BLASTX nr result
ID: Rehmannia29_contig00029783
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00029783
(1031 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011080605.1| DNA-directed RNA polymerase III subunit rpc6... 336 e-112
ref|XP_020550620.1| DNA-directed RNA polymerase III subunit RPC6... 327 e-109
gb|PIN15632.1| RNA polymerase III, subunit C34 [Handroanthus imp... 325 e-108
ref|XP_022844231.1| DNA-directed RNA polymerase III subunit RPC6... 315 e-104
gb|KZV45239.1| DNA-directed RNA polymerase III subunit rpc6-like... 303 1e-99
ref|XP_022844239.1| DNA-directed RNA polymerase III subunit rpc6... 298 7e-98
ref|XP_012843484.1| PREDICTED: DNA-directed RNA polymerase III s... 295 2e-96
emb|CDP07151.1| unnamed protein product [Coffea canephora] 277 5e-88
gb|PIN18605.1| RNA polymerase III, subunit C34 [Handroanthus imp... 258 3e-82
gb|PHU21484.1| hypothetical protein BC332_06591 [Capsicum chinense] 254 1e-80
ref|XP_016566434.1| PREDICTED: DNA-directed RNA polymerase III s... 254 1e-80
gb|PHT38570.1| hypothetical protein CQW23_22143 [Capsicum baccatum] 254 2e-80
ref|XP_016475504.1| PREDICTED: DNA-directed RNA polymerase III s... 253 7e-80
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 251 2e-79
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s... 250 5e-79
ref|XP_016567955.1| PREDICTED: DNA-directed RNA polymerase III s... 250 5e-79
ref|XP_016567954.1| PREDICTED: DNA-directed RNA polymerase III s... 250 8e-79
ref|XP_019235503.1| PREDICTED: DNA-directed RNA polymerase III s... 249 1e-78
gb|PHU22197.1| hypothetical protein BC332_07304 [Capsicum chinense] 249 2e-78
ref|XP_009620517.1| PREDICTED: DNA-directed RNA polymerase III s... 249 2e-78
>ref|XP_011080605.1| DNA-directed RNA polymerase III subunit rpc6-like [Sesamum indicum]
Length = 239
Score = 336 bits (861), Expect = e-112
Identities = 175/240 (72%), Positives = 195/240 (81%), Gaps = 2/240 (0%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTK 639
MSR V+PS LKRKRPET PGLVDAE AILN IK KKDLGI R+IKQ TKL D+VV K
Sbjct: 1 MSRRPVNPS-LKRKRPETDSPGLVDAERAILNSIKGKKDLGIWARDIKQETKLTDHVVNK 59
Query: 638 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 459
S+KSLLAK LIKEVVNIQNK KK YMAVEFEPSKEISGGEWY +G LDK+LI+ LK +CF
Sbjct: 60 SLKSLLAKKLIKEVVNIQNKGKKHYMAVEFEPSKEISGGEWYVDGNLDKELINVLKQLCF 119
Query: 458 RYMRMQKVVTLERVHDLLKK--VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
RY+R QKV TLE V++ LKK VVTFDIS+QQV E IEVKSTGLGDY+SI
Sbjct: 120 RYLRTQKVATLEGVYNELKKNRVVTFDISNQQVSEILNSMVLDNDLIEVKSTGLGDYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
PIG CYR+A AGVAKGPRMGAFA+IPCGACPRISLCTP+GVI+P CV+Y KWL+I+F
Sbjct: 180 PIGTVCYRIASAAGVAKGPRMGAFASIPCGACPRISLCTPNGVISPGTCVYYTKWLSIDF 239
>ref|XP_020550620.1| DNA-directed RNA polymerase III subunit RPC6-like [Sesamum indicum]
ref|XP_020550621.1| DNA-directed RNA polymerase III subunit RPC6-like [Sesamum indicum]
Length = 239
Score = 327 bits (838), Expect = e-109
Identities = 172/240 (71%), Positives = 192/240 (80%), Gaps = 2/240 (0%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTK 639
MSRSLVSPS LKRKRPET PGL+DAE AIL+ IK KKDLG R+IKQ TKL D+VV K
Sbjct: 1 MSRSLVSPS-LKRKRPETGPPGLIDAERAILDSIKGKKDLGNWARDIKQETKLTDHVVNK 59
Query: 638 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 459
