BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00029833
         (655 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KNA03723.1| hypothetical protein SOVF_206380 [Spinacia oleracea]   110   8e-26
gb|PNX86003.1| retrotransposon protein [Trifolium pratense]           110   1e-24
gb|PKA45938.1| Retrovirus-related Pol polyprotein from transposo...   103   5e-24
gb|PKA65558.1| Retrovirus-related Pol polyprotein from transposo...   105   2e-23
gb|PKI68060.1| hypothetical protein CRG98_011656 [Punica granatum]    100   1e-22
gb|PKA50942.1| Retrovirus-related Pol polyprotein from transposo...    99   3e-22
gb|KYP50175.1| Copia protein [Cajanus cajan]                          100   7e-22
gb|KYP67377.1| Copia protein [Cajanus cajan]                           94   1e-21
gb|KYP42852.1| Copia protein [Cajanus cajan]                           94   1e-21
gb|PKA46819.1| Retrovirus-related Pol polyprotein from transposo...    97   2e-21
gb|KYP58999.1| Copia protein [Cajanus cajan]                           94   2e-21
gb|KYP67539.1| Copia protein [Cajanus cajan]                           94   3e-21
gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposo...   100   5e-21
gb|KFZ04609.1| hypothetical protein V502_10021, partial [Pseudog...    97   2e-20
gb|PKA55297.1| Retrovirus-related Pol polyprotein from transposo...    99   2e-20
gb|KYP52896.1| Retrovirus-related Pol polyprotein from transposo...    93   3e-20
gb|KYP73707.1| Copia protein, partial [Cajanus cajan]                  94   3e-20
gb|KYP69002.1| Copia protein [Cajanus cajan]                           93   3e-20
emb|CAN66630.1| hypothetical protein VITISV_013578 [Vitis vinifera]    94   4e-20
gb|KYP67503.1| Retrovirus-related Pol polyprotein from transposo...    94   4e-20

>gb|KNA03723.1| hypothetical protein SOVF_206380 [Spinacia oleracea]
          Length = 250

 Score =  110 bits (274), Expect = 8e-26
 Identities = 52/78 (66%), Positives = 62/78 (79%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           ++Q  + PTII+CDNMS IAM KNPVFH+R+KHIE+RHHFIR LV  QEI+L+F  T EQ
Sbjct: 173 LRQPTEDPTIIYCDNMSAIAMKKNPVFHSRTKHIEIRHHFIRELVEKQEIELQFCKTGEQ 232

Query: 181 LADGFTKAVSLEKMEQFR 234
           LAD  TKA+S EK  QFR
Sbjct: 233 LADILTKAISTEKFIQFR 250


>gb|PNX86003.1| retrotransposon protein [Trifolium pratense]
          Length = 490

 Score =  110 bits (276), Expect = 1e-24
 Identities = 52/85 (61%), Positives = 67/85 (78%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           +QQ  + PT IFCDN S I+M+KNPVFH RSKHIELRH++IR +V  +EI LE++ T +Q
Sbjct: 406 LQQKVEDPTPIFCDNQSAISMSKNPVFHGRSKHIELRHNYIRDMVQKKEIYLEYIKTTKQ 465

Query: 181 LADGFTKAVSLEKMEQFRKSVRITN 255
            AD  TKAVSLEK+EQF+  ++ITN
Sbjct: 466 PADVLTKAVSLEKLEQFKDIMKITN 490


>gb|PKA45938.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 195

 Score =  103 bits (258), Expect = 5e-24
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           +QQ Q   T IFCDN +TI+MTKNPVFH R+KHIELRHHFIR  V    I+L++++T EQ
Sbjct: 106 LQQHQSCATEIFCDNKATISMTKNPVFHGRTKHIELRHHFIRDAVAKGVIELKYISTNEQ 165

