BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00029878
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN14870.1| hypothetical protein CDL12_12520 [Handroanthus im...   115   4e-27
ref|XP_022860461.1| pentatricopeptide repeat-containing protein ...    99   3e-21
ref|XP_012858354.1| PREDICTED: pentatricopeptide repeat-containi...    88   2e-17
ref|XP_011076945.1| pentatricopeptide repeat-containing protein ...    77   1e-13
gb|KZV29412.1| pentatricopeptide repeat-containing protein chlor...    70   6e-11
gb|OVA02380.1| Pentatricopeptide repeat [Macleaya cordata]             69   8e-11
ref|XP_017254605.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-10
gb|KZM89551.1| hypothetical protein DCAR_023086 [Daucus carota s...    69   1e-10
ref|XP_007205118.2| pentatricopeptide repeat-containing protein ...    68   2e-10
ref|XP_021651291.1| pentatricopeptide repeat-containing protein ...    67   7e-10
ref|XP_008218329.1| PREDICTED: pentatricopeptide repeat-containi...    66   9e-10
ref|XP_021282339.1| pentatricopeptide repeat-containing protein ...    65   2e-09
gb|PPS19710.1| hypothetical protein GOBAR_AA00837 [Gossypium bar...    65   3e-09
ref|XP_016673363.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-09
ref|XP_012492771.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-09
gb|EEF40384.1| pentatricopeptide repeat-containing protein, puta...    64   4e-09
ref|XP_002521980.2| PREDICTED: pentatricopeptide repeat-containi...    64   4e-09
ref|XP_017977060.1| PREDICTED: pentatricopeptide repeat-containi...    64   8e-09
gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p...    64   8e-09
gb|PON55487.1| Tetratricopeptide-like helical domain containing ...    63   1e-08

>gb|PIN14870.1| hypothetical protein CDL12_12520 [Handroanthus impetiginosus]
          Length = 584

 Score =  115 bits (288), Expect = 4e-27
 Identities = 57/86 (66%), Positives = 68/86 (79%)
 Frame = -1

Query: 260 MTTPFYAEFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTK 81
           MTT  Y EFFPQGL F QH KLST KS+KN VFRC +  EP  RNY RNP RV+VST+ +
Sbjct: 1   MTTTLYGEFFPQGLNFPQH-KLSTSKSYKNPVFRCRSHSEPKIRNY-RNPLRVKVSTEAR 58

Query: 80  PTHLPTYNGFKEAHFVKLLHRSCKAG 3
           P++L +YN FKEAHF+KLL+RSCK+G
Sbjct: 59  PSYLNSYNDFKEAHFLKLLNRSCKSG 84


>ref|XP_022860461.1| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Olea europaea var. sylvestris]
          Length = 577

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 49/86 (56%), Positives = 61/86 (70%)
 Frame = -1

Query: 260 MTTPFYAEFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTK 81
           MT  F +EFFP+ L+F    K   RKSH NSV RC +   P  +N YR+P+ V+VST+T+
Sbjct: 6   MTASFTSEFFPECLVFGVQRKFG-RKSHHNSVVRCRHHNHP-IKNKYRSPQIVKVSTETR 63

Query: 80  PTHLPTYNGFKEAHFVKLLHRSCKAG 3
           P HLP +N FKEAHF+KLL RSCKAG
Sbjct: 64  PNHLPDFNDFKEAHFLKLLKRSCKAG 89


>ref|XP_012858354.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Erythranthe guttata]
          Length = 611

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 53/97 (54%), Positives = 58/97 (59%), Gaps = 12/97 (12%)
 Frame = -1

Query: 257 TTPFYAEFFPQGLIFTQHNKLSTRKSHKNS--VFRCSNQI---EPNFRNYYRNPERVR-- 99
           TT F AEFFPQ LIFTQ+ KLS  KSH  +  VFRCS+       N  N YR P+R    
Sbjct: 15  TTIFCAEFFPQALIFTQNKKLSITKSHHQNPHVFRCSSSSYSESKNTSNNYRIPQRGNKV 74

