BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00030096
         (500 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66968.1| hypothetical protein VITISV_040712 [Vitis vinifera]   102   2e-22
emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]    97   4e-20
emb|CAN67730.1| hypothetical protein VITISV_044473 [Vitis vinifera]    96   7e-20
emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]    96   1e-19
emb|CAN70635.1| hypothetical protein VITISV_019049 [Vitis vinifera]    94   3e-19
emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]    94   3e-19
emb|CAN60378.1| hypothetical protein VITISV_032103 [Vitis vinifera]    94   4e-19
emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera]    94   4e-19
gb|KYP31691.1| Retrovirus-related Pol polyprotein from transposo...    93   6e-19
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]    93   7e-19
emb|CAN64324.1| hypothetical protein VITISV_005640 [Vitis vinifera]    92   1e-18
gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposo...    91   3e-18
gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposo...    91   3e-18
gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposo...    91   3e-18
gb|KYP55105.1| Copia protein [Cajanus cajan]                           89   2e-17
gb|KYP53191.1| Copia protein [Cajanus cajan]                           87   2e-17
gb|PKU66353.1| Retrovirus-related Pol polyprotein from transposo...    88   3e-17
gb|PKU64531.1| Retrovirus-related Pol polyprotein from transposo...    88   5e-17
emb|CAN71808.1| hypothetical protein VITISV_011726 [Vitis vinifera]    87   8e-17
gb|KYP55144.1| Copia protein [Cajanus cajan]                           86   1e-16

>emb|CAN66968.1| hypothetical protein VITISV_040712 [Vitis vinifera]
          Length = 481

 Score =  102 bits (255), Expect = 2e-22
 Identities = 70/162 (43%), Positives = 92/162 (56%), Gaps = 18/162 (11%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*FL*K---- 150
           AIR+LL   CFK+ F LYQ+DVK  FLNGFI  EVY       +S  F    F  K    
Sbjct: 39  AIRMLLVFRCFKD-FILYQIDVKCAFLNGFINEEVYVEQPPGFQSFNFPNHVFKLKKTLY 97

Query: 151 -------ALYN**T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFMLIIFLVLLMNICAR 309
                  A Y   +   L+N F  GK+DTTL +  K   ++L ++MLI FLVLLM++   
Sbjct: 98  GLKQAPRAWYERFSKFLLENGFKMGKIDTTLFIKTKENDMFLVQYMLISFLVLLMSLWEE 157

Query: 310 YFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
           ++ K M  E EMSMMG+LNF+L LQI Q +E  +I   + +R
Sbjct: 158 FY-KCMHNEFEMSMMGKLNFILRLQIKQLKEGTFINQAKYIR 198


>emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]
          Length = 887

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 66/146 (45%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVYRSLKF*AK*FL*KALYN**T*LFL 183
           AIR+LLA +CFK+ F LYQMDVKS FLN FI  E    LK   +     A Y   +   L
Sbjct: 494 AIRMLLAFACFKD-FVLYQMDVKSAFLNNFINEEALYGLKQAPR-----AWYERLSKFLL 547

Query: 184 QNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNICARYFSKLMQGELEMSMMG 357
           +  F  GK+DTTL +  K   + L +  +  IIF    +++C   FSK M  E EMSMMG
Sbjct: 548 KKGFKMGKIDTTLFIKTKDNDMLLVQIYVDDIIFGATNVSLCEG-FSKCMHSEFEMSMMG 606

Query: 358 ELNFLLGLQIIQCQEDGYIRTLEGVR 435
           ELNF LGLQI Q +E  +I   + +R
Sbjct: 607 ELNFFLGLQIKQLKEGTFINQAKYIR 632


>emb|CAN67730.1| hypothetical protein VITISV_044473 [Vitis vinifera]
          Length = 669

 Score = 95.9 bits (237), Expect = 7e-20
 Identities = 69/164 (42%), Positives = 90/164 (54%), Gaps = 20/164 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*FL*K---- 150
           AIR+LLA +CFK+ F LYQM+VKS FLNGFI  EVY       +S  F    F  K    
Sbjct: 39  AIRMLLAFACFKD-FVLYQMBVKSAFLNGFINEEVYVEQPPGLQSFNFPNHVFKLKKSLY 97

