BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00029843
         (674 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]   343   e-111
gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]              352   e-110
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]   336   e-109
ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207...   340   e-104
gb|AMY96445.1| gag/pol protein [Momordica dioica]                     333   e-103
gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escher...   315   6e-99
gb|PKI44202.1| hypothetical protein CRG98_035407 [Punica granatum]    301   1e-98
gb|PPY93112.1| hypothetical protein C5P31_25365, partial [Escher...   310   2e-97
gb|PKI65249.1| hypothetical protein CRG98_014398 [Punica granatum]    302   4e-95
gb|PNX87842.1| retrotransposon protein putative Ty1-copia subcla...   293   5e-94
emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]         296   1e-92
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   298   8e-92
gb|PKI73953.1| hypothetical protein CRG98_005646 [Punica granatum]    280   1e-91
gb|KYP68472.1| Retrovirus-related Pol polyprotein from transposo...   291   3e-91
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     301   5e-91
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     297   8e-91
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     298   9e-91
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   297   9e-91
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   298   2e-90
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc...   287   3e-90

>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score =  343 bits (879), Expect = e-111
 Identities = 161/224 (71%), Positives = 194/224 (86%)
 Frame = +2

Query: 2   SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
           SIRILLSI A++DYE+WQMDVKT FLNG L+E IYM+QP+GF+ K QE +VCKL++SI+G
Sbjct: 237 SIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYMVQPEGFVVKDQEQKVCKLQRSIYG 296

Query: 182 LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
           LKQASRSWNI F++A+KSYGF+QNL EPCVYK+I  +KV FLVLYVDDILLIGND+  L+
Sbjct: 297 LKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIGNDVESLS 356

Query: 362 SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
             K WLA QF MKDLGEASY+LGI++ RDRKN+ +ALSQA+YID +L +FAM+NSKKG  
Sbjct: 357 KVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALSQAAYIDKVLVKFAMENSKKGNL 416

Query: 542 PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
           P RHG+HLS+E CPKTP + E M++VPYASAVGSLMYAMLCTRP
Sbjct: 417 PSRHGVHLSKEQCPKTPQDEEKMRRVPYASAVGSLMYAMLCTRP 460


>gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]
          Length = 1292

 Score =  352 bits (902), Expect = e-110
 Identities = 165/224 (73%), Positives = 195/224 (87%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRILLSIA  ++YE+WQMDVKTAFLNG+L+E IYM+QP+GFI + QE +VCKL+KSI+G
Sbjct: 897  SIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYG 956

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD A+KSYGF+QN+DEPCVYKKI ++ V FL+LYVDDILLIGND+  LT
Sbjct: 957  LKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLT 1016

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
              K WL  QF MKDLGEA Y+LGI+I R+RKNK +A+SQASYID +L R+ MQNSKKGQ 
Sbjct: 1017 DVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQL 1076

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            PFRHGIHLS+E CPKTP EVE M+ +PY+SAVGSLMYAMLCTRP
Sbjct: 1077 PFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRP 1120


>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score =  336 bits (861), Expect = e-109
 Identities = 166/224 (74%), Positives = 186/224 (83%)
 Frame = +2

Query: 2   SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
           SIRILLSIAA+FDYE+WQMDVKTAFLNGSLDE IYM Q +GFI  GQEH +CKL +SI+G
Sbjct: 202 SIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQXEGFIXNGQEHLLCKLNRSIYG 261

Query: 182 LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
           LKQASRSWN  FDQ +K++GFDQ  DE CVYKK    KV FLVLYVDDILLIGN IGMLT
Sbjct: 262 LKQASRSWNTCFDQTIKTFGFDQCHDESCVYKKWNGKKVVFLVLYVDDILLIGNCIGMLT 321

Query: 362 SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
           S K WL+Q+FDMKDLGEA+++LGI++ R+RK K I LSQA YID IL RF MQ SKKG  
Sbjct: 322 SVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMIGLSQALYIDTILNRFNMQGSKKGFL 381

Query: 542 PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
           PFRHGI LS++  PKTP E+E MK VPYASAVGSLMYAMLCTRP
Sbjct: 382 PFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRP 425


>ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
            carota subsp. sativus]
          Length = 3860