Query: 181 LADGFTKAVSLEKMEQFRKSVRI 249
           +ADGFTKA+S  K  +FR S+ +
Sbjct: 166 VADGFTKALSPAKFLKFRDSIGV 188


>gb|PKA65558.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 317

 Score =  105 bits (261), Expect = 2e-23
 Identities = 51/85 (60%), Positives = 65/85 (76%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q Q+ PT+I+CDNMS IAM+KN V HAR+KHIELR HFIR LV   EIQLEF++T EQ
Sbjct: 233 IGQKQEDPTVIYCDNMSAIAMSKNLVLHARTKHIELRLHFIRELVQKGEIQLEFLSTLEQ 292

Query: 181 LADGFTKAVSLEKMEQFRKSVRITN 255
            AD  TKAV+ EK E+ +  +++TN
Sbjct: 293 PADMLTKAVTAEKFEKHKGQLKLTN 317


>gb|PKI68060.1| hypothetical protein CRG98_011656 [Punica granatum]
          Length = 212

 Score =  100 bits (250), Expect = 1e-22
 Identities = 50/76 (65%), Positives = 59/76 (77%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           +Q+ ++ PT+IFCDNMS +AMTK+PVFHARSKHIEL HHFIR LVN  EI LEF+ T EQ
Sbjct: 138 LQRKEEEPTVIFCDNMS-VAMTKSPVFHARSKHIELHHHFIRDLVNKGEICLEFIGTNEQ 196

Query: 181 LADGFTKAVSLEKMEQ 228
            AD   K VS EK E+
Sbjct: 197 PADVLMKPVSKEKFEK 212


>gb|PKA50942.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 199

 Score = 99.4 bits (246), Expect = 3e-22
 Identities = 49/87 (56%), Positives = 63/87 (72%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q Q+  T IFCDN STIAMTKNPVFH R+KHI++R HFIR LV + EIQL++ +T EQ
Sbjct: 106 LHQRQEGATEIFCDNKSTIAMTKNPVFHGRTKHIDIRLHFIRDLVANNEIQLKYCSTHEQ 165

Query: 181 LADGFTKAVSLEKMEQFRKSVRITN*E 261
           +AD  TK++S EK   FR  + + N E
Sbjct: 166 VADILTKSLSREKFTYFRSRLGVCNFE 192


>gb|KYP50175.1| Copia protein [Cajanus cajan]
          Length = 309

 Score =  100 bits (250), Expect = 7e-22
 Identities = 48/93 (51%), Positives = 65/93 (69%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + + QD PT I+CDN STIAMTKNP+ H+R+KHI +++HFIR     +EI++E+  TKEQ
Sbjct: 218 IGEQQDGPTTIYCDNKSTIAMTKNPIHHSRTKHIAIKYHFIREAETTREIKMEYCKTKEQ 277

Query: 181 LADGFTKAVSLEKMEQFRKSVRITN*EGVLKIC 279
           +AD FTKA+   + EQFR  +      GV KIC
Sbjct: 278 VADIFTKALPRARFEQFRTMI------GVRKIC 304


>gb|KYP67377.1| Copia protein [Cajanus cajan]
          Length = 86

 Score = 94.4 bits (233), Expect = 1e-21
 Identities = 42/79 (53%), Positives = 60/79 (75%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q Q+TPT+IFCDN STIA+ KNPVFH RSKHI++R H IR LV ++E+ +E+  T+EQ
Sbjct: 1   MHQKQNTPTVIFCDNKSTIALCKNPVFHGRSKHIDIRFHKIRELVAEKEVAIEYCPTEEQ 60

Query: 181 LADGFTKAVSLEKMEQFRK 237
           +AD FTK + +E   + ++
Sbjct: 61  VADIFTKPLKVELFYKLKR 79


>gb|KYP42852.1| Copia protein [Cajanus cajan]
          Length = 90

 Score = 94.4 bits (233), Expect = 1e-21
 Identities = 42/79 (53%), Positives = 60/79 (75%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q Q+TPT+IFCDN STIA+ KNPVFH RSKHI++R H IR LV ++E+ +E+  T+EQ
Sbjct: 5   MHQKQNTPTVIFCDNKSTIALCKNPVFHGRSKHIDIRFHKIRELVAEKEVAIEYCPTEEQ 64