S+KSLLAK LIKEVVNIQNK KK YM+VEFEPSKEISGGEWY +G LDK+LI+ LK +C
Sbjct: 60 SLKSLLAKKLIKEVVNIQNKGKKHYMSVEFEPSKEISGGEWYVDGNLDKELINILKQLCL 119
Query: 458 RYMRMQKVVTLERVHDLLKK--VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
RY+R+QKV LE VH+ LKK VVTF+IS QQVGE IEVKSTGLGDY+SI
Sbjct: 120 RYLRVQKVAILEGVHNDLKKNRVVTFEISCQQVGEILNSMVLDNDIIEVKSTGLGDYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
PIG CYR A GAG KGPR+GAFAT+ GACPRISLCTPDGVI+PS CV+Y KWLNI+F
Sbjct: 180 PIGTICYRFANGAGAGKGPRLGAFATVRFGACPRISLCTPDGVISPSTCVYYTKWLNIDF 239
>gb|PIN15632.1| RNA polymerase III, subunit C34 [Handroanthus impetiginosus]
Length = 240
Score = 325 bits (833), Expect = e-108
Identities = 168/240 (70%), Positives = 186/240 (77%), Gaps = 2/240 (0%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTK 639
MSRSL SPSSLKRKRPE GLVDAE A+LN+IKSKKDLGI +I + T L V+ K
Sbjct: 1 MSRSLGSPSSLKRKRPEKDPTGLVDAERAVLNVIKSKKDLGIWAGDIAKDTNLTVPVIQK 60
Query: 638 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 459
S+KSLL K LIKEVVNIQNK KK YMAVEFEPSKEISGGEWY NG LDK+ I+ LK +C
Sbjct: 61 SIKSLLTKKLIKEVVNIQNKGKKHYMAVEFEPSKEISGGEWYVNGNLDKEFINVLKQLCL 120
Query: 458 RYMRMQKVVTLERVHDLLKK--VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
RYM QKV TLE VH+ LKK V+ F ISSQQVGE IEVKSTGLG+Y+SI
Sbjct: 121 RYMHRQKVATLEGVHNELKKSQVLKFPISSQQVGEILYSLVLDNEIIEVKSTGLGEYHSI 180
Query: 284 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
PIG CYRVA G G KGPR+GAFA+IPCGACPRISLCTPDGVI+PS CV+Y KWLNI+F
Sbjct: 181 PIGTVCYRVASGTGAGKGPRIGAFASIPCGACPRISLCTPDGVISPSTCVYYNKWLNIDF 240
>ref|XP_022844231.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844232.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844233.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844234.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844235.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844236.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844237.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
ref|XP_022844238.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
europaea var. sylvestris]
Length = 239
Score = 315 bits (806), Expect = e-104
Identities = 167/240 (69%), Positives = 190/240 (79%), Gaps = 2/240 (0%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTK 639
MSRSL + SSLKRKRPE GLVDAE AILN IKSKKDLGI VR+IK TKL D+VV K
Sbjct: 1 MSRSLET-SSLKRKRPEVDPLGLVDAERAILNAIKSKKDLGIWVRDIKHETKLTDHVVNK 59
Query: 638 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 459
S+KSLL + LIKEVVNIQ K KK YMAVEFEPSKEISGG WY +G LDK+LI+ LK +C
Sbjct: 60 SLKSLLTRKLIKEVVNIQYKGKKHYMAVEFEPSKEISGGVWYVDGNLDKELINVLKQLCL 119
Query: 458 RYMRMQKVVTLERVHDLLKK--VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
R +R+QKV T+ERVH+ LKK VVTF+IS QQV E IEVKSTGLG+YYSI
Sbjct: 120 RCIRVQKVATIERVHEDLKKQRVVTFEISIQQVSEILNSMVLDNEIIEVKSTGLGEYYSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
PIG +CYR GA VAKG ++GAFA+IPCGACPRISLCTPDG+I+PS CV+Y KWLNI+F
Sbjct: 180 PIGTSCYRFDSGALVAKGSKVGAFASIPCGACPRISLCTPDGIISPSTCVYYTKWLNIDF 239
>gb|KZV45239.1| DNA-directed RNA polymerase III subunit rpc6-like [Dorcoceras
hygrometricum]
Length = 239
Score = 303 bits (775), Expect = 1e-99
Identities = 156/240 (65%), Positives = 187/240 (77%), Gaps = 2/240 (0%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTK 639