 Score =  340 bits (872), Expect = e-104
 Identities = 161/224 (71%), Positives = 190/224 (84%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRILLSIAAH DYE+WQMDVKTAFLNG+L+E IYM QP+GFI++GQEH VCKLK+SI+G
Sbjct: 1039 SIRILLSIAAHLDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIKEGQEHLVCKLKRSIYG 1098

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASR WNI+FDQAV+SYGFDQ   E CVYK+ + N V FLVLYVDDILLIGN++ ML+
Sbjct: 1099 LKQASRYWNIRFDQAVQSYGFDQCPSEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLS 1158

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K WL +QF+MKDLGEA+Y+LGI++ RDRK + +ALSQ  YID++L RF MQ+SKKG  
Sbjct: 1159 SIKAWLFKQFEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYIDDVLARFNMQDSKKGNL 1218

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            PFRHG+ LS+  CP TP E+E MK VPYASA GSLMYAMLCTRP
Sbjct: 1219 PFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLCTRP 1262



 Score =  340 bits (872), Expect = e-104
 Identities = 161/224 (71%), Positives = 190/224 (84%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRILLSIAAH DYE+WQMDVKTAFLNG+L+E IYM QP+GFI++GQEH VCKLK+SI+G
Sbjct: 2254 SIRILLSIAAHLDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIKEGQEHLVCKLKRSIYG 2313

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASR WNI+FDQAV+SYGFDQ   E CVYK+ + N V FLVLYVDDILLIGN++ ML+
Sbjct: 2314 LKQASRYWNIRFDQAVQSYGFDQCPSEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLS 2373

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K WL +QF+MKDLGEA+Y+LGI++ RDRK + +ALSQ  YID++L RF MQ+SKKG  
Sbjct: 2374 SIKAWLFKQFEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYIDDVLARFNMQDSKKGNL 2433

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            PFRHG+ LS+  CP TP E+E MK VPYASA GSLMYAMLCTRP
Sbjct: 2434 PFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLCTRP 2477



 Score =  340 bits (872), Expect = e-104
 Identities = 161/224 (71%), Positives = 190/224 (84%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRILLSIAAH DYE+WQMDVKTAFLNG+L+E IYM QP+GFI++GQEH VCKLK+SI+G
Sbjct: 3469 SIRILLSIAAHLDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIKEGQEHLVCKLKRSIYG 3528

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASR WNI+FDQAV+SYGFDQ   E CVYK+ + N V FLVLYVDDILLIGN++ ML+
Sbjct: 3529 LKQASRYWNIRFDQAVQSYGFDQCPSEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLS 3588

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K WL +QF+MKDLGEA+Y+LGI++ RDRK + +ALSQ  YID++L RF MQ+SKKG  
Sbjct: 3589 SIKAWLFKQFEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYIDDVLARFNMQDSKKGNL 3648

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            PFRHG+ LS+  CP TP E+E MK VPYASA GSLMYAMLCTRP
Sbjct: 3649 PFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLCTRP 3692


>gb|AMY96445.1| gag/pol protein [Momordica dioica]
          Length = 1313

 Score =  333 bits (855), Expect = e-103
 Identities = 154/224 (68%), Positives = 187/224 (83%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRI+L+IAA FDYE+WQMDVKTAFLNG+L+E IYM+QP+GF+ + QE + CKL+ SI+G
Sbjct: 913  SIRIILAIAAFFDYEIWQMDVKTAFLNGNLEESIYMIQPEGFVAQDQEQKACKLQGSIYG 972

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD+ +K++GF QN+DE CVYKKI  + V FL+LYVDDILLIGND+  L 
Sbjct: 973  LKQASRSWNIRFDEVIKAFGFIQNVDESCVYKKISGSVVAFLILYVDDILLIGNDVEYLE 1032

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
              K WL   F MKDLGEA Y+LGIRI+RDR NK I +SQ++YID +L RF MQ+SKKG  
Sbjct: 1033 DVKKWLNTSFSMKDLGEAQYILGIRIYRDRSNKTIGMSQSTYIDKVLSRFKMQDSKKGLL 1092

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            PFRHGIHLS+E CPKTP EVE M+ +PY+SA+GSLMYAMLCTRP
Sbjct: 1093 PFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAIGSLMYAMLCTRP 1136


>gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escherichia coli]
          Length = 859

