BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00029712
         (889 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011078257.1| probable RNA-dependent RNA polymerase 5 [Ses...   299   2e-90
ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   289   1e-86
ref|XP_012833672.1| PREDICTED: probable RNA-dependent RNA polyme...   274   2e-81
ref|XP_011093632.1| probable RNA-dependent RNA polymerase 5 isof...   231   2e-65
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]   218   5e-61
gb|PIN13666.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i...   203   1e-55
ref|XP_020553693.1| probable RNA-dependent RNA polymerase 5 isof...   153   5e-38
ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polyme...   151   2e-37
ref|XP_016449580.1| PREDICTED: probable RNA-dependent RNA polyme...   151   2e-37
ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polyme...   151   2e-37
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythra...   151   2e-37
ref|XP_019239863.1| PREDICTED: probable RNA-dependent RNA polyme...   149   1e-36
gb|PHT52099.1| hypothetical protein CQW23_06561 [Capsicum baccatum]   139   2e-35
gb|PNT27753.1| hypothetical protein POPTR_007G081300v3 [Populus ...   143   2e-34
ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polyme...   142   2e-34
ref|XP_022930253.1| probable RNA-dependent RNA polymerase 5 isof...   142   3e-34
ref|XP_022930245.1| probable RNA-dependent RNA polymerase 5 isof...   142   3e-34
ref|XP_022930237.1| probable RNA-dependent RNA polymerase 5 isof...   142   3e-34
ref|XP_022930229.1| probable RNA-dependent RNA polymerase 5 isof...   142   3e-34
ref|XP_016474249.1| PREDICTED: probable RNA-dependent RNA polyme...   141   7e-34

>ref|XP_011078257.1| probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1036

 Score =  299 bits (766), Expect = 2e-90
 Identities = 165/277 (59%), Positives = 198/277 (71%), Gaps = 2/277 (0%)
 Frame = +2

Query: 65  MDAST-HQAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKK 241
           MDAS+  Q VRLPE +E II+RIC EKNQPPLK YAR MLAEIGEQA++E+LT +LSSK 
Sbjct: 1   MDASSPDQEVRLPEPVEMIIQRICLEKNQPPLKKYARNMLAEIGEQAALEVLTTVLSSK- 59

Query: 242 TITSFSGYVSYLIKRDYKIEAAKVLSAYGSP-QVSTQTQRMLSPSSISPYISTQKLNGEX 418
           TI SF GYV++L+K+D+  +AA VLSAYGSP Q ST   +    S  +PY        E 
Sbjct: 60  TIRSFGGYVAFLVKKDFPNQAAAVLSAYGSPHQCSTSPNK----SPHTPYY-------ER 108

Query: 419 XXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAEST 598
                             KT  Q+I C LSF++ET EK     + QS L  E RE+ +S 
Sbjct: 109 LRSPVSSFSVDSIPSNLNKTGPQNIRCNLSFENETLEKSCPGARCQSPLPDELREMTDSV 168

Query: 599 TVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITY 778
           T+SQQLM+L++L++RKLFLVLSYIGRQKLEAVV LDGANEI+SMKDLPM  FE+KIW +Y
Sbjct: 169 TISQQLMILSQLQFRKLFLVLSYIGRQKLEAVVNLDGANEIYSMKDLPMNDFEAKIWNSY 228

Query: 779 GQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           G+KFC++SDRSQYL WDS KTH Y CHVC DGSYYFK
Sbjct: 229 GKKFCEESDRSQYLDWDSQKTHHYYCHVCRDGSYYFK 265


>ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
           polymerase 5 [Erythranthe guttata]
          Length = 1040

 Score =  289 bits (739), Expect = 1e-86
 Identities = 155/271 (57%), Positives = 192/271 (70%), Gaps = 1/271 (0%)
 Frame = +2

Query: 80  HQAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFS 259
           +Q +RLP+ +E  I+ IC EKNQPPLK YARKMLAEIGEQASME+LT ILSS + I SFS
Sbjct: 9   NQDIRLPKKVEMTIQTICLEKNQPPLKNYARKMLAEIGEQASMEVLTEILSSNQPIKSFS 68

Query: 260 GYVSYLIKRDYKIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXX 439
           G+VS+++K+DY ++AA VL+AY S   S Q+Q+M SPSS SP+      NGE        
Sbjct: 69  GFVSFMVKKDYPVQAAAVLAAYDSS--SPQSQKMWSPSSTSPHTR----NGENLESPLSR 122

Query: 440 XXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSV-KRQSSLAGEHREVAESTTVSQQL 616
                       T  QS+ C LSF+DETQE RS +    Q S+     EV E  T++QQL
Sbjct: 123 LSMNSITSNLHSTSPQSVGCRLSFEDETQENRSPNCGTSQPSVP----EVKEPITITQQL 178

Query: 617 MVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCD 796
           + LNKLEYRKLFLVLSYIGR+KLE VVT++ A+EI+ M + PM+ FE+KIW  YGQ+F D
Sbjct: 179 ITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIWKKYGQRFYD 238

Query: 797 KSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           +SDRSQYL WDSGKTH+Y CHV +DG YYFK
Sbjct: 239 ESDRSQYLDWDSGKTHVYYCHVYQDGRYYFK 269


>ref|XP_012833672.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Erythranthe
           guttata]
          Length = 953

 Score =  274 bits (700), Expect = 2e-81
 Identities = 150/282 (53%), Positives = 186/282 (65%), Gaps = 7/282 (2%)
 Frame = +2

Query: 65  MDAS-------THQAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTM 223
           MDAS         + VRLPE++ER IKRI  EKNQPPL   ARKML +IGEQ+S+ +L+ 
Sbjct: 1   MDASPSASPSRNEEIVRLPEAVERCIKRIRDEKNQPPLAKSARKMLQQIGEQSSLRILST 60

Query: 224 ILSSKKTITSFSGYVSYLIKRDYKIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQK 403
           ILSS K I SF+G+VS+L+ +D       +L+ + SP++S+      SP +         
Sbjct: 61  ILSSNKPIYSFTGFVSHLVNKDNP----NLLTTHTSPRLSSPPSTSTSPHA--------- 107

Query: 404 LNGEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHRE 583
                                     L+SI  +LSF+DETQEK S  V+ Q SL G+HRE
Sbjct: 108 -----------------------PLRLKSIRSQLSFEDETQEKTSPCVRSQLSLTGQHRE 144

Query: 584 VAESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESK 763
           +  S T+SQQLMVL+KLEYR+LFLVLSYI RQKLEAV+T DGA +I SMK +PM+VFESK
Sbjct: 145 IEHSATISQQLMVLSKLEYRQLFLVLSYIRRQKLEAVITPDGARDISSMKGIPMDVFESK 204

Query: 764 IWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           IW  YGQ+FCDK+DR QYL WDSGKTHIY CHVC+DG YYFK
Sbjct: 205 IWNKYGQRFCDKADRIQYLDWDSGKTHIYYCHVCQDGGYYFK 246


>ref|XP_011093632.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Sesamum
           indicum]
          Length = 1013

 Score =  231 bits (589), Expect = 2e-65
 Identities = 132/280 (47%), Positives = 178/280 (63%), Gaps = 5/280 (1%)
 Frame = +2

Query: 65  MDASTHQAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKT 244
           MD S HQ   LP SIE+ I++IC++++QPP+  YARK+LA+IGE+A+ +LL  I S+++ 
Sbjct: 1   MDGSPHQEAPLPHSIEKTIQKICKDQSQPPISSYARKLLADIGEKAASDLLARI-SNQRI 59

Query: 245 ITSFSGYVSYLIKRDYKIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXX 424
             SFSGY+  L+K+ +                S+ ++R LSPSS SP  ++ K       
Sbjct: 60  TKSFSGYIITLVKKYHPAVVP-----------SSPSKRSLSPSSSSPRNTSLK------- 101

Query: 425 XXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLA-----GEHREVA 589
                           K+ LQ I   LSF+D+ QE R    + Q+S A      E R + 
Sbjct: 102 ----------------KSPLQ-IGRLLSFEDDVQETRGPIFEHQTSTAVELKNSELRGMT 144