Query: 151 -------ALYN**T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                  A Y   +   L+  F  GK+DTTL +  K   + L +  +  IIF    +++C
Sbjct: 98  GLKQAPRACYERLSKFLLKRGFKMGKIDTTLFIKTKENDMLLVQIYVDDIIFGATNVSLC 157

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
              FSK M  E EMSMMGELNF LGLQI Q +E+ +I   + ++
Sbjct: 158 EE-FSKCMHSEFEMSMMGELNFFLGLQIKQLKEETFINQAKYIK 200


>emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]
          Length = 857

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 73/164 (44%), Positives = 90/164 (54%), Gaps = 20/164 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
           AIR+LLA +CFK  F LYQMDVKS FLNGFI  EVY       +S  F    F L KALY
Sbjct: 39  AIRMLLAFACFKY-FVLYQMDVKSAFLNGFINEEVYVEQPPGFQSFNFPNNVFRLKKALY 97

Query: 160 N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                        +   L+  F  GK+DTTL +  K   + L +  +  IIF    +++C
Sbjct: 98  GLKQAPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKDNGMLLVQIYVDDIIFGATNVSLC 157

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
              FSK M  E EMSMMGELNF LGLQI Q +E  +I   + +R
Sbjct: 158 EE-FSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIR 200


>emb|CAN70635.1| hypothetical protein VITISV_019049 [Vitis vinifera]
          Length = 691

 Score = 94.4 bits (233), Expect = 3e-19
 Identities = 71/164 (43%), Positives = 89/164 (54%), Gaps = 20/164 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*FL*K---- 150
           AIR+LLA +CFK+ F LYQMDVKS FLNGFI  EVY       +S  F    F  K    
Sbjct: 327 AIRMLLAFACFKD-FILYQMDVKSAFLNGFINEEVYVEQPPGFQSFNFPNHVFKLKKXLY 385

Query: 151 -------ALYN**T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                  A Y   +   L+  F  GK+DTTL +  K K + L +  +  IIF     ++C
Sbjct: 386 GLKQAPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKEKDMLLVQIYVDDIIFGATNDSLC 445

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
              FSK M  E EMSMMGELNF LGLQI Q +E  +I   + ++
Sbjct: 446 ED-FSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIK 488


>emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]
          Length = 455

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 69/164 (42%), Positives = 88/164 (53%), Gaps = 20/164 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*FL*K---- 150
           AIR+LLA +CFK+ F LYQMDVKS FLNGFI  EVY       +S  F    F  K    
Sbjct: 39  AIRMLLAFACFKD-FVLYQMDVKSAFLNGFINEEVYVEQPPGFQSFNFPNHVFRLKKTLY 97

Query: 151 -------ALYN**T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                  A Y   +   L+  F  GK+D TL +  K   + L +  +  IIF    +++C
Sbjct: 98  GLKQAXRAWYERLSKFJLKKGFKMGKIDXTLFIKTKXNDMLLVQIYVDDIIFGATNVSLC 157

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
              FSK M  E EMSMMGELNF +GLQI Q +E  +I   + +R
Sbjct: 158 EE-FSKCMHSEFEMSMMGELNFFIGLQIKQLKEGTFINQAKYIR 200


>emb|CAN60378.1| hypothetical protein VITISV_032103 [Vitis vinifera]
          Length = 1359

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 81/195 (41%), Positives = 103/195 (52%), Gaps = 30/195 (15%)
 Frame = +1

Query: 4    AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
            AIR+LLA +CFK+ F LYQMDVKS FLNGFI  EVY       +S  F    F L KALY
Sbjct: 848  AIRMLLAFACFKD-FVLYQMDVKSVFLNGFINEEVYVEQPPNFQSFNFPNHVFKLKKALY 906

Query: 160  N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                         +   L+  F   K+DTTL +  K K + L +  +  IIF    +++C
Sbjct: 907  GLKQAPRAWYERLSKFLLKKGFKMAKIDTTLFIKTKEKDMLLVQIYVDDIIFGATNVSLC 966

Query: 304  ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVRH*RK----------KN 453
               FSK M  E EMSMMGELNF LGLQI Q ++  +I   + +R   K          K 
Sbjct: 967  EE-FSKCMHSEFEMSMMGELNFFLGLQIKQPKKGTFINQAKYIRDLLKRFNMEEAKTMKT 1025