 Score =  315 bits (807), Expect = 6e-99
 Identities = 148/224 (66%), Positives = 186/224 (83%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRILL+IAA++DYE+WQMDVKT FLNG ++E I+M QP GF +     +VCKLK+SI+G
Sbjct: 489  SIRILLAIAAYYDYEIWQMDVKTTFLNGYIEENIFMEQPKGF-ESQDGSKVCKLKRSIYG 547

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD+A+KS+GF +N DEPCVYKK+ D+ +TFLVLYVDDILL+GND GMLT
Sbjct: 548  LKQASRSWNIRFDEAIKSFGFIKNEDEPCVYKKVSDSAITFLVLYVDDILLMGNDTGMLT 607

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            + K WL+  F MKDLGEA+Y+LGIRI+RDR  + I LSQ+ Y++ +L+RF M +SK+G  
Sbjct: 608  TIKVWLSNTFSMKDLGEATYILGIRIYRDRAKRIIGLSQSLYLEKVLKRFNMLDSKRGLL 667

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            P RHGIHLS+E  PKTP E + M ++PYASA+GSLMYAMLCTRP
Sbjct: 668  PVRHGIHLSKEMSPKTPEERDKMARIPYASAIGSLMYAMLCTRP 711


>gb|PKI44202.1| hypothetical protein CRG98_035407 [Punica granatum]
          Length = 405

 Score =  301 bits (772), Expect = 1e-98
 Identities = 146/224 (65%), Positives = 179/224 (79%)
 Frame = +2

Query: 2   SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
           S+RI+L+IAAH+DYEVWQMDVKTAFLN S++E I+M QP GF  K +  +VCKLK+SI+G
Sbjct: 168 SLRIMLAIAAHYDYEVWQMDVKTAFLNVSIEEDIFMDQPKGFESKDKS-KVCKLKRSIYG 226

Query: 182 LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
           L Q SRSWN +FD+AVKS+GF +  DEPCVYKK   + + FLVLYVDDILL+GND+GMLT
Sbjct: 227 LTQVSRSWNRRFDEAVKSFGFIKYEDEPCVYKKASGSMIAFLVLYVDDILLMGNDVGMLT 286

Query: 362 SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
           S   WL+  F MKDLGEA+Y+L IRI+RDR  + I LSQA Y+D +L+RF MQ+S++G  
Sbjct: 287 SVNVWLSNTFSMKDLGEATYILSIRIYRDRPKRLIGLSQALYLDKVLKRFNMQDSRRGLL 346

Query: 542 PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
           P RHGIHLS+   PKTP E E M +VPYASA+GSLMYAM CTRP
Sbjct: 347 PVRHGIHLSKAMSPKTPEEREKMAQVPYASAIGSLMYAMPCTRP 390


>gb|PPY93112.1| hypothetical protein C5P31_25365, partial [Escherichia coli]
          Length = 813

 Score =  310 bits (795), Expect = 2e-97
 Identities = 147/224 (65%), Positives = 185/224 (82%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRILL+IAA++DYE+WQMDVKTAFLNG ++E I+M QP GF +     +VCKLK+SI+G
Sbjct: 398  SIRILLAIAAYYDYEIWQMDVKTAFLNGYIEENIFMEQPKGF-ESQDGSKVCKLKRSIYG 456

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQA RSWNI+FD+A+KS+GF +N DEPCVYKK+ D+ +TFLVLYVDDILL+GND GMLT
Sbjct: 457  LKQALRSWNIRFDEAIKSFGFIKNEDEPCVYKKVSDSAITFLVLYVDDILLMGNDTGMLT 516

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            + K WL+  F MKDLGEA+Y+LGIRI+RDR  + I LSQ+ Y++ +L+RF M +SK+G  
Sbjct: 517  TIKVWLSNTFSMKDLGEATYILGIRIYRDRAKRIIGLSQSLYLEKVLKRFNMLDSKRGLL 576

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
              RHGIHLS+E  PKTP E + M ++PYASA+GSLMYAMLCTRP
Sbjct: 577  LVRHGIHLSKEMSPKTPEERDKMARIPYASAIGSLMYAMLCTRP 620


>gb|PKI65249.1| hypothetical protein CRG98_014398 [Punica granatum]
          Length = 727

