BLASTX nr result
ID: Rehmannia29_contig00030182
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00030182
(1040 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207... 301 6e-89
gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica] 279 2e-81
gb|KYP68472.1| Retrovirus-related Pol polyprotein from transposo... 268 2e-80
gb|AMY96445.1| gag/pol protein [Momordica dioica] 269 1e-77
gb|KYP31134.1| Retrovirus-related Pol polyprotein from transposo... 259 7e-76
ref|XP_022895257.1| uncharacterized protein LOC111409440 [Olea e... 234 2e-72
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 226 9e-63
gb|ABF96044.1| transposon protein, putative, unclassified [Oryza... 226 1e-62
emb|CAE03910.2| OSJNBb0015G09.4 [Oryza sativa Japonica Group] 226 2e-62
gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc... 225 2e-62
gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group] 224 4e-62
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group] 224 4e-62
emb|CAH67504.1| OSIGBa0134H18.6 [Oryza sativa] 224 6e-62
gb|AAS98437.1| putative polyprotein [Oryza sativa Japonica Group] 224 8e-62
gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sa... 224 9e-62
gb|AAP53325.2| retrotransposon protein, putative, Ty1-copia subc... 224 9e-62
gb|KYP36562.1| Retrovirus-related Pol polyprotein from transposo... 221 3e-61
gb|KYP61429.1| Retrovirus-related Pol polyprotein from transposo... 218 3e-61
gb|ABF94883.1| transposon protein, putative, unclassified [Oryza... 221 7e-61
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group] 221 7e-61
>ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
carota subsp. sativus]
Length = 3860
Score = 301 bits (772), Expect = 6e-89
Identities = 163/345 (47%), Positives = 210/345 (60%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI SQL+APGTPQQNGV+ERRNRTLL+ VRSM+ +S L SF G+A++TA YLLN+V SK
Sbjct: 734 GIESQLTAPGTPQQNGVAERRNRTLLESVRSMMSYSDLPKSFWGHALETAAYLLNLVPSK 793
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCS 361
SVPKTPLELW G KP+LRHIRIWGCPAHVL K+ESR+EV +F+GYP GT+GY F S
Sbjct: 794 SVPKTPLELWTGDKPSLRHIRIWGCPAHVLNKNATKLESRTEVKLFVGYPMGTKGYLFYS 853
Query: 362 PQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXX 541
P+D+ V VSTNA FLE+ YI + S ++LEE+ + + ++
Sbjct: 854 PKDRDVTVSTNARFLEEDYIMNHKPMSSIVLEELVGGTNNEPVVQV-------------- 899
Query: 542 LVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXX 721
+QT P V +P+P G
Sbjct: 900 ----EQPQQTVQP--VTNTAPVPRRSG--------------------------------- 920
Query: 722 XXXXXXVRRSGRVIRPPSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSE 901
RV+R P R++ GES + VS E ++DP +Y+EA++D D W+ AMDSE
Sbjct: 921 -----------RVVRQPDRFMFLGESSDLVSGEHDDDPRTYEEAIQDKDASLWQKAMDSE 969
Query: 902 MKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
M+SMY+ V +LV+ P GVKPIGCKWVYK+KRG D KV+ +KARL
Sbjct: 970 MESMYSNQVWELVEPPKGVKPIGCKWVYKKKRGSDKKVKAWKARL 1014
Score = 301 bits (772), Expect = 6e-89
Identities = 163/345 (47%), Positives = 210/345 (60%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI SQL+APGTPQQNGV+ERRNRTLL+ VRSM+ +S L SF G+A++TA YLLN+V SK
Sbjct: 1949 GIESQLTAPGTPQQNGVAERRNRTLLESVRSMMSYSDLPKSFWGHALETAAYLLNLVPSK 2008
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCS 361
SVPKTPLELW G KP+LRHIRIWGCPAHVL K+ESR+EV +F+GYP GT+GY F S
Sbjct: 2009 SVPKTPLELWTGDKPSLRHIRIWGCPAHVLNKNATKLESRTEVKLFVGYPMGTKGYLFYS 2068
Query: 362 PQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXX 541
P+D+ V VSTNA FLE+ YI + S ++LEE+ + + ++
Sbjct: 2069 PKDRDVTVSTNARFLEEDYIMNHKPMSSIVLEELVGGTNNEPVVQV-------------- 2114
Query: 542 LVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXX 721
+QT P V +P+P G
Sbjct: 2115 ----EQPQQTVQP--VTNTAPVPRRSG--------------------------------- 2135
