BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00029623
         (1216 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021652040.1| uncharacterized protein LOC110643835 [Hevea ...   313   e-140
gb|KOM46937.1| hypothetical protein LR48_Vigan07g064100 [Vigna a...   332   e-137
gb|PNX92076.1| retrovirus-related Pol polyprotein from transposo...   320   e-137
gb|PNX94461.1| retrovirus-related Pol polyprotein from transposo...   317   e-135
gb|PNX77692.1| retrovirus-related Pol polyprotein from transposo...   306   e-134
gb|PNX87108.1| retrovirus-related Pol polyprotein from transposo...   306   e-134
gb|PNX86354.1| retrovirus-related Pol polyprotein from transposo...   306   e-134
gb|PNX92373.1| retrovirus-related Pol polyprotein from transposo...   315   e-134
gb|PNX74277.1| retrovirus-related Pol polyprotein from transposo...   313   e-133
gb|PNX74828.1| retrovirus-related Pol polyprotein from transposo...   311   e-133
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo...   301   e-132
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo...   300   e-132
gb|PNY16682.1| retrovirus-related Pol polyprotein from transposo...   308   e-132
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...   310   e-132
gb|PNY03100.1| retrovirus-related Pol polyprotein from transposo...   304   e-132
gb|PNY16454.1| flavonol sulfotransferase-like protein [Trifolium...   305   e-132
gb|PNY00469.1| retrovirus-related Pol polyprotein from transposo...   312   e-132
gb|PNX93614.1| retrovirus-related Pol polyprotein from transposo...   303   e-131
dbj|GAU46710.1| hypothetical protein TSUD_287990 [Trifolium subt...   301   e-131
dbj|GAU41679.1| hypothetical protein TSUD_272630 [Trifolium subt...   310   e-130

>ref|XP_021652040.1| uncharacterized protein LOC110643835 [Hevea brasiliensis]
          Length = 1095

 Score =  313 bits (802), Expect(2) = e-140
 Identities = 159/260 (61%), Positives = 197/260 (75%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGCKWVYK+K+K +GSIERYKARLVAKGYTQ EG++YFDTFS VA ++ VRL++A+AA  
Sbjct: 610  IGCKWVYKIKHKVDGSIERYKARLVAKGYTQTEGINYFDTFSPVAKMTIVRLLLALAAMH 669

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             WFL QLDVNNAFLHGDL+EEVYM+ P G+ +    +VCKL KSLYGLKQASRQWF KL+
Sbjct: 670  NWFLKQLDVNNAFLHGDLHEEVYMVLPQGFSSSKPNQVCKLLKSLYGLKQASRQWFSKLS 729

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
            + L++ G+ QSKSD+SLF+K  S S   L VYVDD+ILAG++M +I+ VKQ L+D+F IK
Sbjct: 730  TALVSIGYTQSKSDYSLFVKKTSTSFTALLVYVDDVILAGDDMVEIDFVKQFLNDSFHIK 789

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
            DLG LK+ LG+E+AR+SKGI + QRKYAL  L+  GLL  KP+ +PM             
Sbjct: 790  DLGDLKFFLGLEIARSSKGIVVNQRKYALEILSNAGLLASKPAKSPMDASTKLQQHIGES 849

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRLIGR+LYLT T
Sbjct: 850  LSDSAAYRRLIGRLLYLTTT 869



 Score =  215 bits (548), Expect(2) = e-140
 Identities = 100/153 (65%), Positives = 124/153 (81%)
 Frame = +2

Query: 758  Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRS 937
            Q L QF++ PT AH  AAHRVLRYIKN+PG GLF+ + S L LK FSD+DWA C DTRRS
Sbjct: 878  QQLSQFLAHPTSAHQQAAHRVLRYIKNSPGNGLFFPATSSLQLKSFSDSDWAGCVDTRRS 937

Query: 938  ISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPA 1117
            ++G+ +Y G+SL+SWK+KKQ+TVSRSS+EAEYRA+A +TCELQWLT+LL D +V +K+PA
Sbjct: 938  VTGFCIYLGDSLISWKSKKQSTVSRSSSEAEYRALASVTCELQWLTFLLDDFQVAYKKPA 997

Query: 1118 IVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            +VY DN+SA  I  N   HERTKHI+LDCH VR
Sbjct: 998  LVYCDNQSALHIAANPTFHERTKHIELDCHIVR 1030


>gb|KOM46937.1| hypothetical protein LR48_Vigan07g064100 [Vigna angularis]
          Length = 763

 Score =  332 bits (851), Expect(2) = e-137
 Identities = 168/260 (64%), Positives = 196/260 (75%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGC+WVYK KY  +G+IERYKARLVAKGYTQ+EG+DY DTFS VA ++TVRL+I +AA+ 
Sbjct: 295  IGCRWVYKTKYNVDGTIERYKARLVAKGYTQQEGIDYLDTFSPVAKLTTVRLLIVLAASN 354

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             WFLHQLDV NAFL GDLNEEVYM PPPG     + +VC+LTKSLYGLKQASRQWF+KL+
Sbjct: 355  NWFLHQLDVENAFLRGDLNEEVYMEPPPGLNTHKEGQVCRLTKSLYGLKQASRQWFEKLS 414

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
            S L++  + QSKSDHSLFIK  S     L VYVDDIILAGN+M +IN VK  L + F IK
Sbjct: 415  SFLISVNYIQSKSDHSLFIKGTSTDFTALLVYVDDIILAGNSMTEINNVKTLLHNKFQIK 474