MSRSL PS+ KRKRPET P LVDAE AILN IKSKKD GI +R+IK TKL D+VV K
Sbjct: 1 MSRSLGGPSA-KRKRPETDAPRLVDAELAILNSIKSKKDSGIWIRDIKLDTKLTDHVVNK 59
Query: 638 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 459
S+KSL+AK L+KEVVNIQ K KK YMAVEFEPSKEI+GGEWY NG LDK+LI+AL+ +C
Sbjct: 60 SLKSLIAKKLVKEVVNIQYKGKKHYMAVEFEPSKEITGGEWYTNGNLDKELINALQRLCL 119
Query: 458 RYMRMQKVVTLERVHDLLKK--VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
+YM Q+V TL+ V + LK+ VV F++S+QQV E IEVKSTGLGDY+SI
Sbjct: 120 KYMMAQRVATLQGVQNELKRSGVVNFEVSAQQVSEILNSMVLDDQIIEVKSTGLGDYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
PIG CYR A AG+AKG ++GAFA+ PCGACPRISLCT +G+I PS+CV+Y KWL+I+F
Sbjct: 180 PIGTICYRTASVAGIAKGAKVGAFASTPCGACPRISLCTSEGLITPSSCVYYSKWLDIDF 239
>ref|XP_022844239.1| DNA-directed RNA polymerase III subunit rpc6-like isoform X2 [Olea
europaea var. sylvestris]
Length = 231
Score = 298 bits (763), Expect = 7e-98
Identities = 160/232 (68%), Positives = 182/232 (78%), Gaps = 2/232 (0%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTK 639
MSRSL + SSLKRKRPE GLVDAE AILN IKSKKDLGI VR+IK TKL D+VV K
Sbjct: 1 MSRSLET-SSLKRKRPEVDPLGLVDAERAILNAIKSKKDLGIWVRDIKHETKLTDHVVNK 59
Query: 638 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 459
S+KSLL + LIKEVVNIQ K KK YMAVEFEPSKEISGG WY +G LDK+LI+ LK +C
Sbjct: 60 SLKSLLTRKLIKEVVNIQYKGKKHYMAVEFEPSKEISGGVWYVDGNLDKELINVLKQLCL 119
Query: 458 RYMRMQKVVTLERVHDLLKK--VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
R +R+QKV T+ERVH+ LKK VV F+IS QQV E IEVKSTGLG+YYSI
Sbjct: 120 RCIRVQKVATIERVHEDLKKQRVVMFEISIQQVSEILNSMVLDNEIIEVKSTGLGEYYSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTPDGVIAPSNCVHY 129
PIG +CYR GA VAKG ++GAFA+IPCGACPRISLCTPDG+I+PS CV+Y
Sbjct: 180 PIGTSCYRFDSGALVAKGSKVGAFASIPCGACPRISLCTPDGIISPSTCVYY 231
>ref|XP_012843484.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6
[Erythranthe guttata]
gb|EYU32313.1| hypothetical protein MIMGU_mgv1a012840mg [Erythranthe guttata]
Length = 238
Score = 295 bits (754), Expect = 2e-96
Identities = 150/235 (63%), Positives = 184/235 (78%), Gaps = 3/235 (1%)
Frame = -1
Query: 800 SPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTKSVKSLL 621
S ++LKR+RP T GL+D+E A+LN IKSK ++GI R+IK T L D VV+KSVKSL+
Sbjct: 4 SNANLKRRRPGTDESGLIDSERAVLNSIKSKGNMGIWTRDIKLETNLTDPVVSKSVKSLM 63
Query: 620 AKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQ 441
AK LIKEVVNIQNK KK YM+VEFEPSKEISGGEWY+NG LDK+LI A++ +C R++R Q
Sbjct: 64 AKNLIKEVVNIQNKGKKHYMSVEFEPSKEISGGEWYSNGALDKELIKAVQDMCLRFLRAQ 123
Query: 440 KVVTLERVHDLLKK--VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSIPIGKTC 267
KV T+E VH+ LKK V+TF+ S +QV + IEVKS+GLGDY+SIPIG C
Sbjct: 124 KVTTIEGVHNDLKKSRVLTFEPSREQVVDILNSMVLDNNIIEVKSSGLGDYHSIPIGTVC 183
Query: 266 YRVAGGAGVAK-GPRMGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
YRVA GAGVAK GP+ G FA+IPCGACPRIS+CTPDG I+P+ CV+Y KWLN+EF
Sbjct: 184 YRVASGAGVAKGGPKKGGFASIPCGACPRISVCTPDGPISPATCVYYTKWLNVEF 238
>emb|CDP07151.1| unnamed protein product [Coffea canephora]
Length = 334
Score = 277 bits (708), Expect = 5e-88
Identities = 146/266 (54%), Positives = 186/266 (69%), Gaps = 4/266 (1%)
Frame = -1
Query: 899 SPANNFHPTSFCIVVRGTHSW*PDFSGMSRSLVSPSSLKRKRPETQLPG--LVDAEHAIL 726
SP N H +SF MSRS+ + SSLKRKRPE+ LVDA+ A+