Query: 722 XXXXXXVRRSGRVIRPPSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSE 901
RV+R P R++ GES + VS E ++DP +Y+EA++D D W+ AMDSE
Sbjct: 2136 -----------RVVRQPDRFMFLGESSDLVSGEHDDDPRTYEEAIQDKDASLWQKAMDSE 2184
Query: 902 MKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
M+SMY+ V +LV+ P GVKPIGCKWVYK+KRG D KV+ +KARL
Sbjct: 2185 MESMYSNQVWELVEPPKGVKPIGCKWVYKKKRGSDKKVKAWKARL 2229
Score = 301 bits (772), Expect = 6e-89
Identities = 163/345 (47%), Positives = 210/345 (60%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI SQL+APGTPQQNGV+ERRNRTLL+ VRSM+ +S L SF G+A++TA YLLN+V SK
Sbjct: 3164 GIESQLTAPGTPQQNGVAERRNRTLLESVRSMMSYSDLPKSFWGHALETAAYLLNLVPSK 3223
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCS 361
SVPKTPLELW G KP+LRHIRIWGCPAHVL K+ESR+EV +F+GYP GT+GY F S
Sbjct: 3224 SVPKTPLELWTGDKPSLRHIRIWGCPAHVLNKNATKLESRTEVKLFVGYPMGTKGYLFYS 3283
Query: 362 PQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXX 541
P+D+ V VSTNA FLE+ YI + S ++LEE+ + + ++
Sbjct: 3284 PKDRDVTVSTNARFLEEDYIMNHKPMSSIVLEELVGGTNNEPVVQV-------------- 3329
Query: 542 LVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXX 721
+QT P V +P+P G
Sbjct: 3330 ----EQPQQTVQP--VTNTAPVPRRSG--------------------------------- 3350
Query: 722 XXXXXXVRRSGRVIRPPSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSE 901
RV+R P R++ GES + VS E ++DP +Y+EA++D D W+ AMDSE
Sbjct: 3351 -----------RVVRQPDRFMFLGESSDLVSGEHDDDPRTYEEAIQDKDASLWQKAMDSE 3399
Query: 902 MKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
M+SMY+ V +LV+ P GVKPIGCKWVYK+KRG D KV+ +KARL
Sbjct: 3400 MESMYSNQVWELVEPPKGVKPIGCKWVYKKKRGSDKKVKAWKARL 3444
>gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]
Length = 1292
Score = 279 bits (714), Expect = 2e-81
Identities = 162/345 (46%), Positives = 204/345 (59%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI SQLSAP TPQQNGVSERRNRTLLDMVRSM+ ++ L SF GYA++TA+++LN V SK
Sbjct: 588 GIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSK 647
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCS 361
SV +TP ELW GRK +LR+ RIWGCPAHVL +K+E RS++C+F+GYPK +RG F
Sbjct: 648 SVLETPYELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYH 707
Query: 362 PQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXX 541
PQ+ KVFVSTNATFLE+ + R + P S I
Sbjct: 708 PQENKVFVSTNATFLEE--------------DHXRNHQPRSKI----------------- 736
Query: 542 LVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXX 721
V + P+ T+ +V A ++ H QEL
Sbjct: 737 -VLKEMFKNATDKPSSSTK------------VVDK---ANISDQSHTSQEL--------- 771
Query: 722 XXXXXXVRRSGRVIRPPSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSE 901
RRSGRV+ P+RYL E+ + + EDP +YK+AM D+D D W AM+ E
Sbjct: 772 ----RVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLE 827
Query: 902 MKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
M+SMY SV LVDLP+ VKPIGCKW+YKRKR GKV+T+KARL
Sbjct: 828 MESMYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARL 872
>gb|KYP68472.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 676
Score = 268 bits (684), Expect = 2e-80
Identities = 152/347 (43%), Positives = 206/347 (59%), Gaps = 2/347 (0%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GILSQ + PGTPQ NGVSERRNRTLLDMVRSM+GF+ L + GYA++++ YLLN V +K
Sbjct: 84 GILSQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPINLWGYALESSAYLLNKVPTK 143
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCS 361
S+ TP E+W GRKPNL+HI++WGC A+V K +++K+E+RS+ C FIGYPK T Y+F
Sbjct: 144 SLSTTPYEIWKGRKPNLKHIKVWGCHAYVKKLQIDKLEARSQKCRFIGYPKETMRYYFFH 203
Query: 362 PQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXX 541
P D KVFV+ ATFLE ++ E ++ L+E++E +++ E
Sbjct: 204 PFDHKVFVARGATFLEREFLAEGCHGKEIDLDEIQEASETTNAQEHEMENEQPFFDVLKL 263