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
            +LG LKY LG+EVAR+ KGIHLCQRKYAL  L ETG+LGCKPS+TP              
Sbjct: 475  NLGELKYFLGLEVARSKKGIHLCQRKYALDILKETGMLGCKPSSTPFLSDTSSLYRTDSY 534

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRLIG++LYLT T
Sbjct: 535  LDDLGSYRRLIGKLLYLTNT 554



 Score =  188 bits (478), Expect(2) = e-137
 Identities = 88/157 (56%), Positives = 111/157 (70%)
 Frame = +2

Query: 746  CYI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPD 925
            C+    L QFM  PT  H  A   VLRY K+ P +GLF+  +S +HLK FSD+DWA CP+
Sbjct: 559  CFSINLLSQFMKSPTNHHYRAVQHVLRYTKSKPSEGLFFGDDSPVHLKAFSDSDWATCPN 618

Query: 926  TRRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQH 1105
            TRRS +G+ V+ G SL+SWK+KKQ+TVSRSS +AEYRA+A   CE+QW+ YL QD++VQ 
Sbjct: 619  TRRSTTGFCVFLGSSLISWKSKKQSTVSRSSTKAEYRALAATLCEIQWIHYLQQDLQVQE 678

Query: 1106 KQPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
             +   +Y DNKSA  I  N   HERTKHI+LDCH VR
Sbjct: 679  AETPALYCDNKSARHIAHNQSFHERTKHIELDCHVVR 715


>gb|PNX92076.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 720

 Score =  320 bits (819), Expect(2) = e-137
 Identities = 160/260 (61%), Positives = 194/260 (74%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGC+WVYKVK+ ++GS+ERYKARLVAKG+ Q EGLDYFDTFS VA ++TVR+VIA+A+  
Sbjct: 225  IGCRWVYKVKHHADGSVERYKARLVAKGFNQIEGLDYFDTFSPVAKLTTVRIVIALASVH 284

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             WFLHQLDVNNAFLHGDL E+VYMLPPPG    D  +VCKL KSLYGLKQASRQW+ KLT
Sbjct: 285  NWFLHQLDVNNAFLHGDLQEDVYMLPPPGV-TNDPNKVCKLVKSLYGLKQASRQWYAKLT 343

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
            S LL++G+ Q+ SDHSLF K D+    +L VYVDD+ILAGN+M + + VK  L + F IK
Sbjct: 344  SLLLSHGYKQAHSDHSLFTKHDASHFTLLLVYVDDVILAGNHMAEFSYVKNLLHNAFKIK 403

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTP-----MXXXXXXXX 705
            DLG LKY LG+EVA ++KGI LCQRKY L  L+++GLLG KP +TP              
Sbjct: 404  DLGQLKYFLGLEVAHSAKGISLCQRKYCLDLLSDSGLLGAKPVSTPSDASLKLHADDSAP 463

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRL+GR+LYL  T
Sbjct: 464  FEDISAYRRLVGRLLYLNTT 483



 Score =  198 bits (503), Expect(2) = e-137
 Identities = 95/156 (60%), Positives = 117/156 (75%)
 Frame = +2

Query: 749  YI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDT 928
            +I Q L QF+SKPT  H +AA RVLRY+KN PG+GLF+  NS L + GFSDADWA C D+
Sbjct: 489  FITQQLSQFLSKPTHTHYSAAMRVLRYLKNCPGRGLFFPRNSTLQILGFSDADWAGCKDS 548

Query: 929  RRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHK 1108
            RRSISG   + G+SL+SW+TKKQ TV+RSS+EAEYRA+A  TCELQWL YLLQD+ +   
Sbjct: 549  RRSISGQCFFLGQSLISWRTKKQLTVARSSSEAEYRALAAATCELQWLAYLLQDLHITCP 608

Query: 1109 QPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            +  ++Y DN+SA  I  N   HERTKHI +DCH VR
Sbjct: 609  KLPVLYCDNQSALHIAANPVFHERTKHIDIDCHIVR 644


>gb|PNX94461.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1000

 Score =  317 bits (813), Expect(2) = e-135
 Identities = 159/260 (61%), Positives = 191/260 (73%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGC+WVYKVK+ ++G++ERYKARLVAKG+ Q EGLDYFDTFS VA ++TVR+VIA+A+  
Sbjct: 508  IGCRWVYKVKHHADGTVERYKARLVAKGFNQIEGLDYFDTFSPVAKLTTVRMVIALASVH 567

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             WFLHQLDVNNAFLHGDL E+VYM PPPG    D  +VCKL KSLYGLKQASRQW+ KLT
Sbjct: 568  NWFLHQLDVNNAFLHGDLQEDVYMTPPPGV-TNDPNKVCKLVKSLYGLKQASRQWYAKLT 626

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
            S LL +G+ Q+ SDHSLF K D+    +L VYVDD+I+AGN M +   VK  L + F IK
Sbjct: 627  SLLLAHGYKQAHSDHSLFTKHDASHFTLLLVYVDDVIIAGNYMAEFTYVKTLLHNAFKIK 686

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTP-----MXXXXXXXX 705
            DLGTLKY LG+EVA ++KGI LCQRKY L  LT++GLLG KP +TP              
Sbjct: 687  DLGTLKYFLGLEVAHSAKGISLCQRKYCLDLLTDSGLLGAKPVSTPSDASIKLHADNSAP 746

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRL+GR+LYL  T
Sbjct: 747  FEDISAYRRLVGRLLYLNTT 766