Query: 98  VSTDTKPT-----HLPTYNGFKEAHFVKLLHRSCKAG 3
           +STD         HLP Y  FKE HF KLLHRSCKAG
Sbjct: 75  ISTDNNNNRPPNPHLPFYKDFKETHFTKLLHRSCKAG 111


>ref|XP_011076945.1| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Sesamum indicum]
          Length = 582

 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = -1

Query: 143 EPNFRNYYRNPERVRVSTDTKPTHLPTYNGFKEAHFVKLLHRSCKAG 3
           EP  RNY RNP RV+VSTDT+P  LP+YN FKEAHF+KLLHRSCKAG
Sbjct: 37  EPKIRNY-RNPVRVKVSTDTRPHQLPSYNDFKEAHFLKLLHRSCKAG 82


>gb|KZV29412.1| pentatricopeptide repeat-containing protein chloroplastic
           [Dorcoceras hygrometricum]
          Length = 584

 Score = 69.7 bits (169), Expect = 6e-11
 Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
 Frame = -1

Query: 263 LMTTPFYAEFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPN---FRNYYRNPERVRVS 93
           LMTT  Y EFFPQ L F  H KL   K H + +FRC +Q        R ++R        
Sbjct: 6   LMTTTSYPEFFPQAL-FLSHQKLRA-KFHHSCIFRCRHQTNSGTKKLRTFHR-------- 55

Query: 92  TDTKPTHLPTYNGFKEAHFVKLLHRSCKAG 3
            +T+P   P Y  FKE HF+KLL+RSCK G
Sbjct: 56  -ETRPNDFPIYKDFKEGHFLKLLNRSCKEG 84


>gb|OVA02380.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 582

 Score = 69.3 bits (168), Expect = 8e-11
 Identities = 36/79 (45%), Positives = 49/79 (62%)
 Frame = -1

Query: 239 EFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTY 60
           EFFP     + H K  +  SH+N +  C N I  +  +  RNP R+RVST+T+ TH  + 
Sbjct: 7   EFFPHCSPLSTHTKPYSPSSHQNCIISCINPIPNDLSS--RNPPRIRVSTETRSTHFQSI 64

Query: 59  NGFKEAHFVKLLHRSCKAG 3
           + FKE H +KLL+RSCKAG
Sbjct: 65  D-FKETHLMKLLNRSCKAG 82


>ref|XP_017254605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Daucus carota subsp. sativus]
          Length = 569

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 41/84 (48%), Positives = 52/84 (61%)
 Frame = -1

Query: 254 TPFYAEFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPT 75
           T +  E FPQ L+F    KL +  SH N +  C+N       N  RNP +VRVS D+  T
Sbjct: 7   TIYSCEVFPQCLLF---GKLLSVNSHYNVLVHCTNS------NSSRNPGKVRVSADSTLT 57

Query: 74  HLPTYNGFKEAHFVKLLHRSCKAG 3
           HL +YN F+E+H VKLL+RSCKAG
Sbjct: 58  HLHSYN-FQESHLVKLLNRSCKAG 80


>gb|KZM89551.1| hypothetical protein DCAR_023086 [Daucus carota subsp. sativus]
          Length = 634

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 41/84 (48%), Positives = 52/84 (61%)
 Frame = -1

Query: 254 TPFYAEFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPT 75
           T +  E FPQ L+F    KL +  SH N +  C+N       N  RNP +VRVS D+  T
Sbjct: 7   TIYSCEVFPQCLLF---GKLLSVNSHYNVLVHCTNS------NSSRNPGKVRVSADSTLT 57

Query: 74  HLPTYNGFKEAHFVKLLHRSCKAG 3
           HL +YN F+E+H VKLL+RSCKAG
Sbjct: 58  HLHSYN-FQESHLVKLLNRSCKAG 80


>ref|XP_007205118.2| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Prunus persica]
          Length = 585