Query: 181 LADGFTKAVSLEKMEQFRK 237
           +AD FTK + +E   + ++
Sbjct: 65  VADIFTKPLKVELFYKLKR 83


>gb|PKA46819.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 200

 Score = 97.4 bits (241), Expect = 2e-21
 Identities = 45/94 (47%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q Q+  T +FCDN +TIA+TKNP+FH R+KH++++HHFIR L  +  + L+F NT EQ
Sbjct: 106 LHQMQEDATNVFCDNKATIALTKNPIFHGRTKHVDIKHHFIRELTTESIVDLKFCNTNEQ 165

Query: 181 LADGFTKAVSLEKMEQFRKSVRITN*E--GVLKI 276
           +AD  TKA+  +K   FR S+ + N E  G+L+I
Sbjct: 166 VADILTKALPYKKFVYFRTSMGVCNFESRGMLEI 199


>gb|KYP58999.1| Copia protein [Cajanus cajan]
          Length = 86

 Score = 94.0 bits (232), Expect = 2e-21
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q QDTPT+IFCDN STIA+ KNPVFH RSKH ++R H IR LV ++E+ +E+  T+EQ
Sbjct: 1   MHQKQDTPTVIFCDNKSTIALCKNPVFHGRSKHTDIRFHKIRELVVEKEVAIEYCPTEEQ 60

Query: 181 LADGFTKAVSLEKMEQFRK 237
           +AD FTK + +E   + ++
Sbjct: 61  VADIFTKPLKVELFYKLKR 79


>gb|KYP67539.1| Copia protein [Cajanus cajan]
          Length = 86

 Score = 93.6 bits (231), Expect = 3e-21
 Identities = 42/84 (50%), Positives = 60/84 (71%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q QD PT+IFCDN S IA+ KNPVFH RSKHI++R H IR LV ++E+ + + +T+EQ
Sbjct: 1   MHQKQDNPTVIFCDNKSAIAICKNPVFHERSKHIDIRFHKIRELVTEKEVLINYCHTEEQ 60

Query: 181 LADGFTKAVSLEKMEQFRKSVRIT 252
           +AD FTK +  E   + +K + +T
Sbjct: 61  IADIFTKPLKAELFYKLKKMLGMT 84


>gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 515

 Score =  100 bits (250), Expect = 5e-21
 Identities = 48/93 (51%), Positives = 65/93 (69%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + + QD PT I+CDN STIAMTKNP+ H+R+KHI +++HFIR     +EI++E+  TKEQ
Sbjct: 424 IGEQQDGPTTIYCDNKSTIAMTKNPIHHSRTKHIAIKYHFIREAETTREIKMEYCKTKEQ 483

Query: 181 LADGFTKAVSLEKMEQFRKSVRITN*EGVLKIC 279
           +AD FTKA+   + EQFR  +      GV KIC
Sbjct: 484 VADIFTKALPRARFEQFRTMI------GVRKIC 510


>gb|KFZ04609.1| hypothetical protein V502_10021, partial [Pseudogymnoascus sp. VKM
           F-4520 (FW-2644)]
          Length = 328

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 42/73 (57%), Positives = 57/73 (78%)
 Frame = +1

Query: 25  TIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQLADGFTKA 204
           TIIFCDN   IA+ KNP FH+R KHIE++HHF+R  ++D  IQLE+VNT+ Q+ADG TKA
Sbjct: 251 TIIFCDNQGAIALVKNPQFHSRMKHIEIQHHFVREKMSDGAIQLEYVNTESQVADGLTKA 310

Query: 205 VSLEKMEQFRKSV 243
           +   + E+FRK++
Sbjct: 311 LDKGRFERFRKAI 323


>gb|PKA55297.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 623

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 44/95 (46%), Positives = 65/95 (68%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q Q+  T +FCDN +TIA+TKNP+FH R+KH++++HHFIR L  +  + L+F NT EQ
Sbjct: 525 LHQKQEGATNVFCDNKATIALTKNPIFHGRTKHVDIKHHFIRELTTESIVDLKFCNTNEQ 584