 Score =  196 bits (498), Expect(2) = e-135
 Identities = 94/156 (60%), Positives = 118/156 (75%)
 Frame = +2

Query: 749  YI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDT 928
            +I Q L QF+SKPT  H TAA RVL+Y+KN PG+GLF+  +S L + GFSDADWA C D+
Sbjct: 772  FITQQLSQFLSKPTHTHYTAALRVLKYLKNCPGRGLFFPRSSSLQILGFSDADWAGCKDS 831

Query: 929  RRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHK 1108
            RRSISG+  + G+SL+SW+TKKQ TV+RSS+EAEYRA+A  TCELQWL YLLQD+ V   
Sbjct: 832  RRSISGHCFFLGQSLISWRTKKQITVARSSSEAEYRALASATCELQWLVYLLQDLHVTCS 891

Query: 1109 QPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            +  ++Y DN+SA  I  N   HERTKH+ +DCH VR
Sbjct: 892  KLPVLYCDNQSALHIAANPVFHERTKHLDIDCHVVR 927


>gb|PNX77692.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
 gb|PNX79695.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 589

 Score =  306 bits (784), Expect(2) = e-134
 Identities = 150/260 (57%), Positives = 190/260 (73%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1   IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
           IGC+WVYK+KY ++G++ERYKARLVAKGY Q EGLDYF+T+S VA ++TVRLVIA+A+  
Sbjct: 145 IGCRWVYKIKYHADGTVERYKARLVAKGYNQIEGLDYFETYSPVAKVTTVRLVIALASIH 204

Query: 181 GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
            WFLHQLDVNNAFLHG+L E+VYM+ PPG       +VCKL KSLYGLKQASR+W++KLT
Sbjct: 205 NWFLHQLDVNNAFLHGELQEDVYMVVPPGVTPHKPNQVCKLLKSLYGLKQASRKWYEKLT 264

Query: 361 SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
           S LL + ++Q+ SDHS+FIK    S  +L VYVDD+ILAG ++ +   +K  L D+F IK
Sbjct: 265 STLLQHQYHQASSDHSVFIKKTDASFTILLVYVDDVILAGTSLVEFQHIKSVLHDSFQIK 324

Query: 541 DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTP-----MXXXXXXXX 705
           DLGTLKY LG+EV+ +++GI LCQR Y L  L +TGLLG KP +TP              
Sbjct: 325 DLGTLKYFLGLEVSHSTQGISLCQRNYCLDLLNDTGLLGAKPVSTPSEPSIKLHHDNGTP 384

Query: 706 XXXXXQYRRLIGRMLYLTIT 765
                 YRRLIGR++YL  T
Sbjct: 385 YDDIPAYRRLIGRLIYLNTT 404



 Score =  202 bits (515), Expect(2) = e-134
 Identities = 95/156 (60%), Positives = 121/156 (77%)
 Frame = +2

Query: 749  YI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDT 928
            Y+ Q L QF+SKPT  H  AA RVL+Y+KN+PG+GLF+  +S LH+ GFSDADWA C DT
Sbjct: 410  YVTQQLSQFLSKPTTNHYNAAIRVLKYLKNSPGRGLFFPRDSSLHILGFSDADWAGCVDT 469

Query: 929  RRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHK 1108
            RRSISG   + G+SL+SW+TKKQ TVSRSS+EAEYRA+A  TCELQW+ YLL+DI++Q  
Sbjct: 470  RRSISGQCFFLGKSLISWRTKKQLTVSRSSSEAEYRALAAATCELQWILYLLKDIQIQCS 529

Query: 1109 QPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            +  ++Y DN+SA  I  N   HERTKH+++DCH VR
Sbjct: 530  KLPVIYCDNQSALHIAANPVFHERTKHLEIDCHLVR 565


>gb|PNX87108.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 517

 Score =  306 bits (784), Expect(2) = e-134
 Identities = 150/260 (57%), Positives = 190/260 (73%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1   IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
           IGC+WVYK+KY ++G++ERYKARLVAKGY Q EGLDYF+T+S VA ++TVRLVIA+A+  
Sbjct: 26  IGCRWVYKIKYHADGTVERYKARLVAKGYNQIEGLDYFETYSPVAKVTTVRLVIALASIH 85

Query: 181 GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
            WFLHQLDVNNAFLHG+L E+VYM+ PPG       +VCKL KSLYGLKQASR+W++KLT
Sbjct: 86  NWFLHQLDVNNAFLHGELQEDVYMVVPPGVTPHKPNQVCKLLKSLYGLKQASRKWYEKLT 145

Query: 361 SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
           S LL + ++Q+ SDHS+FIK    S  +L VYVDD+ILAG ++ +   +K  L D+F IK
Sbjct: 146 STLLQHQYHQASSDHSVFIKKTDASFTILLVYVDDVILAGTSLVEFQHIKSVLHDSFQIK 205

Query: 541 DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTP-----MXXXXXXXX 705
           DLGTLKY LG+EV+ +++GI LCQR Y L  L +TGLLG KP +TP              
Sbjct: 206 DLGTLKYFLGLEVSHSTQGISLCQRNYCLDLLNDTGLLGAKPVSTPSEPSIKLHHDNGTP 265

Query: 706 XXXXXQYRRLIGRMLYLTIT 765
                 YRRLIGR++YL  T
Sbjct: 266 YDDIPAYRRLIGRLIYLNTT 285



 Score =  202 bits (515), Expect(2) = e-134
 Identities = 95/156 (60%), Positives = 121/156 (77%)
 Frame = +2