Query: 590 ESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIW 769
           +S T+SQQL +L+KLEYRKLFLVLSY GR KLE V+T+DGAN+I   KDLPM +FE+ IW
Sbjct: 145 KSNTISQQLRILSKLEYRKLFLVLSYTGRHKLENVMTVDGANDIFQKKDLPMSIFETAIW 204

Query: 770 ITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
            TYG K+C+KSDRS+YL WD GKTH+Y C+V EDGSY+FK
Sbjct: 205 NTYGNKYCNKSDRSEYLDWDFGKTHLYYCYVHEDGSYHFK 244


>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
          Length = 898

 Score =  218 bits (554), Expect = 5e-61
 Identities = 130/277 (46%), Positives = 166/277 (59%), Gaps = 2/277 (0%)
 Frame = +2

Query: 65  MDASTHQAVRLPESIERIIKRICQEKNQPPLKYYA--RKMLAEIGEQASMELLTMILSSK 238
           MD S+H+ VRLPES+E  I+RI  EK QPPL   +  RKML EIGEQ S++LL +I SSK
Sbjct: 8   MDGSSHEDVRLPESVEAAIERIAVEKQQPPLPRNSDVRKMLREIGEQPSLKLLNIIHSSK 67

Query: 239 KTITSFSGYVSYLIKRDYKIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEX 418
             I SF G+VS L++  Y  +AA + S Y SP  +     + SPSSISP ++    NGE 
Sbjct: 68  TPIKSFGGFVSKLVRTYYPNQAAAIPSPYKSPPPT-----IYSPSSISPNVAR---NGES 119

Query: 419 XXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAEST 598
                              T  Q+I C+LSF+DE  E R+                 ES 
Sbjct: 120 LQSSLSNLQG---------TGFQNISCQLSFEDEALESRN-----------------ESM 153

Query: 599 TVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITY 778
            +S QL+ LNKLE+RKLFL+LSY   QKLE V+T + AN++++ K LPM  FE  IW  +
Sbjct: 154 AISPQLLTLNKLEFRKLFLLLSYANGQKLEDVLTTEEANQVYANKALPMPEFERLIWDKF 213

Query: 779 GQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           G ++C+  DRSQ+L WDSGKTHIY CHV  DGSY FK
Sbjct: 214 GYRYCNGLDRSQHLDWDSGKTHIYNCHVNPDGSYSFK 250


>gb|PIN13666.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
          Length = 1014

 Score =  203 bits (517), Expect = 1e-55
 Identities = 122/277 (44%), Positives = 167/277 (60%), Gaps = 2/277 (0%)
 Frame = +2

Query: 65  MDASTHQAVR--LPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSK 238
           M+AS  +  +  LP+S+E+II  IC +++QP L    R++LAEIGE+A++ELL  I    
Sbjct: 1   MEASPRKEAQCPLPQSVEKIIVDICNDQSQPLLPNAVRRLLAEIGEKAALELLLRIKGQN 60

Query: 239 KTITSFSGYVSYLIKRDYKIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEX 418
            T  SFSGYV  L+K+ +        S + SP  ++  +R LSPS  SP  S  K +   
Sbjct: 61  IT-KSFSGYVITLLKKYHP-------SLFPSPS-NSPNKRPLSPSCSSPNSSPLKKSPP- 110

Query: 419 XXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAEST 598
                                   I    S  DE  + +  +V  +SS  GE +E+    
Sbjct: 111 -----------------------QISRMQSLRDEALDWKGPNVAPESSSTGELKEMTNRA 147

Query: 599 TVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITY 778
           T+S+QL +L+KLEYRKLFLVLSYIGRQKLE V+T+DG N+I + KDL M  FE++IW TY
Sbjct: 148 TISEQLKILSKLEYRKLFLVLSYIGRQKLEDVMTIDGTNDIVNKKDLQMTTFEAEIWKTY 207