Sbjct: 82 SPEPNLHQSSFVF-------------RMSRSM-NASSLKRKRPESSSANGSLVDADRAVF 127
Query: 725 NLIKSKKDLGICVREIKQGTKLADNVVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFE 546
N+IKSK+D+GI R+IK TKLAD VV KS+KSLL+K LIKE+VNI+NK +K YMA EFE
Sbjct: 128 NVIKSKEDMGIWTRDIKFETKLADTVVNKSLKSLLSKKLIKEIVNIKNKGRKHYMAAEFE 187
Query: 545 PSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQKVVTLERVHDLL--KKVVTFDISSQ 372
PSKE++GG WY +G LDK+LI LK +C + + +KV T+E V+D L KV TFD ++Q
Sbjct: 188 PSKEVTGGAWYVDGNLDKELIGVLKGLCLKIINSKKVATVEGVYDFLTKSKVTTFDCTNQ 247
Query: 371 QVGEXXXXXXXXXXXIEVKSTGLGDYYSIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGA 192
Q+ E IEVKSTGLG+Y+SIPIG CYR+A GAG+ + ++GA A+IPCG
Sbjct: 248 QIAEVLNSMVLDNEVIEVKSTGLGEYHSIPIGTVCYRIAKGAGLGESLKIGAMASIPCGM 307
Query: 191 CPRISLCTPDGVIAPSNCVHYEKWLN 114
CPRIS CTPDGVI+PS CV+Y+KW+N
Sbjct: 308 CPRISQCTPDGVISPSTCVYYQKWMN 333
>gb|PIN18605.1| RNA polymerase III, subunit C34 [Handroanthus impetiginosus]
Length = 230
Score = 258 bits (660), Expect = 3e-82
Identities = 133/235 (56%), Positives = 166/235 (70%)
Frame = -1
Query: 809 SLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTKSVK 630
S V+P SL R+RP+T P VD E AILN+IK +DLGI ++IKQ TKL+ VV KS+
Sbjct: 2 SRVNPPSLNRERPDTVRPRQVDIEEAILNVIKRTEDLGISEKDIKQETKLSPLVVKKSID 61
Query: 629 SLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYM 450
SLL K LIK+VVN+QNK KK YMA EFEPSKEISGG+WY NGEL+K+LI+ L+ C Y+
Sbjct: 62 SLLKKTLIKQVVNVQNKRKKHYMANEFEPSKEISGGKWYINGELNKELIEKLRQFCLTYI 121
Query: 449 RMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSIPIGKT 270
R + + TLE +++ KK +SSQ+ GE +EVKSTGL +Y S PIG
Sbjct: 122 RARNIATLEGINNEWKKKGAEKVSSQEFGEILYLMVLDNDIVEVKSTGLAEYRSFPIGTV 181
Query: 269 CYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
CY V+KGPR+GAFA IPCG CPRISLCTPDGVI+PS C ++ KWL+I+F
Sbjct: 182 CY------SVSKGPRIGAFAAIPCGVCPRISLCTPDGVISPSTCRYFAKWLDIDF 230
>gb|PHU21484.1| hypothetical protein BC332_06591 [Capsicum chinense]
Length = 240
Score = 254 bits (650), Expect = 1e-80
Identities = 127/241 (52%), Positives = 168/241 (69%), Gaps = 3/241 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSRS +++KRKRP P GLVDAE +L++++SKK+LG+ V E+K+ LA +V
Sbjct: 1 MSRSS-DAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIV 59
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ SL+ K LIK+VVNIQNK +K YMAVEFEPS++++GG WY+ G+LDK+ I L+
Sbjct: 60 DKSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDT 119
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
C + + M KV T E +HD LKK + +SQQV E IEVKSTGLG+Y+SI
Sbjct: 120 CLKVIEMMKVATAEGIHDFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIE 108
+G CYR A G + GP+ +G A+IPCGACPRISLCTP+G+I+P CV+Y KWLN E
Sbjct: 180 AVGSVCYRSASGVALGTGPKTIGQMASIPCGACPRISLCTPNGIISPQTCVYYTKWLNFE 239
Query: 107 F 105
F
Sbjct: 240 F 240
>ref|XP_016566434.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566435.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566436.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566437.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566439.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
ref|XP_016566442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum]
gb|PHT38552.1| hypothetical protein CQW23_22125 [Capsicum baccatum]