Query: 749  YI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDT 928
            Y+ Q L QF+SKPT  H  AA RVL+Y+KN+PG+GLF+  +S LH+ GFSDADWA C DT
Sbjct: 291  YVTQQLSQFLSKPTTNHYNAAIRVLKYLKNSPGRGLFFPRDSSLHILGFSDADWAGCVDT 350

Query: 929  RRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHK 1108
            RRSISG   + G+SL+SW+TKKQ TVSRSS+EAEYRA+A  TCELQW+ YLL+DI++Q  
Sbjct: 351  RRSISGQCFFLGKSLISWRTKKQLTVSRSSSEAEYRALAAATCELQWILYLLKDIQIQCS 410

Query: 1109 QPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            +  ++Y DN+SA  I  N   HERTKH+++DCH VR
Sbjct: 411  KLPVIYCDNQSALHIAANPVFHERTKHLEIDCHLVR 446


>gb|PNX86354.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 512

 Score =  306 bits (784), Expect(2) = e-134
 Identities = 150/260 (57%), Positives = 190/260 (73%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1   IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
           IGC+WVYK+KY ++G++ERYKARLVAKGY Q EGLDYF+T+S VA ++TVRLVIA+A+  
Sbjct: 26  IGCRWVYKIKYHADGTVERYKARLVAKGYNQIEGLDYFETYSPVAKVTTVRLVIALASIH 85

Query: 181 GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
            WFLHQLDVNNAFLHG+L E+VYM+ PPG       +VCKL KSLYGLKQASR+W++KLT
Sbjct: 86  NWFLHQLDVNNAFLHGELQEDVYMVVPPGVTPHKPNQVCKLLKSLYGLKQASRKWYEKLT 145

Query: 361 SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
           S LL + ++Q+ SDHS+FIK    S  +L VYVDD+ILAG ++ +   +K  L D+F IK
Sbjct: 146 STLLQHQYHQASSDHSVFIKKTDASFTILLVYVDDVILAGTSLVEFQHIKSVLHDSFQIK 205

Query: 541 DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTP-----MXXXXXXXX 705
           DLGTLKY LG+EV+ +++GI LCQR Y L  L +TGLLG KP +TP              
Sbjct: 206 DLGTLKYFLGLEVSHSTQGISLCQRNYCLDLLNDTGLLGAKPVSTPSEPSIKLHHDNGTP 265

Query: 706 XXXXXQYRRLIGRMLYLTIT 765
                 YRRLIGR++YL  T
Sbjct: 266 YDDIPAYRRLIGRLIYLNTT 285



 Score =  202 bits (515), Expect(2) = e-134
 Identities = 95/156 (60%), Positives = 121/156 (77%)
 Frame = +2

Query: 749  YI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDT 928
            Y+ Q L QF+SKPT  H  AA RVL+Y+KN+PG+GLF+  +S LH+ GFSDADWA C DT
Sbjct: 291  YVTQQLSQFLSKPTTNHYNAAIRVLKYLKNSPGRGLFFPRDSSLHILGFSDADWAGCVDT 350

Query: 929  RRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHK 1108
            RRSISG   + G+SL+SW+TKKQ TVSRSS+EAEYRA+A  TCELQW+ YLL+DI++Q  
Sbjct: 351  RRSISGQCFFLGKSLISWRTKKQLTVSRSSSEAEYRALAAATCELQWILYLLKDIQIQCS 410

Query: 1109 QPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            +  ++Y DN+SA  I  N   HERTKH+++DCH VR
Sbjct: 411  KLPVIYCDNQSALHIAANPVFHERTKHLEIDCHLVR 446


>gb|PNX92373.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1125

 Score =  315 bits (807), Expect(2) = e-134
 Identities = 158/260 (60%), Positives = 189/260 (72%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGC+WVYK+K+ ++G++ERYKARLVAKGY Q EGLDYFDTFS VA ++TVR+VIA+A+  
Sbjct: 644  IGCRWVYKIKHHADGTVERYKARLVAKGYNQIEGLDYFDTFSPVAKLTTVRMVIALASIH 703

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             WFLHQLDVNNAFLHGDL E+VYM PPPG    +  +VCKL KSLYGLKQASRQW+ KLT
Sbjct: 704  NWFLHQLDVNNAFLHGDLQEDVYMTPPPGI-TNNPSKVCKLVKSLYGLKQASRQWYAKLT 762

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
            S LL++G+ Q+ SDHSLF K D     +L VYVDD+ILAGN M +   +K  L   F IK
Sbjct: 763  SLLLSHGYKQAHSDHSLFTKHDGTHFTLLLVYVDDVILAGNYMAEFTYIKDILHTAFKIK 822

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTP-----MXXXXXXXX 705
            DLG LKY LG+EVA +SKGI LCQRKY L  L+++G LG KP TTP              
Sbjct: 823  DLGQLKYFLGLEVAHSSKGISLCQRKYCLDLLSDSGFLGAKPITTPSDASLRLHNDIGPI 882

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRL+GR+LYLT T
Sbjct: 883  FEDVSAYRRLVGRLLYLTTT 902



 Score =  192 bits (488), Expect(2) = e-134
 Identities = 93/156 (59%), Positives = 116/156 (74%)
 Frame = +2