Query: 779 GQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           G K+CD+SDR QYL WDSGKT+ Y C+V +DGSY+F+
Sbjct: 208 GNKYCDRSDRRQYLNWDSGKTYFYYCYVHQDGSYHFE 244


>ref|XP_020553693.1| probable RNA-dependent RNA polymerase 5 isoform X2 [Sesamum
           indicum]
          Length = 871

 Score =  153 bits (386), Expect = 5e-38
 Identities = 69/102 (67%), Positives = 85/102 (83%)
 Frame = +2

Query: 584 VAESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESK 763
           + +S T+SQQL +L+KLEYRKLFLVLSY GR KLE V+T+DGAN+I   KDLPM +FE+ 
Sbjct: 1   MTKSNTISQQLRILSKLEYRKLFLVLSYTGRHKLENVMTVDGANDIFQKKDLPMSIFETA 60

Query: 764 IWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           IW TYG K+C+KSDRS+YL WD GKTH+Y C+V EDGSY+FK
Sbjct: 61  IWNTYGNKYCNKSDRSEYLDWDFGKTHLYYCYVHEDGSYHFK 102


>ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
           [Nicotiana sylvestris]
          Length = 1058

 Score =  151 bits (382), Expect = 2e-37
 Identities = 94/280 (33%), Positives = 146/280 (52%), Gaps = 11/280 (3%)
 Frame = +2

Query: 83  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMI--LSSKKTITSF 256
           + ++LP S+E+++ +IC+ + Q P+    R++L  IGE+ S+++L+ I     KKT+   
Sbjct: 15  EVIKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIKKTL--- 71

Query: 257 SGYVSYLIKRDYKIEAAKVL---------SAYGSPQVSTQTQRMLSPSSISPYISTQKLN 409
           SG++ ++ K+ Y+ E  +           S + SPQ+  Q   + SP+S S  ++    N
Sbjct: 72  SGFIVFMAKKYYQSETQQFYQQTPVSSAESFFQSPQI--QRISLSSPNSSSSSVNFSPRN 129

Query: 410 GEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVA 589
           G                     +D  +   ++     + E+ +F       +  E+R  A
Sbjct: 130 GPLFQATVHNNVGDG-------SDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEYRNRA 182

Query: 590 ESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIW 769
               +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FES IW
Sbjct: 183 GIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIW 242

Query: 770 ITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
             YG   C+   R QYL WDSG++H Y CHV  DGSY FK
Sbjct: 243 TKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFK 281


>ref|XP_016449580.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Nicotiana
           tabacum]
          Length = 1060

 Score =  151 bits (382), Expect = 2e-37
 Identities = 94/280 (33%), Positives = 146/280 (52%), Gaps = 11/280 (3%)
 Frame = +2

Query: 83  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMI--LSSKKTITSF 256
           + ++LP S+E+++ +IC+ + Q P+    R++L  IGE+ S+++L+ I     KKT+   
Sbjct: 15  EVIKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIKKTL--- 71

Query: 257 SGYVSYLIKRDYKIEAAKVL---------SAYGSPQVSTQTQRMLSPSSISPYISTQKLN 409
           SG++ ++ K+ Y+ E  +           S + SPQ+  Q   + SP+S S  ++    N
Sbjct: 72  SGFIVFMAKKYYQSETQQFYQQTPVSSAESFFQSPQI--QRISLSSPNSSSSSVNFSPRN 129

Query: 410 GEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVA 589
           G                     +D  +   ++     + E+ +F       +  E+R  A
Sbjct: 130 GPLFQATVHNNDIVGDG-----SDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEYRNRA 184

Query: 590 ESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIW 769
               +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FES IW
Sbjct: 185 GIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIW 244

Query: 770 ITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
             YG   C+   R QYL WDSG++H Y CHV  DGSY FK
Sbjct: 245 TKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFK 283


>ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Nicotiana sylvestris]
          Length = 1060

 Score =  151 bits (382), Expect = 2e-37
 Identities = 94/280 (33%), Positives = 146/280 (52%), Gaps = 11/280 (3%)
 Frame = +2