Query: 454  HLNLYG*RLTKVEKG 498
             ++LY  +L K EKG
Sbjct: 1026 PMSLY-IKLDKDEKG 1039


>emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera]
          Length = 550

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 69/164 (42%), Positives = 89/164 (54%), Gaps = 20/164 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*FL*K---- 150
           AIR++LA +CFK+ F LYQMDVKS FLNGFI  EVY       +S  F    F  K    
Sbjct: 262 AIRMVLAFACFKD-FVLYQMDVKSAFLNGFINEEVYVEQPPGFQSFNFPNHVFKLKKTLY 320

Query: 151 -------ALYN**T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                  A Y   +   L+  F  GK+DTTL +  K   + L +  +  IIF    +++C
Sbjct: 321 GLKQSPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKENDMLLVQIYVDDIIFGATNVSLC 380

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
              FSK M  E EMSMMGELNF LGL+I Q +E  +I   + +R
Sbjct: 381 EE-FSKCMHSEFEMSMMGELNFFLGLKIKQLKEGTFINQAKYIR 423


>gb|KYP31691.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 462

 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 72/157 (45%), Positives = 93/157 (59%), Gaps = 20/157 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVYRS-------LKF*AK*F-L*KALY 159
           AIR+LLA+S  + NFKLYQMDVKS FLNG IQ EVY          K+    + L KALY
Sbjct: 98  AIRLLLAYSSIR-NFKLYQMDVKSAFLNGLIQEEVYVEQPPGFIDFKYPHLVYKLKKALY 156

Query: 160 ----------N**T*LFLQNDFTKGKVDTTLLVLK-KGKIVYLCKFML-IIFLVLLMNIC 303
                     +  +   ++ND+ KGKVD TL V K K  I+Y+  ++  I+F    +++C
Sbjct: 157 GLKQAPRSWYDRLSKFLIENDYIKGKVDNTLFVKKFKSDIMYVQIYVDDIVFGSTNVSLC 216

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYI 414
            + FSK MQGE EMSMMGEL   LGLQI Q  +  +I
Sbjct: 217 -KEFSKTMQGEFEMSMMGELTLFLGLQIKQMSDGIFI 252


>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
          Length = 898

 Score = 93.2 bits (230), Expect = 7e-19
 Identities = 72/164 (43%), Positives = 90/164 (54%), Gaps = 20/164 (12%)
 Frame = +1

Query: 4    AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
            AIR+LLA +CFK+ F LYQMDVKS FLNGFI  EVY       +S  F    F L KALY
Sbjct: 713  AIRMLLAFACFKD-FILYQMDVKSXFLNGFINEEVYXEQPPGFQSFNFPNHVFKLKKALY 771

Query: 160  N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                         +    +  F  GK+DTTL +  K K + L +  +  IIF     ++C
Sbjct: 772  GLKQAPRAWYERLSKFLXKKGFKMGKIDTTLFIKTKEKDMLLVQIYVDDIIFGATNBSLC 831

Query: 304  ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
               FSK M  E EMSMMGELNF LGLQI Q +E  +I   + ++
Sbjct: 832  ED-FSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIK 874


>emb|CAN64324.1| hypothetical protein VITISV_005640 [Vitis vinifera]
          Length = 557

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 72/164 (43%), Positives = 92/164 (56%), Gaps = 20/164 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
           AIR+LLA +CFK+ F LYQ+DVKS FLNGFI  EVY       +S  F    F L KALY
Sbjct: 74  AIRMLLALACFKD-FILYQVDVKSAFLNGFINEEVYVEQPPGFQSFNFPNHVFKLKKALY 132

Query: 160 N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                        +   L+  F  GK+DTTL +  K   + L +  +  IIF V  +++C
Sbjct: 133 GLKQAPRAWYERLSKFLLKKVFKMGKIDTTLFIKTKENDMLLIQIYVDDIIFGVTNVSLC 192

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
              FSK M  E EMS+MGELNF LGLQI Q +E  +I   + +R
Sbjct: 193 ED-FSKCMHSEFEMSIMGELNFFLGLQIKQLKEGTFINQAKYIR 235


>gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 900

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 71/157 (45%), Positives = 90/157 (57%), Gaps = 20/157 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
           AIR+LLA++   + FKLYQMDVKS FLNGFIQ EVY        + +F    F L KALY
Sbjct: 479 AIRMLLAYASIMD-FKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALY 537