Query: 749  YI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDT 928
            Y+ Q L QF+S+PT+ H  AA RVL+Y+K +PG+GLF+   S L L GFSDADWA C D+
Sbjct: 908  YVTQQLSQFLSRPTQMHYNAALRVLKYLKTSPGRGLFFPRASQLQLLGFSDADWAGCKDS 967

Query: 929  RRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHK 1108
            RRSISG   + G+SLVSW+TKKQ TV+RSS+EAEYRA+A  TCELQWL YLLQD+ V   
Sbjct: 968  RRSISGQCFFLGQSLVSWRTKKQFTVARSSSEAEYRALASATCELQWLLYLLQDLGVPCS 1027

Query: 1109 QPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            +  ++Y DN+SA  I  N   HERTKH+ +DCH VR
Sbjct: 1028 KLPVIYCDNQSALHIAANPVFHERTKHLDIDCHIVR 1063


>gb|PNX74277.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 762

 Score =  313 bits (803), Expect(2) = e-133
 Identities = 161/261 (61%), Positives = 188/261 (72%), Gaps = 6/261 (2%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGCKWVYK+KY +NGSIERYKARLVAKGYTQ EG+DYFDTFS VA I+TVR ++A+A+ +
Sbjct: 293  IGCKWVYKIKYHANGSIERYKARLVAKGYTQMEGIDYFDTFSPVAKITTVRFLLALASIK 352

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYC-AKDDKRVCKLTKSLYGLKQASRQWFQKL 357
            GW L QLDVNNAFLHGDLNEEVYM  PPGY  A    +VC+L KSLYGLKQASRQW+ KL
Sbjct: 353  GWDLEQLDVNNAFLHGDLNEEVYMSLPPGYSSAIGSNKVCRLHKSLYGLKQASRQWYSKL 412

Query: 358  TSCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTI 537
            +S L+++G+ QS SDHSL+IKS       L VYVDDI+LAGN+  +I AVK  LD  F I
Sbjct: 413  SSALISFGYKQSVSDHSLYIKSTDSEFTALLVYVDDIVLAGNSSKEIQAVKHFLDQKFKI 472

Query: 538  KDLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXX 702
            KDLG L+Y LG E+AR+ KGI + QRKY L  L +TG L  KPS  P             
Sbjct: 473  KDLGKLRYFLGFEIARSPKGIFVNQRKYTLELLQDTGFLATKPSNIPFNPTTKLSSTDGA 532

Query: 703  XXXXXXQYRRLIGRMLYLTIT 765
                   YRRLIGR+LYLT T
Sbjct: 533  PLKDPSSYRRLIGRLLYLTNT 553



 Score =  192 bits (487), Expect(2) = e-133
 Identities = 87/153 (56%), Positives = 116/153 (75%)
 Frame = +2

Query: 758  Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRS 937
            Q L QF+SKP   H TAA R+L+Y+K+ P  GLF+  +S L L G++D+DWA+CPDTR+S
Sbjct: 562  QHLSQFVSKPLIPHYTAATRILKYLKSAPANGLFFPVSSSLKLTGYADSDWARCPDTRKS 621

Query: 938  ISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPA 1117
            I+GY V+ G SL+SWK+KKQ TVSRSS EAEYRA+A +TCE+QWL YL QD K++   PA
Sbjct: 622  ITGYCVFIGSSLISWKSKKQNTVSRSSTEAEYRALASLTCEIQWLQYLFQDFKMKFSNPA 681

Query: 1118 IVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
             V+ D++SA  +  N   HER+KHI++DCH +R
Sbjct: 682  SVFCDSRSAIYLAHNPAFHERSKHIEIDCHVIR 714


>gb|PNX74828.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 612

 Score =  311 bits (797), Expect(2) = e-133
 Identities = 161/261 (61%), Positives = 188/261 (72%), Gaps = 6/261 (2%)
 Frame = +1

Query: 1   IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
           IGCKWVYK+KY +NGSIERYKARLVAKGYTQ EG+DYFDTFS VA I+TVR ++A+A+ +
Sbjct: 143 IGCKWVYKIKYHANGSIERYKARLVAKGYTQTEGIDYFDTFSPVAKITTVRFLLALASIK 202

Query: 181 GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDD-KRVCKLTKSLYGLKQASRQWFQKL 357
           GW L QLDVNNAFLHGDLNEEVYM  PPGY +     +VCKL KSLYGLKQASRQW+ KL
Sbjct: 203 GWDLEQLDVNNAFLHGDLNEEVYMSLPPGYPSNTGFNKVCKLHKSLYGLKQASRQWYSKL 262

Query: 358 TSCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTI 537
           ++ L++ G+ QS SDHSL+IKS+      L VYVDDIILAGN+  +I  VK  LD  F I
Sbjct: 263 SAALISLGYEQSVSDHSLYIKSNDSEFTALLVYVDDIILAGNSSQEIQDVKHFLDQKFKI 322

Query: 538 KDLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXX 702
           KDLG L+Y LG E+AR+ KGI + QRKYAL  L +TG L  KPS  P             
Sbjct: 323 KDLGKLRYFLGFEIARSPKGIFVNQRKYALELLQDTGFLATKPSKIPFNPTTKLSSTDGA 382

Query: 703 XXXXXXQYRRLIGRMLYLTIT 765
                  YRRLIGR+LYLT T
Sbjct: 383 LLEDPSSYRRLIGRLLYLTNT 403



 Score =  194 bits (492), Expect(2) = e-133
 Identities = 89/153 (58%), Positives = 117/153 (76%)
 Frame = +2

