BLASTX nr result

ID: Rehmannia29_contig00029636 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00029636
         (715 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012066591.2| uncharacterized protein LOC105629587, partia...    44   8e-06

>ref|XP_012066591.2| uncharacterized protein LOC105629587, partial [Jatropha curcas]
          Length = 433

 Score = 43.9 bits (102), Expect(2) = 8e-06
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = +2

Query: 5   DSHCFGLFLYGLRGDVCVRILSKDATDLLDAIHLAREIIRELQST 139
           D    G FL GLR D+ +R+ S+D  DL +A+ ++REI REL+S+
Sbjct: 243 DCQYLGYFLNGLRSDIRLRLRSRDTVDLYNAMKVSREIERELRSS 287



 Score = 34.3 bits (77), Expect(2) = 8e-06
 Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
 Frame = +1

Query: 199 HLECPHGPHRSQAPFT----NGSVQYPGRVQLPPANYCSRILMSSMMSSALTRRARGILQ 366
           H+  P     S +P +    + S+  P  +  PP              +    R+RG  Q
Sbjct: 323 HITSPQPRTTSTSPISPAHPSSSINVPLSLPAPP---------HKPAPTTQNNRSRGTRQ 373

Query: 367 LSHEDYMDPR--GLCFKSRE-LCHLHNCIGNFLRVMI 468
            SH++Y + R  GLCFK +     LH C    LR +I
Sbjct: 374 YSHQEYQELRAKGLCFKCKNPYTPLHECPHKSLRALI 410


Top