Query: 542 LVA-GSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXX 718
+ SS E P V + P +E D+ P+ NE R+ +
Sbjct: 264 MQRLPSSTNLVEEPTIVQEQVNEPTLEQDQQPL----------NEVQRDCTI-------- 305
Query: 719 XXXXXXXVRRSGRVIRPPSRY-LLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMD 895
+RRS R R P+R LL + ++DP SY+EA+ +D + WR AM+
Sbjct: 306 ----QVPLRRSSREHRAPNRLNLLVHDDTTYEVDHSDDDPNSYEEAIRSLDHEKWREAME 361
Query: 896 SEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
SEM+SM V LV+ +KPIGCKWVYK+K G DGKVETYKARL
Sbjct: 362 SEMESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARL 408
>gb|AMY96445.1| gag/pol protein [Momordica dioica]
Length = 1313
Score = 269 bits (687), Expect = 1e-77
Identities = 154/345 (44%), Positives = 198/345 (57%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI+SQLSAPGTPQ NGVSERRNRTLLDMVRSM+ ++ L SF GYA + +LN V SK
Sbjct: 595 GIVSQLSAPGTPQCNGVSERRNRTLLDMVRSMMSYADLPDSFWGYARERERAILNRVPSK 654
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCS 361
SV +TP ELW GRK +L ++IWGCPAHV K + +K+E RSE C+F+GYPK TRGY+F
Sbjct: 655 SVEETPYELWYGRKSSLSFLKIWGCPAHVKKLQPKKLEPRSEKCLFVGYPKETRGYYFYH 714
Query: 362 PQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXX 541
PQ+ KVFV+TN FLE ++ + SK++L+ + E
Sbjct: 715 PQENKVFVATNEAFLEKEFLSRHQPGSKIVLKAVVE------------------------ 750
Query: 542 LVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXX 721
P +P +V + + + D++ +QEL
Sbjct: 751 -------------PLIPLDGTDKPSSSTKVVVDKAEVN-DDQSHTPDQQEL--------- 787
Query: 722 XXXXXXVRRSGRVIRPPSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSE 901
RRSGR R P+RYL E+ + EEDPT+YK+AM D D W AM+SE
Sbjct: 788 ----RVPRRSGRSRRAPNRYLGLVETQIMILDNGEEDPTNYKQAMVGPDSDQWLKAMNSE 843
Query: 902 MKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
M+SMY V LVDLP+ VKPIGCKW+YK+KR D V +KARL
Sbjct: 844 MESMYDNKVWTLVDLPSDVKPIGCKWIYKKKRDQDSNVTVFKARL 888
>gb|KYP31134.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 830
Score = 259 bits (661), Expect = 7e-76
Identities = 150/347 (43%), Positives = 200/347 (57%), Gaps = 2/347 (0%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GILSQ PGTPQ NGVSERRNRTLLDMV+SM+GF+ L + GYA++++ YLLN V +K
Sbjct: 356 GILSQWKPPGTPQHNGVSERRNRTLLDMVKSMMGFTDLPINLWGYALESSAYLLNKVPTK 415
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCS 361
S+ TP E+W GRKPNL+HI++WGC A + K+E+RS+ C FIGYPK T GY+F
Sbjct: 416 SLSTTPYEIWKGRKPNLKHIKVWGCHALL----RNKLEARSQKCRFIGYPKETMGYYFFH 471
Query: 362 PQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXX 541
P D KVFV+ ATFLE ++ E ++ L+E++E +++ E
Sbjct: 472 PSDHKVFVARGATFLEREFLAEGCHGKEIDLDEIQEASETTNAQEHEMENEQPFFDVLKL 531
Query: 542 LVA-GSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXX 718
SS E P V + P +E D+ P+ NE R+ +
Sbjct: 532 TQRLPSSTNLVEEPTIVQEQVNEPTLEQDQQPL----------NEVQRDCTI-------- 573
Query: 719 XXXXXXXVRRSGRVIRPPSRY-LLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRSAMD 895
+RRS R R P+R LL + ++DP SY+EA+ +D + WR AM+
Sbjct: 574 ----QVPLRRSSREHRAPNRLNLLVHDDTTYEVDHNDDDPNSYEEAIRSLDHEKWREAME 629
Query: 896 SEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
SEM+SM V LV+ +KPIGCKWVYK+K G DGKVETYKARL
Sbjct: 630 SEMESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARL 676
>ref|XP_022895257.1| uncharacterized protein LOC111409440 [Olea europaea var.
sylvestris]
Length = 260
Score = 234 bits (598), Expect = 2e-72
Identities = 140/296 (47%), Positives = 177/296 (59%)
Frame = +2
Query: 83 MVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSKSVPKTPLELWNGRKPNLRHIRIWGCPA 262
MVR M+ F + LN+V SKSVPKT LELWNGRK +L +I+IWGCPA
Sbjct: 1 MVRLMMSLQLYLCHFGDMHWKHQHTFLNLVPSKSVPKTLLELWNGRKLSLHYIQIWGCPA 60