Query: 758  Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRS 937
            Q L QF+SKP   H TAA R+L+Y+K+ P KGLF+  +S L L G++D+DWA+CP+TR+S
Sbjct: 412  QHLSQFVSKPLVPHYTAATRILKYLKSAPAKGLFFPVSSSLKLTGYADSDWARCPETRKS 471

Query: 938  ISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPA 1117
            I+GY V+ G SL+SWK+KKQ TVSRSS EAEYRA+A +TCE+QWL YL QD K++   PA
Sbjct: 472  ITGYCVFLGSSLISWKSKKQNTVSRSSTEAEYRALASLTCEIQWLQYLFQDFKLKFSTPA 531

Query: 1118 IVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
             V+ D+KSA  +  N   HER+KHI+LDCH +R
Sbjct: 532  SVFCDSKSAIYLAHNPIFHERSKHIELDCHVIR 564


>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  301 bits (772), Expect(2) = e-132
 Identities = 152/260 (58%), Positives = 187/260 (71%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            +GC+W+YK+KY ++GSIERYKARLVAKGYTQ EGLDY  TFS VA ++TVRL++A+AA  
Sbjct: 902  VGCRWIYKIKYNADGSIERYKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAVF 961

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             W L QLDVNNAFLHGDLNEEVYM  P G   +   +VCKL KSLYGLKQASRQWF KL+
Sbjct: 962  DWHLKQLDVNNAFLHGDLNEEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQASRQWFAKLS 1021

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
            S L+ +G++QS SDHSLF+K  S S   L +YVDDI+LAGNN+++I  +   LD  F IK
Sbjct: 1022 SFLIHHGYHQSASDHSLFMKFSSSSTTALLIYVDDIVLAGNNLSEIQLITGLLDVAFKIK 1081

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
            DLG LKY LG+EVAR   GIHL QRKY L  L++ G++  +P +TPM             
Sbjct: 1082 DLGNLKYFLGLEVARNKSGIHLSQRKYVLDILSDCGMMASRPVSTPMDYTSRLSASSGTP 1141

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRL+GR++YLT T
Sbjct: 1142 LADPSSYRRLLGRLIYLTTT 1161



 Score =  201 bits (512), Expect(2) = e-132
 Identities = 97/156 (62%), Positives = 118/156 (75%)
 Frame = +2

Query: 749  YI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDT 928
            Y+   L QFMS P+ AH  A  R+LRY+K  PG GLF+ +NS LHLK FSD+DWA C DT
Sbjct: 1167 YVVHHLSQFMSAPSTAHSQAIFRILRYLKQAPGSGLFFPTNSSLHLKAFSDSDWAGCLDT 1226

Query: 929  RRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHK 1108
            RRSI+G++VY G+SL+SW++KKQ TVSRSS+EAEYRA+A  T ELQWLTYLL D+ V   
Sbjct: 1227 RRSITGFSVYLGDSLISWRSKKQPTVSRSSSEAEYRALATTTSELQWLTYLLHDLHVPVH 1286

Query: 1109 QPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            QPA++Y DN+SA  I  N   HERTKHI +DCH VR
Sbjct: 1287 QPALLYCDNQSALHIAANQVFHERTKHIDIDCHLVR 1322


>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1316

 Score =  300 bits (769), Expect(2) = e-132
 Identities = 150/260 (57%), Positives = 189/260 (72%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGC+WVYKVK+K++GSI+RYKARLVAKGYTQ EGLD+FDTFS VA ++TVRL++++AA  
Sbjct: 844  IGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAIN 903

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             W L QLDVNNAFLHGDLNEEVYM  PPG       +VC+L +SLYGLKQASRQW+ +L+
Sbjct: 904  NWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASRQWYARLS 963

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
            S L+ +G+  S SDHSLF+K    +   + +YVDDI+LAGN++ +I+ +   L  TF IK
Sbjct: 964  SFLIQHGYVPSPSDHSLFLKCSPATTTAILIYVDDIVLAGNDLTEIHHLTSLLHTTFQIK 1023

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
            DLG LKY LG+EVAR   GIHLCQRKY L  L++TG+L  KP +TPM             
Sbjct: 1024 DLGNLKYFLGLEVARNHTGIHLCQRKYILDLLSDTGMLASKPVSTPMDYSMHLSASSGTP 1083

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRL+GR++YLT T
Sbjct: 1084 LTDTAAYRRLVGRLIYLTNT 1103



 Score =  202 bits (515), Expect(2) = e-132
 Identities = 96/156 (61%), Positives = 118/156 (75%)
 Frame = +2

Query: 749  YI*Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDT 928
            Y  Q L QF+S PT AH  A  R+LRY+K  PG G+F S NS + L+ FSD+DWA CPDT
Sbjct: 1109 YAVQQLSQFVSNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCPDT 1168

Query: 929  RRSISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHK 1108
            RRSI+G+AVY G+SL+SWK+KKQ TVSRSS+EAEYRA+A  TCELQWL+YLL+D  +   
Sbjct: 1169 RRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDPI 1228

Query: 1109 QPAIVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
             P+I+Y DN+SA  I  N   HERTKHI++DCH VR
Sbjct: 1229 SPSILYCDNQSALQIASNPVFHERTKHIEIDCHIVR 1264


>gb|PNY16682.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1232

 Score =  308 bits (789), Expect(2) = e-132
 Identities = 156/258 (60%), Positives = 184/258 (71%), Gaps = 5/258 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGCKWV+K+K  +NG+IERYKARLVAKGYTQ EG+DY DTFS V  ++T+R+ +A+AA Q
Sbjct: 753  IGCKWVFKLKLHANGTIERYKARLVAKGYTQTEGIDYMDTFSPVVKMTTIRMFLAIAAIQ 812