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239 EFFPQGL-IFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPT 63
           +F PQ L   T   KL++   H N+   C   I  N RN  RN  +V VS +TKPTHLP 
Sbjct: 7   KFLPQNLHATTALLKLTSHSPHTNAAVSCRVCISSNGRNSSRNLTKVMVSAETKPTHLPN 66

Query: 62  YNGFKEAHFVKLLHRSCKAG 3
           Y+  KE H +K+L RSCKAG
Sbjct: 67  YD-IKETHLIKVLSRSCKAG 85


>ref|XP_021651291.1| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Hevea brasiliensis]
          Length = 583

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 38/84 (45%), Positives = 51/84 (60%)
 Frame = -1

Query: 254 TPFYAEFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPT 75
           T F  EF P  + FT      T  S  ++V  C N  + N  N  RNP +VRVS +T+PT
Sbjct: 2   TLFSTEFVPHSIPFTTLQLKPTSNSLHSTVVGCINP-KLNDANNLRNPPKVRVSAETRPT 60

Query: 74  HLPTYNGFKEAHFVKLLHRSCKAG 3
           H+ +++ FKE H +KLL+RSCKAG
Sbjct: 61  HVLSFD-FKEIHLMKLLNRSCKAG 83


>ref|XP_008218329.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Prunus mume]
          Length = 592

 Score = 66.2 bits (160), Expect = 9e-10
 Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239 EFFPQGL-IFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPT 63
           +  PQ L   T   KL++   H N+   C   I  N RN  RN  +V VS +TKPTHLP 
Sbjct: 14  KLLPQNLHATTAQLKLTSHSPHTNAAVSCRVCISSNGRNSSRNLIKVMVSAETKPTHLPN 73

Query: 62  YNGFKEAHFVKLLHRSCKAG 3
           Y+  KE H +K+L RSCKAG
Sbjct: 74  YD-IKETHLIKVLSRSCKAG 92


>ref|XP_021282339.1| pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Herrania umbratica]
          Length = 586

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = -1

Query: 254 TPFYAEFFPQGLIFT--QHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTK 81
           T F  E  P  L FT  Q    S   SH  S+  C N    +  +  R  E+VRVS +T+
Sbjct: 2   TLFSTELVPHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDRSSKSRKKEKVRVSAETR 61

Query: 80  PTHLPTYNGFKEAHFVKLLHRSCKAG 3
           PTHL +++ FKE H +KLL+RSCKAG
Sbjct: 62  PTHLLSFD-FKETHLMKLLNRSCKAG 86


>gb|PPS19710.1| hypothetical protein GOBAR_AA00837 [Gossypium barbadense]
          Length = 588

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
 Frame = -1

Query: 260 MTTPFYAEFFPQGLIF--TQHNKLSTRKSHKNSVFRC-SNQIEPNFRNYYRNPERVRVST 90
           MT  F  E  P GL F   Q   +S   SH  S+  C S++   +     RN ++VRVS 
Sbjct: 1   MTVLFSTELIPHGLPFHPQQLKPVSNSSSHHTSLVSCLSHEGTKDSIRKSRNNQKVRVSA 60

Query: 89  DTKPTHLPTYNGFKEAHFVKLLHRSCKAG 3
           +T+PTHL +++ FKE+H +KLL+RSCK+G
Sbjct: 61  ETRPTHLSSFD-FKESHLMKLLNRSCKSG 88


>ref|XP_016673363.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Gossypium hirsutum]
          Length = 588

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
 Frame = -1

Query: 260 MTTPFYAEFFPQGLIF--TQHNKLSTRKSHKNSVFRC-SNQIEPNFRNYYRNPERVRVST 90
           MT  F  E  P GL F   Q   +S   SH  S+  C S++   +     RN ++VRVS 
Sbjct: 1   MTVLFSTELIPHGLPFHPQQLKPVSNSSSHHTSLVSCLSHEGTKDSIRKSRNNQKVRVSA 60

Query: 89  DTKPTHLPTYNGFKEAHFVKLLHRSCKAG 3
           +T+PTHL +++ FKE+H +KLL+RSCK+G
Sbjct: 61  ETRPTHLSSFD-FKESHLMKLLNRSCKSG 88


