274

Query: 578 NQTSDE-HT----GIYPQQIKEDEVDNE-----------------VDSMSDG-------- 667
           N T+D+ HT    G+  + +  D   N+                 V + +DG        
Sbjct: 275 NGTTDKIHTDGEVGLVDETVAADRDVNQLYASDAGTVQTNGVHGGVPAQNDGLADRMDEE 334

Query: 668 ----------DTDGMIFGSSEAARK 712
                     DTDGMIFGSSEAA+K
Sbjct: 335 VHPEDSMSDEDTDGMIFGSSEAAKK 359


>gb|PIN06682.1| Small monomeric GTPase [Handroanthus impetiginosus]
          Length = 1418

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 42/91 (46%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = +2

Query: 308 SKLEKDSVVDAINVDVAIPGLTVVGEKEENEGHTIEGDGVPLESVGGADESSDSVGIDYR 487
           S  E DSVVD I VD   PG+ VVGE +EN G  +EG  VPL SVGGA ES D V  +  
Sbjct: 335 SSPEVDSVVDTIQVDKVGPGVAVVGEMDENGGGEVEGVEVPLVSVGGATESGDIVNEEVG 394

Query: 488 SYD-DTGDVKKPEVEIEVNEIEGLNGDENGE 577
           + +   GD+    VE +  + E + GDE  E
Sbjct: 395 AREVGEGDI----VESKPLQPEHVVGDEKDE 421


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