Query: 263 HVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCSPQDKKVFVSTNATFLEDRYIEECESKS 442
HVLKGK EK+ES+SE+C+F+ YPKGTRGY+F SP D+KVFVSTNATFLED+YI E + KS
Sbjct: 61 HVLKGKTEKLESKSEICLFVRYPKGTRGYYFYSPLDRKVFVSTNATFLEDKYINEHQFKS 120
Query: 443 KVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXXLVAGSSGRQTEAPPTVPTRSPIPEMEG 622
KV+LEEM + +SSIPE + S RQ P IP+
Sbjct: 121 KVVLEEMSGSNSTSSIPETQ-----------------SHNRQ-------PLVLDIPK--- 153
Query: 623 DRVPIVQTPLGAKDENEEHREQELVGXXXXXXXXXXXXXVRRSGRVIRPPSRYLLYGESF 802
Q L +DE+ +Q V +R+S RVIRPP YLL GES
Sbjct: 154 ------QCVLSGRDESSNSMDQVNV-----EGIEEDPPSLRQSQRVIRPPFMYLLVGESN 202
Query: 803 EAVSTEQEEDPTSYKEAMEDIDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIG 970
+ +ST Q +D TSYKEAM D+D D + A+++EM+SM++ V LVD P G+K IG
Sbjct: 203 KVISTAQVDDLTSYKEAMNDVDADLSQQAINTEMESMHSNQVWKLVDAPEGIKHIG 258
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 226 bits (577), Expect = 9e-63
Identities = 134/350 (38%), Positives = 190/350 (54%), Gaps = 5/350 (1%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI+SQL+ P TPQ NGV+ERRNRTLLDMVRSM+ ++L F GYA++TA ++LN+V +K
Sbjct: 558 GIVSQLTPPRTPQLNGVAERRNRTLLDMVRSMMSRASLPIHFWGYALETAAHILNLVPTK 617
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAHVLKGKMEKMESRSEVCIFIGYPKGTRGYHFCS 361
V KTP E+W G+ P+L HI++WGC A V + +K+ RSE C F+GYPK + GY F
Sbjct: 618 KVAKTPHEMWTGKVPSLAHIKVWGCEAFVRRETQDKLAERSERCFFLGYPKQSFGYLFYR 677
Query: 362 PQDKKVFVSTNATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXXXXX 541
P + VFV+ A F E I + +S S + LEE++E+ +++ E
Sbjct: 678 PSEDVVFVARRAVFRERELIFKEDSGSTIDLEEIQESSDDATLGE--------------- 722
Query: 542 LVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXXXXX 721
+S + E P PT +P
Sbjct: 723 ----TSNQHEEEVPVGPTDVSLP------------------------------------- 741
Query: 722 XXXXXXVRRSGRVIRPPSRYLLY----GESFEAVST-EQEEDPTSYKEAMEDIDVDHWRS 886
+RRSGRV PP Y + G++F + T ++P +Y+EA+ + W+
Sbjct: 742 ------LRRSGRVSMPPEFYGFHITSDGDTFVSDRTLINLDEPANYQEAVAGPESAKWKE 795
Query: 887 AMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
AMDSE+KSMY V +LVD G K +GCKW++K+K +DGKV T+KARL
Sbjct: 796 AMDSEIKSMYDNQVWNLVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARL 845
>gb|ABF96044.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1395
Score = 226 bits (576), Expect = 1e-62
Identities = 142/358 (39%), Positives = 187/358 (52%), Gaps = 13/358 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 600 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 659
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPKTP ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 660 SVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 719
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 720 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSL 772
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ 688
+V + AP P P+ M P++Q T + A E E + Q
Sbjct: 773 PADVVPAMPVIEVPAPVVTP---PVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPV 829
Query: 689 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMED 862
+ RRS RV R R Y +Y + E+DPTSY+EAM
Sbjct: 830 QETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVY----NIEESHMEDDPTSYEEAMRS 885
Query: 863 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EMKSM V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 886 ARSSEWLEAMKDEMKSMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 943
>emb|CAE03910.2| OSJNBb0015G09.4 [Oryza sativa Japonica Group]
Length = 1393
Score = 226 bits (575), Expect = 2e-62
Identities = 142/358 (39%), Positives = 187/358 (52%), Gaps = 13/358 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 610 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 669