Query: 83  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMI--LSSKKTITSF 256
           + ++LP S+E+++ +IC+ + Q P+    R++L  IGE+ S+++L+ I     KKT+   
Sbjct: 15  EVIKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIKKTL--- 71

Query: 257 SGYVSYLIKRDYKIEAAKVL---------SAYGSPQVSTQTQRMLSPSSISPYISTQKLN 409
           SG++ ++ K+ Y+ E  +           S + SPQ+  Q   + SP+S S  ++    N
Sbjct: 72  SGFIVFMAKKYYQSETQQFYQQTPVSSAESFFQSPQI--QRISLSSPNSSSSSVNFSPRN 129

Query: 410 GEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVA 589
           G                     +D  +   ++     + E+ +F       +  E+R  A
Sbjct: 130 GPLFQATVHNNDIVGDG-----SDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEYRNRA 184

Query: 590 ESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIW 769
               +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FES IW
Sbjct: 185 GIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIW 244

Query: 770 ITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
             YG   C+   R QYL WDSG++H Y CHV  DGSY FK
Sbjct: 245 TKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFK 283


>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythranthe guttata]
          Length = 878

 Score =  151 bits (381), Expect = 2e-37
 Identities = 68/97 (70%), Positives = 83/97 (85%)
 Frame = +2

Query: 599 TVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITY 778
           T++QQL+ LNKLEYRKLFLVLSYIGR+KLE VVT++ A+EI+ M + PM+ FE+KIW  Y
Sbjct: 63  TITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIWKKY 122

Query: 779 GQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           GQ+F D+SDRSQYL WDSGKTH+Y CHV +DG YYFK
Sbjct: 123 GQRFYDESDRSQYLDWDSGKTHVYYCHVYQDGRYYFK 159


>ref|XP_019239863.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Nicotiana
           attenuata]
 gb|OIT20680.1| putative rna-dependent rna polymerase 5 [Nicotiana attenuata]
          Length = 1063

 Score =  149 bits (376), Expect = 1e-36
 Identities = 91/275 (33%), Positives = 142/275 (51%), Gaps = 6/275 (2%)
 Frame = +2

Query: 83  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMI--LSSKKTITSF 256
           +A++LP S+E+++ +IC+ + Q       R++L  IGE+ S+++L+ I     KKT+   
Sbjct: 16  EAIKLPPSVEQMLNQICKNQRQNSPDETVRRLLLSIGEEGSLDILSKISVYQIKKTL--- 72

Query: 257 SGYVSYLIKRDYKIEAAKVLSAYGSPQVST----QTQRMLSPSSISPYISTQKLNGEXXX 424
           SG++ ++ K+ Y+ E  +      +P  S     Q+ ++   S  SP  S+  +N     
Sbjct: 73  SGFIVFIAKKYYQSETKQFYQQQQTPVSSAESFFQSPQIQRISLSSPNSSSSSVNFSPRN 132

Query: 425 XXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTV 604
                            +D  +   ++     + E+ +F       +  E+R  A    +
Sbjct: 133 GPLFQATVHNNDIVGDGSDSPTSAPQMLSPPTSPERANFQRDSYDPMPSEYRNRAGIQGI 192

Query: 605 SQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQ 784
           S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FES IW  YG 
Sbjct: 193 SEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIWTKYGH 252

Query: 785 KFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
             C+   R QYL WDSG++H Y CHV  DGSY FK
Sbjct: 253 -LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFK 286


>gb|PHT52099.1| hypothetical protein CQW23_06561 [Capsicum baccatum]
          Length = 311

 Score =  139 bits (350), Expect = 2e-35
 Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 1/268 (0%)
 Frame = +2

Query: 89  VRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYV 268
           ++LP S+E+++ ++C+ +NQ P     RK+L  IGE+ S+ +L  I S  +   S SG++
Sbjct: 27  IKLPNSVEQMLNQVCKSQNQNPPDNKVRKLLYGIGEERSLYILKEI-SKCQIRKSLSGFI 85

Query: 269 SYLIKRDYKIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXXXXX 448
            ++ K+ Y     ++     +P  ++       P+ +    S+    G            
Sbjct: 86  LFMAKK-YSHSETQICEKQVAPVTTSAESFYYKPNLLPRNSSSSSSVGLFHRNAALFHKN 144