gb|PHT85505.1| hypothetical protein T459_07611 [Capsicum annuum]
Length = 240
Score = 254 bits (650), Expect = 1e-80
Identities = 127/241 (52%), Positives = 169/241 (70%), Gaps = 3/241 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSRS + +++KRKRP P GLVDAE +L++++SKK+LG+ V E+K+ LA +V
Sbjct: 1 MSRSSEA-AAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIV 59
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ SL+ K LIK+VVNIQNK +K YMAVEFEPS++++GG WY+ G+LDK+ I L+
Sbjct: 60 DKSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDT 119
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
C + + M KV T E +HD LKK + +SQQV E IEVKSTGLG+Y+SI
Sbjct: 120 CLKVIEMMKVATAEGIHDFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIE 108
+G CYR A G + GP+ +G A+IPCGACPRISLCTP+G+I+P CV+Y KWLN E
Sbjct: 180 AVGSVCYRSASGVALGTGPKTIGQMASIPCGACPRISLCTPNGIISPQTCVYYTKWLNFE 239
Query: 107 F 105
F
Sbjct: 240 F 240
>gb|PHT38570.1| hypothetical protein CQW23_22143 [Capsicum baccatum]
Length = 240
Score = 254 bits (649), Expect = 2e-80
Identities = 126/241 (52%), Positives = 169/241 (70%), Gaps = 3/241 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSRS + +++KRKRP P GLVDAE +L++++SKK+LG+ V E+K+ LA +V
Sbjct: 1 MSRSSEA-AAMKRKRPNIDSPTQGLVDAERLVLDVVRSKKNLGVWVAEVKKEANLAPTIV 59
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ SL+ K LIK+VVNIQNK +K YMAVEFEPS++++GG WY+ G+LDK+ I L+
Sbjct: 60 DKSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDT 119
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
C + + M KV T E +HD LKK + +SQQV E IEVKSTGLG+Y+SI
Sbjct: 120 CLKVIEMMKVATAEGIHDFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIE 108
+G CYR A G + GP+ +G A+IPCGACPRISLCTP+G+++P CV+Y KWLN E
Sbjct: 180 AVGSVCYRSASGVALGTGPKTIGQMASIPCGACPRISLCTPNGIVSPQTCVYYTKWLNFE 239
Query: 107 F 105
F
Sbjct: 240 F 240
>ref|XP_016475504.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tabacum]
Length = 240
Score = 253 bits (645), Expect = 7e-80
Identities = 125/241 (51%), Positives = 169/241 (70%), Gaps = 3/241 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSRS + +++KRKRP+ P GL DAEH +L+L+K+KK+LGI V E+K+ L +V
Sbjct: 1 MSRSREA-AAMKRKRPDLDSPTRGLPDAEHVVLSLVKNKKNLGIWVAEVKKEANLPPTLV 59
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ +L+ K LIK+VVNIQNK KK YMAVEFEPS+E++GG WY+ G LDK+ I L+
Sbjct: 60 DKSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDT 119
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
CF+ + + KV T+E +H+ LKK + + QQ+ E IEVKSTGLG+Y+SI
Sbjct: 120 CFKVIELLKVATVEGIHNFLKKRKVVECTGQQIAEILNSMVLDNAIIEVKSTGLGEYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIE 108
P+G CYR + G + GP+ +G A+IPCGACPRIS C+P+GVI+P CV+Y KWLN E
Sbjct: 180 PVGSVCYRTSSGVALGTGPKTIGPMASIPCGACPRISQCSPNGVISPQTCVYYTKWLNTE 239
Query: 107 F 105
F
Sbjct: 240 F 240
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Solanum lycopersicum]
ref|XP_015083473.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Solanum pennellii]
Length = 237
Score = 251 bits (642), Expect = 2e-79
Identities = 129/240 (53%), Positives = 173/240 (72%), Gaps = 2/240 (0%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTK 639
MSRS + ++LKRKRP++ GLVDAE +LN++KSKK+ G+ V ++K+ +A +V K
Sbjct: 1 MSRSSEA-AALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVDK 59