Query: 160 N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                        +   L+ +FT+GKVDTTL + +K   + L +  +  IIF      +C
Sbjct: 538 GLKQAPRAWYERLSKFLLEKEFTRGKVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLC 597

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYI 414
            + FS  MQ E EMSMMGELNF LGLQI Q +   +I
Sbjct: 598 -KEFSNDMQSEFEMSMMGELNFFLGLQIRQTKNGIFI 633


>gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1011

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 71/157 (45%), Positives = 90/157 (57%), Gaps = 20/157 (12%)
 Frame = +1

Query: 4    AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
            AIR+LLA++   + FKLYQMDVKS FLNGFIQ EVY        + +F    F L KALY
Sbjct: 590  AIRMLLAYASIMD-FKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALY 648

Query: 160  N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                         +   L+ +FT+GKVDTTL + +K   + L +  +  IIF      +C
Sbjct: 649  GLKQAPRAWYERLSKFLLEKEFTRGKVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLC 708

Query: 304  ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYI 414
             + FS  MQ E EMSMMGELNF LGLQI Q +   +I
Sbjct: 709  -KEFSNDMQSEFEMSMMGELNFFLGLQIRQTKNGIFI 744


>gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1021

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 71/157 (45%), Positives = 90/157 (57%), Gaps = 20/157 (12%)
 Frame = +1

Query: 4    AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
            AIR+LLA++   + FKLYQMDVKS FLNGFIQ EVY        + +F    F L KALY
Sbjct: 600  AIRMLLAYASIMD-FKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALY 658

Query: 160  N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                         +   L+ +FT+GKVDTTL + +K   + L +  +  IIF      +C
Sbjct: 659  GLKQAPRAWYERLSKFLLEKEFTRGKVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLC 718

Query: 304  ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYI 414
             + FS  MQ E EMSMMGELNF LGLQI Q +   +I
Sbjct: 719  -KEFSNDMQSEFEMSMMGELNFFLGLQIRQTKNGIFI 754


>gb|KYP55105.1| Copia protein [Cajanus cajan]
          Length = 495

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 69/157 (43%), Positives = 90/157 (57%), Gaps = 20/157 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
           AIR+LLA++   + FKLYQMDVKS FLNGFIQ EVY        + +F    F L KALY
Sbjct: 74  AIRMLLAYASIMD-FKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALY 132

Query: 160 N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                        +   L+ +FT+GKVDTTL + +K   + L +  +  IIF      +C
Sbjct: 133 GLKQAPRAWYERLSKFLLEKEFTRGKVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLC 192

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYI 414
            + FS  MQ E EMSM+GELNF +GLQI Q +   +I
Sbjct: 193 -KEFSNDMQSEFEMSMIGELNFFIGLQIRQTKNGIFI 228


>gb|KYP53191.1| Copia protein [Cajanus cajan]
          Length = 284

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 64/157 (40%), Positives = 87/157 (55%), Gaps = 20/157 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVYRS-------LKF*AK*FL*K---- 150
           AIR+LLA++    NFKLYQMDV + FLNGFIQ EVY          K+    +  K    
Sbjct: 76  AIRLLLAYASIM-NFKLYQMDVNNVFLNGFIQEEVYVEQPPGFVDYKYPNHVYKLKKELY 134

Query: 151 -------ALYN**T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                  + Y+  + + + ND+ +GKVD TL V K  K     +  +  I+F  + +++C
Sbjct: 135 GLKQAPRSWYDRLSKILIDNDYIRGKVDNTLFVKKFKKDTMYVQIYVDDIVFGSINLSLC 194

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYI 414
              F+K MQGE EMSMMGEL F LGLQI Q  +  +I
Sbjct: 195 EE-FAKTMQGECEMSMMGELTFFLGLQIKQMNDSIFI 230


>gb|PKU66353.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 452

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 20/173 (11%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
           AIR+LLA +CFK +FKL+QMDVKS FLNG I+ +VY        + K+    F L KALY
Sbjct: 240 AIRVLLAFACFK-SFKLFQMDVKSAFLNGVIEEDVYVEQPPGFENSKYPNHVFKLKKALY 298

