BLASTX nr result

ID: Rehmannia29_contig00030404 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00030404
         (610 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019705202.1| PREDICTED: uncharacterized protein LOC105041...    84   5e-16
ref|XP_019705199.1| PREDICTED: uncharacterized protein LOC105041...    84   1e-15
ref|XP_010916531.1| PREDICTED: uncharacterized protein LOC105041...    83   2e-15

>ref|XP_019705202.1| PREDICTED: uncharacterized protein LOC105041311 isoform X3 [Elaeis
           guineensis]
          Length = 243

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 40/114 (35%), Positives = 70/114 (61%)
 Frame = -3

Query: 452 STHNLIVHFGDEVWKERDFTEDSCFLDILNICQKFIDIYSVGFKITDGDGRPLRNDKDVM 273
           ++H L VH+G++V +E +F +DS +LD+L +C+K  DIYSVGFK+  G+ + L +D  VM
Sbjct: 5   NSHILFVHYGEKVCQESNFGDDSIYLDVLAVCKKLCDIYSVGFKLYYGNRKILSDDNSVM 64

Query: 272 VMLENHENVETMHIYVDLDETSGPVPFKMPQDIPEFGNPRVPEVSDVMISGEYK 111
            ML   + +  +++Y+  DE + P P+ +P       N  +  V+++   G+ K
Sbjct: 65  QMLHEFQGMRDIYVYMKNDEKARPCPYILPN-----SNGVIFSVTNIQNHGDLK 113


>ref|XP_019705199.1| PREDICTED: uncharacterized protein LOC105041311 isoform X1 [Elaeis
           guineensis]
 ref|XP_019705200.1| PREDICTED: uncharacterized protein LOC105041311 isoform X1 [Elaeis
           guineensis]
 ref|XP_019705201.1| PREDICTED: uncharacterized protein LOC105041311 isoform X1 [Elaeis
           guineensis]
          Length = 306

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 40/114 (35%), Positives = 70/114 (61%)
 Frame = -3

Query: 452 STHNLIVHFGDEVWKERDFTEDSCFLDILNICQKFIDIYSVGFKITDGDGRPLRNDKDVM 273
           ++H L VH+G++V +E +F +DS +LD+L +C+K  DIYSVGFK+  G+ + L +D  VM
Sbjct: 5   NSHILFVHYGEKVCQESNFGDDSIYLDVLAVCKKLCDIYSVGFKLYYGNRKILSDDNSVM 64

Query: 272 VMLENHENVETMHIYVDLDETSGPVPFKMPQDIPEFGNPRVPEVSDVMISGEYK 111
            ML   + +  +++Y+  DE + P P+ +P       N  +  V+++   G+ K
Sbjct: 65  QMLHEFQGMRDIYVYMKNDEKARPCPYILPN-----SNGVIFSVTNIQNHGDLK 113


>ref|XP_010916531.1| PREDICTED: uncharacterized protein LOC105041311 isoform X2 [Elaeis
           guineensis]
          Length = 302

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 36/90 (40%), Positives = 61/90 (67%)
 Frame = -3

Query: 452 STHNLIVHFGDEVWKERDFTEDSCFLDILNICQKFIDIYSVGFKITDGDGRPLRNDKDVM 273
           ++H L VH+G++V +E +F +DS +LD+L +C+K  DIYSVGFK+  G+ + L +D  VM
Sbjct: 5   NSHILFVHYGEKVCQESNFGDDSIYLDVLAVCKKLCDIYSVGFKLYYGNRKILSDDNSVM 64

Query: 272 VMLENHENVETMHIYVDLDETSGPVPFKMP 183
            ML   + +  +++Y+  DE + P P+ +P
Sbjct: 65  QMLHEFQGMRDIYVYMKNDEKARPCPYILP 94


Top