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCP--AHVLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPKTP ELW GR P+L H+R+WG P A V + K++ ++ C FIGYP+ ++GY F
Sbjct: 670 SVPKTPYELWTGRVPSLTHLRVWGSPTEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 729
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 730 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSL 782
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ 688
+V + AP P P+ M P++Q T + A E E + Q
Sbjct: 783 PADVVPAMPVIEVPAPVVTP---PVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPV 839
Query: 689 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMED 862
+ RRS RV R R Y +Y + E+DPTSY+EAM
Sbjct: 840 QETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVY----NIEESHMEDDPTSYEEAMRS 895
Query: 863 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EMKSM V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 896 ARSSEWLEAMKDEMKSMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 953
>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 225 bits (574), Expect = 2e-62
Identities = 145/357 (40%), Positives = 188/357 (52%), Gaps = 12/357 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI +Q SAPG PQQNGV+ERRNRTL+DMVRSML STL A++TA ++LN + SK
Sbjct: 619 GIKAQYSAPGEPQQNGVAERRNRTLMDMVRSMLSHSTLPVKLWMEALKTATHILNRIPSK 678
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCP--AHVLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPKTP ELW G+KP L + +WGCP A V M K++ ++ C FIGYP ++ Y F
Sbjct: 679 SVPKTPFELWTGKKPTLNYFHVWGCPAEARVFNPNMGKLDLKTISCHFIGYPDKSKAYRF 738
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P F+ T +A FLE+ I+ + +V+LEE R +P +P I+
Sbjct: 739 YCPNQFTKFIETRHAVFLENDIIKGSMTPREVVLEEKRNYVP---MPIIKEPVFSTHTHV 795
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXX 712
+ + EAP T T S I + DEN E +Q +
Sbjct: 796 TPSIERHNDATPAEAPAT--TSSSI----------------SNDENNEDAQQPQI----- 832
Query: 713 XXXXXXXXXVRRSGRVIRP--PSRYLLY--GESFEAVSTEQEE-----DPTSYKEAMEDI 865
VRRS RV + PS Y+ Y E E +S E E DP S+KEAM+
Sbjct: 833 VIDEQNNEPVRRSQRVRKSAIPSDYITYMNEEVNEPMSEEVNEPILDNDPISFKEAMKGE 892
Query: 866 DVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EMKSM T V DLV++P G K +GCKWVYK KR G ++ +K RL
Sbjct: 893 HSSEWLKAMKDEMKSMSTNKVWDLVEIPEGAKTVGCKWVYKTKRDPKGNIKRFKVRL 949
>gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1358
Score = 224 bits (572), Expect = 4e-62
Identities = 141/358 (39%), Positives = 187/358 (52%), Gaps = 13/358 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 563 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 622
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPKTP ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 623 SVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 682
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 683 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSL 735
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ 688
+V + AP P P+ M P++Q T + A E E + Q
Sbjct: 736 PADVVPAMPVIEVPAPVVTP---PVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPV 792
Query: 689 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMED 862
+ RRS RV R R Y +Y + E+DPTSY+EAM
Sbjct: 793 QETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVY----NIEESHMEDDPTSYEEAMRS 848
Query: 863 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EM+SM V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 849 ARSSEWLEAMKDEMESMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 906
>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
Length = 1405
Score = 224 bits (572), Expect = 4e-62
Identities = 141/358 (39%), Positives = 187/358 (52%), Gaps = 13/358 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 610 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 669