Query: 160 N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                        +   L+  F KG VDTTL + K GK + + +  +  IIF     N+C
Sbjct: 299 GLKQAPRAWYERLSTFLLERSFEKGSVDTTLFLKKFGKEILIVQIYVDDIIFGSSNKNLC 358

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVRH*RKKNHLN 462
              FS  M  E EMS+MG+LN+ LG  I Q +E  ++   + ++   KK  ++
Sbjct: 359 DD-FSNTMSSEFEMSLMGDLNYFLGFSIKQLEEGTFLSQTKYIKDILKKYEMD 410


>gb|PKU64531.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 575

 Score = 87.8 bits (216), Expect = 5e-17
 Identities = 67/173 (38%), Positives = 93/173 (53%), Gaps = 20/173 (11%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
           AIR+LLA +CFK  FKL+QMDVKS FLNG I+ +VY        + K+    F L KALY
Sbjct: 248 AIRVLLAFACFK-GFKLFQMDVKSAFLNGVIEEDVYVEQPPGFENSKYPNHVFKLKKALY 306

Query: 160 N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                        +   L+  F KG VDTTL + K GK + + +  +  IIF     N+C
Sbjct: 307 GLKQAPRAWYERLSTFLLERSFEKGSVDTTLFLKKFGKEILIVQIYVDDIIFGSSNKNLC 366

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVRH*RKKNHLN 462
              FS  M  E EMS+MG+LN+ LG  I Q +E  ++   + ++   KK  ++
Sbjct: 367 DD-FSNAMSSEFEMSLMGDLNYFLGFSIKQLEEGTFLSQTKYIKDILKKYEMD 418


>emb|CAN71808.1| hypothetical protein VITISV_011726 [Vitis vinifera]
          Length = 553

 Score = 87.0 bits (214), Expect = 8e-17
 Identities = 68/164 (41%), Positives = 90/164 (54%), Gaps = 20/164 (12%)
 Frame = +1

Query: 4   AIRILLAHSCFKENFKLYQMDVKSNFLNGFIQIEVY-------RSLKF*AK*F-L*KALY 159
           AIR+LLA +CFK+ F LYQM++KS FLNGFI  EV+       +S  F    F L KALY
Sbjct: 235 AIRMLLAFACFKD-FVLYQMNMKSAFLNGFINEEVFVEQPLGFQSFNFPNHVFKLKKALY 293

Query: 160 N**----------T*LFLQNDFTKGKVDTTLLVLKKGKIVYLCKFML--IIFLVLLMNIC 303
                        +   L+  F  GK+DTTL +  K   + L +  +  +IF    +++C
Sbjct: 294 GLKQAPRSWYERLSKFLLKKCFKMGKIDTTLFIKIKENDMLLVQIYIDDVIFGATNVSLC 353

Query: 304 ARYFSKLMQGELEMSMMGELNFLLGLQIIQCQEDGYIRTLEGVR 435
              FSK M  E EMSMMGELNF L LQI Q +E  +I   + +R
Sbjct: 354 EE-FSKCMYSEFEMSMMGELNFFLELQIKQLKEGTFINQAKYIR 396


>gb|KYP55144.1| Copia protein [Cajanus cajan]
          Length = 316

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 64/144 (44%), Positives = 82/144 (56%), Gaps = 20/144 (13%)
 Frame = +1

Query: 43  NFKLYQMDVKSNFLNGFIQIEVYRSLKF*AK*F--------L*KALY----------N** 168
           NFKLYQMDVKS FLNG IQ EVY         F        L KALY          +  
Sbjct: 2   NFKLYQMDVKSAFLNGLIQEEVYVEQPTGFVEFKYPNHVYKLKKALYGLKQAPRSWYDRL 61

Query: 169 T*LFLQNDFTKGKVDTTLLVLK-KGKIVYLCKFML-IIFLVLLMNICARYFSKLMQGELE 342
           +  F++ND+ +GKVD TL V K K   +Y+  ++  I+F    +++C + F+K MQGE E
Sbjct: 62  SKFFIENDYVRGKVDNTLFVKKFKNDTMYVQIYVDDIVFGSTNVSLC-KEFAKTMQGEFE 120

Query: 343 MSMMGELNFLLGLQIIQCQEDGYI 414
           MSMMGEL F LGLQI Q  +  +I
Sbjct: 121 MSMMGELTFFLGLQIKQMSDGIFI 144