Query: 449 XXXXXXXXK-TDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQLMVL 625
                     T    I    +    T  +R    +R S      R  A +  +S+QL+ L
Sbjct: 145 DIVGDTSDSPTSAPQIPSRRTTPVTTSFQRDHYARRSSEF--RLRNSASTRGISEQLLAL 202

Query: 626 NKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSD 805
           +KLE+RK FL+L+YIGR+KLE V+ L    +I  M D PM  FES IW  YG   C+ + 
Sbjct: 203 SKLEFRKFFLILNYIGRRKLEDVIMLHDVGDILDMIDQPMSHFESYIWNKYGHP-CENNK 261

Query: 806 RSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           R QYL WDSG+TH+Y CHV  DGSY FK
Sbjct: 262 RVQYLDWDSGRTHLYHCHVHLDGSYTFK 289


>gb|PNT27753.1| hypothetical protein POPTR_007G081300v3 [Populus trichocarpa]
          Length = 1010

 Score =  143 bits (360), Expect = 2e-34
 Identities = 95/277 (34%), Positives = 145/277 (52%), Gaps = 3/277 (1%)
 Frame = +2

Query: 68  DASTHQAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTI 247
           + +  + V LP  +E +I +IC+E+N+ PL+   R  LA +GE+ ++ +L  I S ++  
Sbjct: 3   EINNDKIVPLPCVVEELIAKICREQNRRPLETNTRLTLASLGEEVALNILWRI-SGQEIR 61

Query: 248 TSFSGYVSYLIKRDYKIEAAKVLSAYGSPQV-STQTQRMLSPSSISPYISTQKLNGEXXX 424
            SF G+V +L K+     +  + ++  SP + S+ +     P + SP  +T+ L      
Sbjct: 62  KSFDGFVLHLAKQF----SPNINASSSSPNIHSSLSPSPQQPQNRSPITTTRLLMNSQS- 116

Query: 425 XXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTV 604
                                        D   Q   S  ++  S++  + +   ESTT 
Sbjct: 117 -----------------------------DSGAQSPISLKLEGSSTMDSQRQRGNESTT- 146

Query: 605 SQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYG- 781
           SQ L+ L +LE+RK FL+LSY+G + LE VV++D   +I   KDLPM  FESKIW  +G 
Sbjct: 147 SQHLVALGELEFRKAFLILSYLGGKNLEEVVSVD---QIRGYKDLPMRTFESKIWEAFGC 203

Query: 782 -QKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
            + +  + DR +YL WDSGKTHIY CHV  DGSY FK
Sbjct: 204 RRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFK 240


>ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Nicotiana tomentosiformis]
          Length = 1063

 Score =  142 bits (359), Expect = 2e-34
 Identities = 93/276 (33%), Positives = 140/276 (50%), Gaps = 7/276 (2%)
 Frame = +2

Query: 83  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSS--KKTITSF 256
           +A++LP S+E+++ +IC+ + Q       R++L  IGE+ S+++L+ I  S  KKT+   
Sbjct: 16  EAIKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEISVSQIKKTL--- 72

Query: 257 SGYVSYLIKRDYKIEAAKVLSAYGSPQVSTQTQRMLSP-----SSISPYISTQKLNGEXX 421
           SG++ ++ K+ Y+ E  +      + QVS+      SP     S  SP  S+  +N    
Sbjct: 73  SGFIVFMAKKYYQSETQQFYQQQPT-QVSSAESFFQSPQIQRISLSSPNSSSSSINFSPR 131

Query: 422 XXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTT 601
                             +D  +   ++     + E+  F          E R  A    
Sbjct: 132 IGPLFQATVHNNDIVGDGSDSPTSAPQMLSPPMSPERTIFQRDLYDPTPSEFRNRAGIQG 191

Query: 602 VSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYG 781
           +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    +I  M   PM  FES IW  YG
Sbjct: 192 ISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMAHFESCIWTKYG 251

