BLASTX nr result

ID: Rehmannia29_contig00029941 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00029941
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_016542738.1| PREDICTED: uncharacterized protein LOC107843...    53   4e-06

>ref|XP_016542738.1| PREDICTED: uncharacterized protein LOC107843085 isoform X1
           [Capsicum annuum]
          Length = 114

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = +2

Query: 5   IELGRKVGRSEVWLDTHKKKDGTYVNEAAKNISVSYNCIYNI-YSICLVTLNIMS 166
           +E G K GR+E++LDTHKK+DG++VNE AK I V  N + +I Y   +V LN+ S
Sbjct: 28  VETGHKPGRAELYLDTHKKEDGSHVNEVAKEICV--NTLLSIFYRFNIVLLNLKS 80


Top