Query: 638 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 459
+ SL+ K LIK+V +IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 458 RYMRMQKVVTLERVHDLLKK-VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSIP 282
+ + M KV T+E +HD LKK V +SQQVGE IEVKSTGLG+Y+SIP
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVECCTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSIP 179
Query: 281 IGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
IG CYR+A GV GP+ +G A+IPCGACPRIS+CTPDG+I+P CV++ KWL+IEF
Sbjct: 180 IGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLDIEF 237
>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Solanum
tuberosum]
Length = 237
Score = 250 bits (639), Expect = 5e-79
Identities = 129/240 (53%), Positives = 171/240 (71%), Gaps = 2/240 (0%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVVTK 639
MSRS + +++KRKR ++ GLVDAE +LN++KSKK+LG+ V ++K+ +A +V K
Sbjct: 1 MSRSSEA-AAMKRKRLDSSTQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPALVDK 59
Query: 638 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 459
+ SL+ K LIK+V IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 458 RYMRMQKVVTLERVHDLLKK-VVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSIP 282
+ + M KV T+E +HD LKK V +SQQVGE IEVKSTGLG+Y+SIP
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVECCTSQQVGEILNSMVLDDAIIEVKSTGLGEYHSIP 179
Query: 281 IGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIEF 105
IG CYR+A G GP+ +G A+IPCGACPRIS+CTPDG+I+P CV+Y KWLNIEF
Sbjct: 180 IGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLNIEF 237
>ref|XP_016567955.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform X2 [Capsicum annuum]
ref|XP_016567956.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform X2 [Capsicum annuum]
Length = 238
Score = 250 bits (639), Expect = 5e-79
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSRS + +++KRKRP P GLVDAE +L++++SKK+LG+ V E+K+ LA +V
Sbjct: 1 MSRSSEA-AAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIV 59
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ SL+ K L+K+VVNIQNK +K YMAVEFEPS++++GG WY+ G+LDK+ I L+
Sbjct: 60 DKSLTSLVKKKLVKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDT 119
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
C + + M KV T E +HD LKK + +SQQV E IEVKSTGLG+Y+SI
Sbjct: 120 CLKVIEMMKVATAEGIHDFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLN 114
+G CYR A GA GP+ +G A+IPCGACPRISLCTP+G+++P CV+Y KWLN
Sbjct: 180 AVGSVCYRSASGAAFGTGPKTIGQMASIPCGACPRISLCTPNGIVSPQTCVYYTKWLN 237
>ref|XP_016567954.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Capsicum annuum]
Length = 250
Score = 250 bits (639), Expect = 8e-79
Identities = 124/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSRS + +++KRKRP P GLVDAE +L++++SKK+LG+ V E+K+ LA +V
Sbjct: 13 MSRSSEA-AAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIV 71
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ SL+ K L+K+VVNIQNK +K YMAVEFEPS++++GG WY+ G+LDK+ I L+
Sbjct: 72 DKSLTSLVKKKLVKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDT 131
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
C + + M KV T E +HD LKK + +SQQV E IEVKSTGLG+Y+SI
Sbjct: 132 CLKVIEMMKVATAEGIHDFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHSI 191