Query: 782 QKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
              C+   R QYL WDSG++H Y CHV  DGSY FK
Sbjct: 252 H-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFK 286


>ref|XP_022930253.1| probable RNA-dependent RNA polymerase 5 isoform X4 [Cucurbita
           moschata]
          Length = 968

 Score =  142 bits (358), Expect = 3e-34
 Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 4/271 (1%)
 Frame = +2

Query: 89  VRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYV 268
           V LP S+E+ + +IC ++NQPP    AR+ LA +GE+ +++ L  I S   ++ + SG++
Sbjct: 8   VPLPPSVEQFLLQICTQQNQPPPDAKARRALASLGEEMALDALRKISSC--SVRNLSGFI 65

Query: 269 SYLIKRDYKI----EAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXX 436
            ++++ D  I    +   VLS + SP  +    ++ SPS+ S  +  Q L+         
Sbjct: 66  MHMVRNDPCISPQNKTVAVLSPHTSPSSTGCVSQLHSPSTCSASLY-QSLSS-------- 116

Query: 437 XXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQL 616
                               C +S    T EK  F        A     V++   + Q  
Sbjct: 117 --------------------CRVSSPQGTAEKTKFEASTPDKSAIYSSLVSDRVKIPQ-F 155

Query: 617 MVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCD 796
           + L +LE+R+ FL+LSYIG + LE V T D   +I S+  L ME FES++W  +G+K+ +
Sbjct: 156 VALGELEFRRAFLILSYIGGESLERVTTAD---QIQSLSQLAMEKFESEVWKAFGEKYVN 212

Query: 797 KSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           K DR  Y+ WD  KTHIY C+V  DGSY FK
Sbjct: 213 KEDRRMYVDWDRRKTHIYHCYVALDGSYRFK 243


>ref|XP_022930245.1| probable RNA-dependent RNA polymerase 5 isoform X3 [Cucurbita
           moschata]
          Length = 970

 Score =  142 bits (358), Expect = 3e-34
 Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 4/271 (1%)
 Frame = +2

Query: 89  VRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYV 268
           V LP S+E+ + +IC ++NQPP    AR+ LA +GE+ +++ L  I S   ++ + SG++
Sbjct: 8   VPLPPSVEQFLLQICTQQNQPPPDAKARRALASLGEEMALDALRKISSC--SVRNLSGFI 65

Query: 269 SYLIKRDYKI----EAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXX 436
            ++++ D  I    +   VLS + SP  +    ++ SPS+ S  +  Q L+         
Sbjct: 66  MHMVRNDPCISPQNKTVAVLSPHTSPSSTGCVSQLHSPSTCSASLY-QSLSS-------- 116

Query: 437 XXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQL 616
                               C +S    T EK  F        A     V++   + Q  
Sbjct: 117 --------------------CRVSSPQGTAEKTKFEASTPDKSAIYSSLVSDRVKIPQ-F 155

Query: 617 MVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCD 796
           + L +LE+R+ FL+LSYIG + LE V T D   +I S+  L ME FES++W  +G+K+ +
Sbjct: 156 VALGELEFRRAFLILSYIGGESLERVTTAD---QIQSLSQLAMEKFESEVWKAFGEKYVN 212

Query: 797 KSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           K DR  Y+ WD  KTHIY C+V  DGSY FK
Sbjct: 213 KEDRRMYVDWDRRKTHIYHCYVALDGSYRFK 243


>ref|XP_022930237.1| probable RNA-dependent RNA polymerase 5 isoform X2 [Cucurbita
           moschata]
          Length = 1018

 Score =  142 bits (358), Expect = 3e-34
 Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 4/271 (1%)
 Frame = +2

Query: 89  VRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYV 268
           V LP S+E+ + +IC ++NQPP    AR+ LA +GE+ +++ L  I S   ++ + SG++
Sbjct: 8   VPLPPSVEQFLLQICTQQNQPPPDAKARRALASLGEEMALDALRKISSC--SVRNLSGFI 65