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             W L+QLDVN AFLHGDLNEEVYM PPPG     +  VCKL +SLYGLKQASRQW  KLT
Sbjct: 813  NWPLYQLDVNTAFLHGDLNEEVYMKPPPGLALPSNNLVCKLQRSLYGLKQASRQWNTKLT 872

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
              LL+ G+ QSKSD+SLF K  S    V+ VYVDD++L G +  +I  +K  LD+ F+IK
Sbjct: 873  ETLLSSGYIQSKSDYSLFTKQASSGFTVILVYVDDLVLGGTDSEEIQKIKTLLDEKFSIK 932

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
            DLG LKY LG EVART  GI LCQRKYAL  + +TGLLG KP TTPM             
Sbjct: 933  DLGILKYFLGFEVARTQAGISLCQRKYALDLIQDTGLLGAKPCTTPMQPQLQLHSASGEA 992

Query: 706  XXXXXQYRRLIGRMLYLT 759
                  YRRLIGR+LYLT
Sbjct: 993  ISDLTAYRRLIGRLLYLT 1010



 Score =  194 bits (493), Expect(2) = e-132
 Identities = 91/151 (60%), Positives = 110/151 (72%)
 Frame = +2

Query: 764  LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRSIS 943
            L QF++ PT  H+ A   VL+YIKN PG+GLF+++NS L LKGFSD+DW  CPDTRRS +
Sbjct: 1023 LSQFLAAPTNEHMLAGLHVLKYIKNCPGQGLFFAANSSLILKGFSDSDWGACPDTRRSTT 1082

Query: 944  GYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPAIV 1123
            G   + G SL+SWK+KKQ  VSRSS+EAEYRA+A  TCE QWL YLL D  + H  P ++
Sbjct: 1083 GLCFFLGNSLISWKSKKQNVVSRSSSEAEYRALAQATCEAQWLKYLLHDFNIPHSTPIVL 1142

Query: 1124 YTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            Y DNKSA  I  N   HERTKHI+LDCH VR
Sbjct: 1143 YCDNKSALHIAANPVFHERTKHIELDCHVVR 1173


>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
           from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score =  310 bits (794), Expect(2) = e-132
 Identities = 156/261 (59%), Positives = 196/261 (75%), Gaps = 7/261 (2%)
 Frame = +1

Query: 4   GCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQG 183
           GCKWV++VK++++GS ERYKARLVAKGYTQ  G+DYFDTFS VA I+TVRL++A+A ++ 
Sbjct: 216 GCKWVFRVKHRADGSTERYKARLVAKGYTQI-GVDYFDTFSPVAKITTVRLLLALATSRH 274

Query: 184 WFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLTS 363
           W + QLDVNNAFLHGDLNE+VYMLPPPG+ + D  +VCKL KS+YGLKQASRQWF KLT+
Sbjct: 275 WHIQQLDVNNAFLHGDLNEDVYMLPPPGF-SHDSTKVCKLHKSIYGLKQASRQWFSKLTT 333

Query: 364 CLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIKD 543
            L++ G+ QS +DHS+F K  S+   VL +YVDDIIL G +  +I  VKQ LD TF IKD
Sbjct: 334 ALISLGYIQSTADHSMFTKKHSEDFTVLLIYVDDIILTGTSSPEIMKVKQFLDTTFRIKD 393

Query: 544 LGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPMXXXXXXXXXXXXXQ 723
           LG LKY LG+EVARTS+GIH+ QRKYAL  L E+G + CKP+ TPM             +
Sbjct: 394 LGDLKYFLGLEVARTSQGIHISQRKYALEILQESGFIECKPAKTPMATKSVYKLTSTDGE 453

Query: 724 -------YRRLIGRMLYLTIT 765
                  YR+L+G++LYLT T
Sbjct: 454 LLSDITSYRQLVGKLLYLTST 474



 Score =  192 bits (488), Expect(2) = e-132
 Identities = 92/153 (60%), Positives = 110/153 (71%)
 Frame = +2

Query: 758  Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRS 937
            Q L QFM KPT  HL AAHRVLRY+K  P  GLFY ++S   LK FSD+DWA CP+TRRS
Sbjct: 483  QQLSQFMDKPTTNHLQAAHRVLRYLKGCPSTGLFYPASSSFELKAFSDSDWAGCPETRRS 542

Query: 938  ISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPA 1117
            I+GY ++ GE+L+SW+ KKQ TVSRSS+EAEYRA+A   CE+QWL YLL D+ V      
Sbjct: 543  ITGYCIFFGEALISWRAKKQPTVSRSSSEAEYRALASTVCEVQWLHYLLCDLHVPISHAT 602

Query: 1118 IVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
             V+ DNKS   I  N   HERTKHI++DCH VR
Sbjct: 603  PVFCDNKSTIQIASNPTFHERTKHIEIDCHIVR 635


>gb|PNY03100.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 629

 Score =  304 bits (779), Expect(2) = e-132
 Identities = 154/258 (59%), Positives = 184/258 (71%), Gaps = 5/258 (1%)
 Frame = +1

Query: 1   IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
           IGCKWV+K+K  ++G+IERYKARLVAKGYTQ EG+DY DTFS V  ++T+R+++AVAAAQ
Sbjct: 150 IGCKWVFKLKLHADGTIERYKARLVAKGYTQTEGIDYMDTFSPVVKMTTIRVLLAVAAAQ 209