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLN 114
+G CYR A GA GP+ +G A+IPCGACPRISLCTP+G+++P CV+Y KWLN
Sbjct: 192 AVGSVCYRSASGAAFGTGPKTIGQMASIPCGACPRISLCTPNGIVSPQTCVYYTKWLN 249
>ref|XP_019235503.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana attenuata]
gb|OIT25732.1| hypothetical protein A4A49_30765 [Nicotiana attenuata]
Length = 240
Score = 249 bits (637), Expect = 1e-78
Identities = 125/241 (51%), Positives = 167/241 (69%), Gaps = 3/241 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSR L +++KRKRP+ P GL DAE +L+L+K+KK+LGI V E+K+ L +V
Sbjct: 1 MSR-LGEAAAMKRKRPDLDSPTQGLPDAERVVLSLVKNKKNLGIWVAEVKKEANLPPTLV 59
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ +L+ K LIK+VVNIQNK KK YMAVEFEPS+E++GG WY+ G LDK+ I L+
Sbjct: 60 DKSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDT 119
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
C + + + KV T+E +H+ LKK + +SQQ+ E IEVKSTGLG+Y+SI
Sbjct: 120 CLKVIELLKVATVEGIHNFLKKRKVVECTSQQIAEILNSMVLDNGIIEVKSTGLGEYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIE 108
P+G CYR A G + GP+ +G A+IPCGACPRIS C+P+GVI+P CV+Y KWLN E
Sbjct: 180 PVGSVCYRTASGVALGTGPKTIGPMASIPCGACPRISQCSPNGVISPETCVYYTKWLNTE 239
Query: 107 F 105
F
Sbjct: 240 F 240
>gb|PHU22197.1| hypothetical protein BC332_07304 [Capsicum chinense]
Length = 238
Score = 249 bits (636), Expect = 2e-78
Identities = 124/238 (52%), Positives = 166/238 (69%), Gaps = 3/238 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSRS + +++KRKRP P GLVDAE +L++++SKK+LG+ V E+K+ LA +V
Sbjct: 1 MSRSSEA-AAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIV 59
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ SL+ K LIK+VVNIQNK +K YMAVEFEPS++++GG WY+ G+LDK+ I L+
Sbjct: 60 DKSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDT 119
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
C + + M KV T E +HD LKK + +SQQV E IEVKSTGLG+Y+SI
Sbjct: 120 CLKVIEMMKVATAEGIHDFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLN 114
+G CYR A G GP+ +G A+IPCGACPRISLCTP+G+++P CV+Y KWLN
Sbjct: 180 AVGSVCYRSASGVAFGTGPKTIGQMASIPCGACPRISLCTPNGIVSPQTCVYYTKWLN 237
>ref|XP_009620517.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tomentosiformis]
ref|XP_016511458.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tabacum]
Length = 240
Score = 249 bits (636), Expect = 2e-78
Identities = 124/241 (51%), Positives = 169/241 (70%), Gaps = 3/241 (1%)
Frame = -1
Query: 818 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKKDLGICVREIKQGTKLADNVV 645
MSRS + +++KRKRP+ P GL DAE +L+L+K+K++LGI V E+K+ L +V
Sbjct: 1 MSRSREA-TTMKRKRPDLDSPTRGLPDAERVVLSLVKNKRNLGIWVVEVKKEANLPPTLV 59
Query: 644 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 465
KS+ +L+ K LIK+VVNIQNK KK YMAVEFEPS+E++GG WY+ G LDK+ I L+
Sbjct: 60 DKSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDT 119
Query: 464 CFRYMRMQKVVTLERVHDLLKKVVTFDISSQQVGEXXXXXXXXXXXIEVKSTGLGDYYSI 285
CF+ + + KV T+E +H+ LKK + +SQQ+ E IEVKSTGLG+Y+SI
Sbjct: 120 CFKVIELLKVATVEGIHNFLKKRKVVECTSQQIAEILNSMVLDNAIIEVKSTGLGEYHSI 179
Query: 284 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTPDGVIAPSNCVHYEKWLNIE 108
P+G CYR + G + GP+ +G A+IPCGACPRIS C+P+GVI+P CV+Y KWLN E
Sbjct: 180 PVGSVCYRTSSGVALGTGPKTIGPMASIPCGACPRISQCSPNGVISPQTCVYYTKWLNTE 239
Query: 107 F 105
F
Sbjct: 240 F 240