>ref|XP_012492771.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Gossypium raimondii]
 ref|XP_016713276.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Gossypium hirsutum]
 gb|KJB44850.1| hypothetical protein B456_007G275900 [Gossypium raimondii]
          Length = 588

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
 Frame = -1

Query: 260 MTTPFYAEFFPQGLIF--TQHNKLSTRKSHKNSVFRC-SNQIEPNFRNYYRNPERVRVST 90
           MT  F  E  P GL F   Q   +S   SH  S+  C S++   +     RN ++VRVS 
Sbjct: 1   MTVLFSTELIPHGLPFHPQQLKPVSNSSSHHTSLVSCLSHEGTKDSIRKSRNNQKVRVSA 60

Query: 89  DTKPTHLPTYNGFKEAHFVKLLHRSCKAG 3
           +T+PTHL +++ FKE+H +KLL+RSCK+G
Sbjct: 61  ETRPTHLSSFD-FKESHLMKLLNRSCKSG 88


>gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 35/84 (41%), Positives = 50/84 (59%)
 Frame = -1

Query: 254 TPFYAEFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPT 75
           T F  EF P  + FT      T  S  +++  C    E N  N  RNP++VRVS +T+ T
Sbjct: 2   TLFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRP-ELNDANKVRNPQKVRVSAETRQT 60

Query: 74  HLPTYNGFKEAHFVKLLHRSCKAG 3
           H+ +++ FKE H +KLL+RSC+AG
Sbjct: 61  HVLSFD-FKEVHLMKLLNRSCRAG 83


>ref|XP_002521980.2| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Ricinus communis]
          Length = 585

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 35/84 (41%), Positives = 50/84 (59%)
 Frame = -1

Query: 254 TPFYAEFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPT 75
           T F  EF P  + FT      T  S  +++  C    E N  N  RNP++VRVS +T+ T
Sbjct: 2   TLFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRP-ELNDANKVRNPQKVRVSAETRQT 60

Query: 74  HLPTYNGFKEAHFVKLLHRSCKAG 3
           H+ +++ FKE H +KLL+RSC+AG
Sbjct: 61  HVLSFD-FKEVHLMKLLNRSCRAG 83


>ref|XP_017977060.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic [Theobroma cacao]
          Length = 586

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = -1

Query: 254 TPFYAEFFPQGLIFT--QHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTK 81
           T F  E     L FT  Q    S   SH  S+  C N    +  +  RN ++VRVS +T+
Sbjct: 2   TLFSTELVTHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAETR 61

Query: 80  PTHLPTYNGFKEAHFVKLLHRSCKAG 3
           PTHL +++ FKE H +KLL+RSCKAG
Sbjct: 62  PTHLLSFD-FKETHLMKLLNRSCKAG 86


>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 586

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = -1

Query: 254 TPFYAEFFPQGLIFT--QHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTK 81
           T F  E     L FT  Q    S   SH  S+  C N    +  +  RN ++VRVS +T+
Sbjct: 2   TLFSTELVTHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAETR 61

Query: 80  PTHLPTYNGFKEAHFVKLLHRSCKAG 3
           PTHL +++ FKE H +KLL+RSCKAG
Sbjct: 62  PTHLLSFD-FKETHLMKLLNRSCKAG 86


>gb|PON55487.1| Tetratricopeptide-like helical domain containing protein
           [Parasponia andersonii]
          Length = 584

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 34/79 (43%), Positives = 45/79 (56%)
 Frame = -1

Query: 239 EFFPQGLIFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTY 60
           EF PQ L  T H K +++K H ++V  C        +N+ R P   RVS DT+  HL   
Sbjct: 7   EFLPQSLAITVHPKPTSQKLHHSTVVSCRVPSFSESKNFSRKPFDSRVSVDTRAPHLHR- 65

Query: 59  NGFKEAHFVKLLHRSCKAG 3
           N +KE H +K L+RSCKAG
Sbjct: 66  NDYKENHLLKALNRSCKAG 84