 Score =  302 bits (773), Expect = 4e-95
 Identities = 147/224 (65%), Positives = 179/224 (79%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRI+L +AAH+DYEVWQMDVKTAFLN  ++E I+M QP GF  K +  +VCKLK+SI+G
Sbjct: 483  SIRIMLVVAAHYDYEVWQMDVKTAFLNEYIEEDIFMDQPKGFESKDKS-KVCKLKRSIYG 541

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQ SRSWN +FD+AVKS+GF +N  EPCVYKK   + + FLVLY+DDILLIGNDIG+LT
Sbjct: 542  LKQVSRSWNRRFDEAVKSFGFIKNEVEPCVYKKASGSMIVFLVLYMDDILLIGNDIGVLT 601

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K WL+  F MKDLGEA+Y+LGIRI+RD+  + I LSQA Y+D +L+RF MQ+SK+G  
Sbjct: 602  SIKVWLSDIFSMKDLGEATYILGIRIYRDKPKRLIGLSQALYMDKVLKRFNMQDSKRGLL 661

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            P RHGIH S+   PKTP E E M +VPYASA+GSLMY MLCTRP
Sbjct: 662  PVRHGIHFSKAMSPKTPEEREKMAQVPYASAIGSLMYVMLCTRP 705


>gb|PNX87842.1| retrotransposon protein putative Ty1-copia subclass, partial
           [Trifolium pratense]
          Length = 511

 Score =  293 bits (750), Expect = 5e-94
 Identities = 136/224 (60%), Positives = 175/224 (78%)
 Frame = +2

Query: 2   SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
           SIRILL+IAA++DYE+WQMDVKTAFLNG L E +YM QP+GF      ++VCKL++SI+G
Sbjct: 185 SIRILLAIAAYYDYEIWQMDVKTAFLNGELKEEVYMTQPEGFTSLSDHNKVCKLQRSIYG 244

Query: 182 LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
           LKQASRSWNI+F+  ++ + F +  +EPCVYKKI  + + FLVLYVDDILL GNDI  + 
Sbjct: 245 LKQASRSWNIRFNNTIEKFNFVKCEEEPCVYKKISGSSIIFLVLYVDDILLFGNDIPSMQ 304

Query: 362 SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
           S K WL++QF MKDLGEA+Y+LGI+I+RDR  + + LSQ+ YID IL+R+ M+ SK+G  
Sbjct: 305 STKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYL 364

Query: 542 PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
           P   G+ LSRE+CPKT  E E M +VPYASAVG++MY M CTRP
Sbjct: 365 PVGMGVSLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRP 408


>emb|CAE04463.2| OSJNBa0029L02.4 [Oryza sativa Japonica Group]
          Length = 746

 Score =  296 bits (758), Expect = 1e-92
 Identities = 142/224 (63%), Positives = 177/224 (79%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRI+L+IAA+FDYE+WQMDVKTAFLNG+LDE +YM QP GF+      ++CKL+KSI+G
Sbjct: 496  SIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYG 555

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD+ VK+ GF +N +EPCVYKKI  + + FL+LYVDDILLIGNDI ML 
Sbjct: 556  LKQASRSWNIRFDEVVKASGFVKNEEEPCVYKKINRSALGFLILYVDDILLIGNDIPMLK 615

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            SAK  L   F MKDLGEA+Y+LGIRI+RDR  + I LSQ++YI+ +L+RF MQ+SKKG  
Sbjct: 616  SAKTSLKNSFSMKDLGEATYILGIRIYRDRSKRLIGLSQSTYINKMLKRFNMQDSKKGFL 675

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
               HGI+L +  CP+T  E      +PYASA+GS+MYAMLCTRP
Sbjct: 676  SMSHGINLGKNQCPQTIDEQNKKSVIPYASAIGSIMYAMLCTRP 719


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana]
 emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  298 bits (764), Expect = 8e-92
 Identities = 142/224 (63%), Positives = 174/224 (77%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRILL+ AAH+DYE+WQMDVKTAFLNG+L+E +YM QP+GF       +VCKL +SI+G
Sbjct: 534  SIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIYG 593

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWN++F++A+K + F +N +EPCVYKK   + V FLVLYVDDILL+GNDI +L 
Sbjct: 594  LKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQ 653

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K WL   F MKD+GEA+Y+LGIRI+RDR NK I LSQ +YID +L RF M +SKKG  
Sbjct: 654  SVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFI 713