Query: 181 LADGFTKAVSLEKMEQFRKSVRITN*EGVLKICNL 285
           +AD  TKA+S +K   FR S+ + N E    + N+
Sbjct: 585 VADILTKALSYKKFVYFRTSMEVCNFESREDVGNI 619


>gb|KYP52896.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 146

 Score = 92.8 bits (229), Expect = 3e-20
 Identities = 41/76 (53%), Positives = 57/76 (75%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + + QD PT+I+CDN STIAMTKNP+ H R+KHI +++HFIR     ++IQLE+ +T+ Q
Sbjct: 70  MSEQQDGPTVIYCDNKSTIAMTKNPIHHQRTKHIAIKYHFIREAETTKQIQLEYCSTENQ 129

Query: 181 LADGFTKAVSLEKMEQ 228
           +AD FTKA+   K EQ
Sbjct: 130 VADIFTKALPRAKFEQ 145


>gb|KYP73707.1| Copia protein, partial [Cajanus cajan]
          Length = 175

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 42/84 (50%), Positives = 60/84 (71%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q QD PT+IFCDN S IA+ KNPVFH RSKHI++R H IR LV ++E+ + + +T+EQ
Sbjct: 90  MHQKQDNPTVIFCDNKSAIAICKNPVFHERSKHIDIRFHKIRELVTEKEVLINYCHTEEQ 149

Query: 181 LADGFTKAVSLEKMEQFRKSVRIT 252
           +AD FTK +  E   + +K + +T
Sbjct: 150 IADIFTKPLKAELFYKLKKMLGMT 173


>gb|KYP69002.1| Copia protein [Cajanus cajan]
          Length = 166

 Score = 93.2 bits (230), Expect = 3e-20
 Identities = 42/84 (50%), Positives = 62/84 (73%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + + QD PTII+CDN STIAMTKNPV H R+KHI +++HFI+     ++IQ E+ +T++Q
Sbjct: 75  MSEQQDGPTIIYCDNRSTIAMTKNPVHHQRTKHIAIKYHFIKEAETTKQIQPEYCSTEDQ 134

Query: 181 LADGFTKAVSLEKMEQFRKSVRIT 252
           +A+ FTKA+   K EQ +  +R+T
Sbjct: 135 VANIFTKALPRVKFEQLQAMLRVT 158


>emb|CAN66630.1| hypothetical protein VITISV_013578 [Vitis vinifera]
          Length = 200

 Score = 94.0 bits (232), Expect = 4e-20
 Identities = 41/87 (47%), Positives = 61/87 (70%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q  + PT+I+CDN + IAMTKNP +H R+KH+++R HFIR LV + ++ L++ NT EQ
Sbjct: 107 INQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRBLVVEGKVVLQYCNTNEQ 166

Query: 181 LADGFTKAVSLEKMEQFRKSVRITN*E 261
           +AD  TKA+S +K   FR  + + N E
Sbjct: 167 VADVLTKALSRDKHVYFRSKLGVCNFE 193


>gb|KYP67503.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 187

 Score = 93.6 bits (231), Expect = 4e-20
 Identities = 42/84 (50%), Positives = 60/84 (71%)
 Frame = +1

Query: 1   VQQSQDTPTIIFCDNMSTIAMTKNPVFHARSKHIELRHHFIRSLVNDQEIQLEFVNTKEQ 180
           + Q QD PT+IFCDN S IA+ KNPVFH RSKHI++R H IR LV ++E+ + + +T+EQ
Sbjct: 102 MHQKQDNPTVIFCDNKSAIAICKNPVFHERSKHIDIRFHKIRELVTEKEVLINYCHTEEQ 161

Query: 181 LADGFTKAVSLEKMEQFRKSVRIT 252
           +AD FTK +  E   + +K + +T
Sbjct: 162 IADIFTKPLKAELFYKLKKMLGMT 185