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPKTP ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 670 SVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 729
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 730 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSL 782
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ 688
+V + AP P P+ M P++Q T + A E E + Q
Sbjct: 783 PADVVPAMPVIEVPAPVVTP---PVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPV 839
Query: 689 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMED 862
+ RRS RV R R Y +Y + E+DPTSY+EAM
Sbjct: 840 QETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVY----NIEESHMEDDPTSYEEAMRS 895
Query: 863 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EM+SM V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 896 ARSSEWLEAMKDEMESMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 953
>emb|CAH67504.1| OSIGBa0134H18.6 [Oryza sativa]
Length = 1261
Score = 224 bits (571), Expect = 6e-62
Identities = 141/358 (39%), Positives = 186/358 (51%), Gaps = 13/358 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 466 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 525
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPK P ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 526 SVPKAPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 585
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 586 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPTPSTQE-------PFFSL 638
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ 688
+V + AP P P+ M P++Q T + A E E + Q
Sbjct: 639 PADVVPAMPVIEVPAPVVTP---PVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPI 695
Query: 689 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMED 862
+ RRS RV R R Y +Y + E+DPTSY+EAM
Sbjct: 696 QETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVY----NIEESHMEDDPTSYEEAMRS 751
Query: 863 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EMKSM V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 752 ARSSEWLEAMKDEMKSMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 809
>gb|AAS98437.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1362
Score = 224 bits (570), Expect = 8e-62
Identities = 139/358 (38%), Positives = 185/358 (51%), Gaps = 13/358 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+D+VRSM+ +STL A++TA+++LN V SK
Sbjct: 567 GIVAQYSTPGEPQQNGVAERRNRTLMDIVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 626
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPKTP ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 627 SVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 686
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 687 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQE-------PFFSL 739
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVG---- 700
+V + AP P P+ M P++Q EE +Q +
Sbjct: 740 PADVVPAMPVIEVPAPVVTP---PVATMNESEEPVIQDSTEMVVTPEEELQQPQIDNVPV 796
Query: 701 ----XXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMED 862
RRS RV R R Y +Y + E+DPTSY+EAM
Sbjct: 797 QETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVY----NIEESHMEDDPTSYEEAMRS 852
Query: 863 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EMKSM +V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 853 ARSSEWLEAMKDEMKSMKLNNVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 910
>gb|AAM18738.1|AC092548_16 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1787
Score = 224 bits (570), Expect = 9e-62
Identities = 140/359 (38%), Positives = 191/359 (53%), Gaps = 14/359 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 485 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 544