Query: 269 SYLIKRDYKI----EAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXX 436
            ++++ D  I    +   VLS + SP  +    ++ SPS+ S  +  Q L+         
Sbjct: 66  MHMVRNDPCISPQNKTVAVLSPHTSPSSTGCVSQLHSPSTCSASLY-QSLSS-------- 116

Query: 437 XXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQL 616
                               C +S    T EK  F        A     V++   + Q  
Sbjct: 117 --------------------CRVSSPQGTAEKTKFEASTPDKSAIYSSLVSDRVKIPQ-F 155

Query: 617 MVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCD 796
           + L +LE+R+ FL+LSYIG + LE V T D   +I S+  L ME FES++W  +G+K+ +
Sbjct: 156 VALGELEFRRAFLILSYIGGESLERVTTAD---QIQSLSQLAMEKFESEVWKAFGEKYVN 212

Query: 797 KSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           K DR  Y+ WD  KTHIY C+V  DGSY FK
Sbjct: 213 KEDRRMYVDWDRRKTHIYHCYVALDGSYRFK 243


>ref|XP_022930229.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Cucurbita
           moschata]
          Length = 1020

 Score =  142 bits (358), Expect = 3e-34
 Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 4/271 (1%)
 Frame = +2

Query: 89  VRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYV 268
           V LP S+E+ + +IC ++NQPP    AR+ LA +GE+ +++ L  I S   ++ + SG++
Sbjct: 8   VPLPPSVEQFLLQICTQQNQPPPDAKARRALASLGEEMALDALRKISSC--SVRNLSGFI 65

Query: 269 SYLIKRDYKI----EAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXX 436
            ++++ D  I    +   VLS + SP  +    ++ SPS+ S  +  Q L+         
Sbjct: 66  MHMVRNDPCISPQNKTVAVLSPHTSPSSTGCVSQLHSPSTCSASLY-QSLSS-------- 116

Query: 437 XXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQL 616
                               C +S    T EK  F        A     V++   + Q  
Sbjct: 117 --------------------CRVSSPQGTAEKTKFEASTPDKSAIYSSLVSDRVKIPQ-F 155

Query: 617 MVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCD 796
           + L +LE+R+ FL+LSYIG + LE V T D   +I S+  L ME FES++W  +G+K+ +
Sbjct: 156 VALGELEFRRAFLILSYIGGESLERVTTAD---QIQSLSQLAMEKFESEVWKAFGEKYVN 212

Query: 797 KSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           K DR  Y+ WD  KTHIY C+V  DGSY FK
Sbjct: 213 KEDRRMYVDWDRRKTHIYHCYVALDGSYRFK 243


>ref|XP_016474249.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
           [Nicotiana tabacum]
          Length = 1058

 Score =  141 bits (355), Expect = 7e-34
 Identities = 93/282 (32%), Positives = 141/282 (50%), Gaps = 13/282 (4%)
 Frame = +2

Query: 83  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMI--LSSKKTITSF 256
           + ++LP S+E+++ +IC+ + Q       R++L  IGE+ S+++L+ I     KKT+   
Sbjct: 16  EVIKLPPSVEQMLNQICKNQRQNLPDEKVRRLLLSIGEEGSLDILSKISVCQIKKTL--- 72

Query: 257 SGYVSYLIKRDYKIEAAKVL-----------SAYGSPQVSTQTQRMLSPSSISPYISTQK 403
           SG++ ++ K+ Y+ E  +             S + SPQ+  Q   + SP+S S  ++   
Sbjct: 73  SGFIVFMAKKYYQSETQQFYQQQPTQVSSAESFFQSPQI--QRISLSSPNSYSSSVNFSP 130

Query: 404 LNGEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHRE 583
            NG                     +D  +   ++     + E+  F          E R 
Sbjct: 131 RNGPLFQATVHNNVGDG-------SDSPTSAPQMLSPPMSPERTIFQRDLYDPTPSEFRN 183

Query: 584 VAESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESK 763
            A    +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FES 
Sbjct: 184 RAGIQGISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESC 243

Query: 764 IWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK 889
           IW  YG   C+   R QYL WDSG++H Y CHV  DGSY FK
Sbjct: 244 IWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFK 284