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            P  HGI LS+  CP T  E E M K+PYASA+GS+MYAML TRP
Sbjct: 714  PMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRP 757


>gb|PKI73953.1| hypothetical protein CRG98_005646 [Punica granatum]
          Length = 291

 Score =  280 bits (715), Expect = 1e-91
 Identities = 136/203 (66%), Positives = 164/203 (80%)
 Frame = +2

Query: 2   SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
           SIRI+L+IAAH+DYEVWQMDVKTAFLNG ++E I+M QP GF  K +  +VCKLK+SI+G
Sbjct: 74  SIRIMLAIAAHYDYEVWQMDVKTAFLNGYIEEDIFMDQPKGFESKDKS-KVCKLKRSIYG 132

Query: 182 LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
           LKQ SRSWN +FD+AVKS+GF +N DEPCVYKK   + + FLVLYVDDILLIGNDIGMLT
Sbjct: 133 LKQVSRSWNRRFDEAVKSFGFIKNEDEPCVYKKASGSMIAFLVLYVDDILLIGNDIGMLT 192

Query: 362 SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
           S K WL+  F MKDLGEA+Y+LGIRI+RDR  + I LSQA Y+D +L+RF MQ+S++G  
Sbjct: 193 SVKVWLSNTFSMKDLGEANYILGIRIYRDRPKRLIGLSQALYLDKVLKRFNMQDSRRGLL 252

Query: 542 PFRHGIHLSREHCPKTPSEVEYM 610
           P RHGIHLS+   PKTP E E M
Sbjct: 253 PVRHGIHLSKAMSPKTPEEREKM 275


>gb|KYP68472.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 676

 Score =  291 bits (744), Expect = 3e-91
 Identities = 135/224 (60%), Positives = 176/224 (78%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRILL+IAA++DYE+WQMDVKT FLNG L E +YM QP+GFI     H+VCKL++SI+G
Sbjct: 433  SIRILLAIAAYYDYEIWQMDVKTTFLNGELKEDVYMTQPEGFITSSDHHKVCKLERSIYG 492

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+F++ +K++ F +  +EPCVYK++  + + FL+LYVDDILLIGNDI  L 
Sbjct: 493  LKQASRSWNIQFNKTIKNFDFVRCEEEPCVYKRVSGSTIIFLMLYVDDILLIGNDIPSLQ 552

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K WL++QF MKDLGEA+Y+LGI+I+RDR  + + LSQ+ YI+ IL+R+ M+NSK+G  
Sbjct: 553  STKIWLSEQFSMKDLGEAAYILGIKIYRDRSKRMLGLSQSMYINTILKRYNMENSKRGYL 612

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            P   G+ LSRE CPKT  E   M +VPYASAVG++MY M CT P
Sbjct: 613  PIGTGVTLSREDCPKTLEERTRMNRVPYASAVGAIMYIMTCTCP 656


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  301 bits (770), Expect = 5e-91
 Identities = 141/224 (62%), Positives = 177/224 (79%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRI+L+IAA+FDYE+WQMDVKTAFLNG+L E +YM+QP GF+      ++CKL+KSI+G
Sbjct: 887  SIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYG 946

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD+ +K +GF +N +E CVYKK+  + + FL+LYVDDILLIGNDI ML 
Sbjct: 947  LKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLE 1006

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K  L   F MKDLGEA+Y+LGIRI+RDR  + I LSQ++YID +L+RF M +SKKG  
Sbjct: 1007 SVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFL 1066

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            P  HGI+LS+  CP+T  E   M  VPYASA+GS+MYAMLCTRP
Sbjct: 1067 PMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRP 1110


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  297 bits (761), Expect = 8e-91
 Identities = 142/224 (63%), Positives = 176/224 (78%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRI+L+IAA+FDYE+WQM+VKTAFLNG+ DE +YM QP GF+       +CKL+KSI+G
Sbjct: 807  SIRIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYG 866

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD+ VK+ GF +N +EPCVYKKI  + + FL+LYVDDILLIGNDI ML 
Sbjct: 867  LKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 926

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K  L   F MKDLGEA+Y+LGIRI+RDR  + I LSQ++YID +L+RF MQ+SKKG  
Sbjct: 927  SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKMLKRFNMQDSKKGFL 986