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
S+PKTP ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 545 SMPKTPYELWTGRVPSLAHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 604
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 605 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPA 664
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ 688
+ + P V T SP+ M + P++Q T + A E E + Q
Sbjct: 665 IPVI---------DVPAPVVT-SPVATMNENEEPVIQDSTEMVATPEEELQQPQIDNVPV 714
Query: 689 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSRYLLYGESFEAVSTEQ---EEDPTSYKEAME 859
+ RRS RV R R + ++ + E+ E+DPTSY+EAM
Sbjct: 715 QETQQEPQVQDVPNVQAPRRSERVKRSAIR-----DDYKVYNIEELHMEDDPTSYEEAMR 769
Query: 860 DIDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EMKSM +V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 770 SARSSEWLEAMKDEMKSMKLNNVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 828
>gb|AAP53325.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1884
Score = 224 bits (570), Expect = 9e-62
Identities = 140/359 (38%), Positives = 191/359 (53%), Gaps = 14/359 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 485 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 544
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
S+PKTP ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 545 SMPKTPYELWTGRVPSLAHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 604
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 605 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPA 664
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ 688
+ + P V T SP+ M + P++Q T + A E E + Q
Sbjct: 665 IPVI---------DVPAPVVT-SPVATMNENEEPVIQDSTEMVATPEEELQQPQIDNVPV 714
Query: 689 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSRYLLYGESFEAVSTEQ---EEDPTSYKEAME 859
+ RRS RV R R + ++ + E+ E+DPTSY+EAM
Sbjct: 715 QETQQEPQVQDVPNVQAPRRSERVKRSAIR-----DDYKVYNIEELHMEDDPTSYEEAMR 769
Query: 860 DIDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W AM EMKSM +V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 770 SARSSEWLEAMKDEMKSMKLNNVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 828
>gb|KYP36562.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 936
Score = 221 bits (562), Expect = 3e-61
Identities = 136/350 (38%), Positives = 188/350 (53%), Gaps = 5/350 (1%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI +Q + PGTPQQNGVSERRNRTL+DMVRSML STL YA++TA+YLLN V SK
Sbjct: 518 GICAQYTMPGTPQQNGVSERRNRTLMDMVRSMLSNSTLPIYLWMYALKTAMYLLNRVPSK 577
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPA--HVLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
+V KTP ELW GR P+LRH+ +WGC A + + +K+++R+ FIGYP+ ++GY F
Sbjct: 578 AVSKTPFELWTGRTPSLRHLHVWGCQAEIRIYNPQEKKLDARTISGYFIGYPEKSKGYMF 637
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P V T NA F+E+ + KV ++E+R +P
Sbjct: 638 YCPNHNMRIVETGNARFIENGEVSGSTIPQKVEVKEVRMQVP------------------ 679
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXX 712
+ +SG + P TV + + E + I P+ + QE+
Sbjct: 680 ----LTYASGNKVSVPLTVESNNNEEEQHNNEPMIHNEPI-------VEQPQEIA----- 723
Query: 713 XXXXXXXXXVRRSGRVIRP--PSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRS 886
+RRS R RP + Y++Y E S+ E DP S+ +A+ + + W +
Sbjct: 724 ---------LRRSQREKRPAISNDYMVYLHELENDSSINENDPVSFSQAVSCDNSEKWLN 774
Query: 887 AMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
AM E+KSM V DLV+LP G K +GCKWV+K KR DG +E YKARL
Sbjct: 775 AMKEELKSMEQNDVWDLVELPEGCKRVGCKWVFKTKRDSDGNLERYKARL 824
>gb|KYP61429.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 736
Score = 218 bits (555), Expect = 3e-61
Identities = 134/350 (38%), Positives = 187/350 (53%), Gaps = 5/350 (1%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI +Q + PGTPQQNGVSERRNRTL+DMVRSML STL YA++TA+YLLN V SK
Sbjct: 399 GICAQYTMPGTPQQNGVSERRNRTLMDMVRSMLSNSTLPIYLWMYALKTAMYLLNRVPSK 458
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPA--HVLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
+V KTP ELW GR P+LRH+ +WGC A + + +K+++R+ FIGYP+ ++GY F
Sbjct: 459 AVSKTPFELWTGRTPSLRHLHVWGCQAEIRIYNPQEKKLDARTISGYFIGYPEKSKGYMF 518
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P V T NA F+E+ + KV ++E+R +P
Sbjct: 519 YCPNHNMRIVETGNARFIENGEVSGSTIPQKVEVKEVRMQVP------------------ 560
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXX 712
+ +SG + P TV + + E + I P+ + QE+
Sbjct: 561 ----LTYASGNKVSVPLTVESNNNEEEQHNNEPMIHNEPI-------VEQPQEIA----- 604
Query: 713 XXXXXXXXXVRRSGRVIRP--PSRYLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRS 886
+RRS R RP + Y++Y E S+ E DP S+ +A+ + + W +
Sbjct: 605 ---------LRRSQREKRPAISNDYMVYLHELETDSSINENDPVSFSQAVSCDNSEKWLN 655
Query: 887 AMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
AM E+KSM V DLV+L G K +GCKW++K KR DG +E YKARL
Sbjct: 656 AMKDELKSMEQNDVWDLVELLEGCKRVGCKWIFKTKRDFDGNLERYKARL 705
>gb|ABF94883.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1390
Score = 221 bits (563), Expect = 7e-61
Identities = 137/350 (39%), Positives = 182/350 (52%), Gaps = 5/350 (1%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 605 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 664
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPKTP ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 665 SVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 724
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 725 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPA 784
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQTPLGAKDENEEHREQELVGXXXX 712
+ + + PE E + I P+ E H+E ++
Sbjct: 785 MPVIEVPMNESEEPVIQDSTEMVATPEEELQQPQIDNVPV-----QETHQEPQVQDVPNV 839
Query: 713 XXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMEDIDVDHWRS 886
RRS RV R R Y +Y + E+DPTSY+EAM W
Sbjct: 840 QAP-------RRSERVRRSAIRDDYKVYNIE----ESHMEDDPTSYEEAMRSARSSEWLE 888
Query: 887 AMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
AM EMKSM V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 889 AMKDEMKSMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 938
>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
Length = 1405
Score = 221 bits (563), Expect = 7e-61
Identities = 140/358 (39%), Positives = 186/358 (51%), Gaps = 13/358 (3%)
Frame = +2
Query: 2 GILSQLSAPGTPQQNGVSERRNRTLLDMVRSMLGFSTLATSFCGYAIQTAVYLLNMVLSK 181
GI++Q S PG PQQNGV+ERRNRTL+DMVRSM+ +STL A++TA+++LN V SK
Sbjct: 610 GIVAQYSTPGEPQQNGVAERRNRTLMDMVRSMMSYSTLPLGLWMEALKTAIHILNRVPSK 669
Query: 182 SVPKTPLELWNGRKPNLRHIRIWGCPAH--VLKGKMEKMESRSEVCIFIGYPKGTRGYHF 355
SVPKTP ELW GR P+L H+R+WG PA V + K++ ++ C FIGYP+ ++GY F
Sbjct: 670 SVPKTPYELWTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRF 729
Query: 356 CSPQDKKVFVST-NATFLEDRYIEECESKSKVLLEEMRENLPSSSIPEIRXXXXXXXXXX 532
P FV T +A FLED I ++ LEE R ++P+ S E
Sbjct: 730 YCPNSYTKFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPA 789
Query: 533 XXXLVAGSSGRQTEAPPTVPTRSPIPEMEGDRVPIVQ--TPLGAKDENEEHREQ------ 688
+ E P V T P+ M P++Q T + A E E + Q
Sbjct: 790 MPVI---------EVPAPVVT-LPVATMNESEEPVIQDSTEMVATPEEELQQSQIDNVPV 839
Query: 689 ELVGXXXXXXXXXXXXXVRRSGRVIRPPSR--YLLYGESFEAVSTEQEEDPTSYKEAMED 862
+ RRS RV R R Y +Y + E+DPTSY+EAM
Sbjct: 840 QETHQEPQVQDVPNVQAPRRSERVRRSAIRDDYKVY----NIEESHMEDDPTSYEEAMRS 895
Query: 863 IDVDHWRSAMDSEMKSMYTKSV*DLVDLPNGVKPIGCKWVYKRKRGIDGKVETYKARL 1036
W +M EM+SM V DL ++P G K +GCKWVYK K G +E +KARL
Sbjct: 896 ARSSEWLESMKDEMESMKLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARL 953