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            P  HGI+L +  CP+T  E   M  +PYASA+GS+MYAMLCTRP
Sbjct: 987  PMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRP 1030


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  298 bits (764), Expect = 9e-91
 Identities = 142/223 (63%), Positives = 176/223 (78%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRI+L+IAA+FDYE+WQMDVKTAFLNG+LDE +YM QP GF+      ++CKL+KSI+ 
Sbjct: 749  SIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYR 808

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD+ VK+ GF +N +EPCVYKKI  + + FL+LYVDDILLIGNDI ML 
Sbjct: 809  LKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 868

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K  L   F MKDLGEA+Y+LGIRI+RDR  + I LSQ++YID +L+RF MQ+SKKG  
Sbjct: 869  SVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 928

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTR 670
            P  HGI+L +  CP+T  E   M  +PYASA+GS+MYAMLCTR
Sbjct: 929  PMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTR 971


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  297 bits (761), Expect = 9e-91
 Identities = 142/224 (63%), Positives = 176/224 (78%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRI+L+IAA+FDYE+WQM+VKTAFLNG+ DE +YM QP GF+       +CKL+KSI+G
Sbjct: 817  SIRIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYG 876

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD+ VK+ GF +N +EPCVYKKI  + + FL+LYVDDILLIGNDI ML 
Sbjct: 877  LKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 936

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K  L   F MKDLGEA+Y+LGIRI+RDR  + I LSQ++YID +L+RF MQ+SKKG  
Sbjct: 937  SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKMLKRFNMQDSKKGFL 996

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
            P  HGI+L +  CP+T  E   M  +PYASA+GS+MYAMLCTRP
Sbjct: 997  PMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRP 1040


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  298 bits (764), Expect = 2e-90
 Identities = 142/223 (63%), Positives = 176/223 (78%)
 Frame = +2

Query: 2    SIRILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFG 181
            SIRI+L+IAA+FDYE+WQMDVKTAFLNG+LDE +YM QP GF+      ++CKL+KSI+ 
Sbjct: 836  SIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYR 895

Query: 182  LKQASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLT 361
            LKQASRSWNI+FD+ VK+ GF +N +EPCVYKKI  + + FL+LYVDDILLIGNDI ML 
Sbjct: 896  LKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 955

Query: 362  SAKCWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQT 541
            S K  L   F MKDLGEA+Y+LGIRI+RDR  + I LSQ++YID +L+RF MQ+SKKG  
Sbjct: 956  SVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFL 1015

Query: 542  PFRHGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTR 670
            P  HGI+L +  CP+T  E   M  +PYASA+GS+MYAMLCTR
Sbjct: 1016 PMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTR 1058


>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 649

 Score =  287 bits (735), Expect = 3e-90
 Identities = 136/221 (61%), Positives = 170/221 (76%)
 Frame = +2

Query: 11  ILLSIAAHFDYEVWQMDVKTAFLNGSLDERIYMMQPDGFIQKGQEHRVCKLKKSIFGLKQ 190
           I+L+IA +F+Y++WQMDVKTAFLNG+LDE +YM QP GF+      R+CKL+KSI+GLKQ
Sbjct: 267 IVLAIATYFNYKIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKRICKLQKSIYGLKQ 326

Query: 191 ASRSWNIKFDQAVKSYGFDQNLDEPCVYKKIKDNKVTFLVLYVDDILLIGNDIGMLTSAK 370
           ASRSW I FD+ VK  GF +N +EPCVYKKI  + + FL+LYVDDILLIGNDI ML S K
Sbjct: 327 ASRSWKICFDEVVKVLGFVKNEEEPCVYKKISGSTLVFLILYVDDILLIGNDIPMLESVK 386

Query: 371 CWLAQQFDMKDLGEASYVLGIRIFRDRKNKRIALSQASYIDNILERFAMQNSKKGQTPFR 550
             L   F MKDLGEA+Y+LGIRI+RDR  + I LSQ++YID +L+RF MQ+SKKG  P  
Sbjct: 387 TSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMS 446

Query: 551 HGIHLSREHCPKTPSEVEYMKKVPYASAVGSLMYAMLCTRP 673
           HGI+L +  CP+T  E   M  +PYASA+GS++Y MLCTRP
Sbjct: 447 HGINLGKNQCPQTTDERNKMSVIPYASAIGSIVYGMLCTRP 487