Query: 181 GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
            W L+QLDVN AFLHGDLNEEVYM PPPG        VCKL +SLYGLKQASRQW  KLT
Sbjct: 210 NWPLYQLDVNTAFLHGDLNEEVYMQPPPGLSLPHSNLVCKLQRSLYGLKQASRQWNTKLT 269

Query: 361 SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
             L   G+ QSKSD+SLF K  S  + ++ VYVDD++L G + N+I  +K  LD+ F+IK
Sbjct: 270 ETLTASGYVQSKSDYSLFTKQASSGLTIILVYVDDLVLGGTDSNEIQNIKALLDEKFSIK 329

Query: 541 DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
           DLG LKY LG EVART  GI LCQRKYAL  + + GLLG KP +TPM             
Sbjct: 330 DLGYLKYFLGFEVARTQAGISLCQRKYALDLIQDAGLLGAKPCSTPMQPQLQLHKSSGQA 389

Query: 706 XXXXXQYRRLIGRMLYLT 759
                 YRRLIGR+LYLT
Sbjct: 390 ISEPTSYRRLIGRLLYLT 407



 Score =  198 bits (503), Expect(2) = e-132
 Identities = 91/151 (60%), Positives = 112/151 (74%)
 Frame = +2

Query: 764  LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRSIS 943
            L QF+ KPT  H+ A   VLRY+KN+PG+GLF+ S S L LKGFSD+DW  CPDTRRS +
Sbjct: 420  LSQFLDKPTNEHMLAGLHVLRYVKNSPGQGLFFDSKSPLTLKGFSDSDWGACPDTRRSTT 479

Query: 944  GYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPAIV 1123
            G+  + G SL+SWK+KKQ  VSRSS+EAEYRA+A  TCE QWL +LLQD+ + H  P ++
Sbjct: 480  GFCFFLGNSLISWKSKKQNVVSRSSSEAEYRALAQTTCEGQWLKFLLQDLHISHPTPIVI 539

Query: 1124 YTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            Y DNKSA  I  N   HERTKHI++DCH VR
Sbjct: 540  YCDNKSALHIAANPVFHERTKHIEMDCHVVR 570


>gb|PNY16454.1| flavonol sulfotransferase-like protein [Trifolium pratense]
          Length = 1475

 Score =  305 bits (781), Expect(2) = e-132
 Identities = 155/258 (60%), Positives = 183/258 (70%), Gaps = 5/258 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGCKWV+K+K  +NG+IERYKARLVAKGYTQ EG+DY DTFS V  ++T+R+ +A+AA Q
Sbjct: 982  IGCKWVFKLKLHANGTIERYKARLVAKGYTQTEGIDYMDTFSPVVKMTTIRMFLAIAAIQ 1041

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             W L+QLDVN AFLHGDL+EEVYM PPPG        VCKL +SLYGLKQASRQW  KLT
Sbjct: 1042 NWPLYQLDVNTAFLHGDLDEEVYMKPPPGLDLPSPNLVCKLQRSLYGLKQASRQWNTKLT 1101

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
              LL+ G+ QSKSD+SLF K  S    V+ VYVDD++L G +  +I  +K  LD  F+IK
Sbjct: 1102 QTLLSSGYTQSKSDYSLFTKQASSGFTVILVYVDDLVLGGTDDKEIQKIKALLDRKFSIK 1161

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
            DLGTLKY LG EVART  GI LCQRKYAL  + +TGLLG KP TTPM             
Sbjct: 1162 DLGTLKYFLGFEVARTQAGISLCQRKYALDLIQDTGLLGAKPCTTPMQPQLQLHSESGTI 1221

Query: 706  XXXXXQYRRLIGRMLYLT 759
                  YRRL+GR+LYLT
Sbjct: 1222 LSDPSTYRRLVGRLLYLT 1239



 Score =  197 bits (500), Expect(2) = e-132
 Identities = 92/151 (60%), Positives = 111/151 (73%)
 Frame = +2

Query: 764  LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRSIS 943
            L QF+S PT  H+ A   VL+YIKN PG+GLF+++NS L LKGFSD+DWA CPDTRRS +
Sbjct: 1252 LSQFLSAPTNEHMLAGLHVLKYIKNCPGQGLFFAANSSLKLKGFSDSDWAACPDTRRSTT 1311

Query: 944  GYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPAIV 1123
            G   + G SL+SWK+KKQ  VSRSS+EAEYRA+A  TCE QWL YLL D  + H  P ++
Sbjct: 1312 GLCFFLGNSLISWKSKKQNVVSRSSSEAEYRALAQATCEAQWLKYLLNDFHISHSSPIVL 1371

Query: 1124 YTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            Y DN+SA  I  N   HERTKHI+LDCH VR
Sbjct: 1372 YCDNRSALHIAANPVFHERTKHIELDCHVVR 1402


>gb|PNY00469.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 778

 Score =  312 bits (799), Expect(2) = e-132
 Identities = 158/260 (60%), Positives = 193/260 (74%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGCKWVYK+KY +NG+IERYKARLVAKGYTQ EG+DYFDTFS VA ++TVR+++AVAA +
Sbjct: 311  IGCKWVYKIKYHANGTIERYKARLVAKGYTQMEGVDYFDTFSPVAKMTTVRVLLAVAAVR 370

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
            GW L QLDVNNAFLHGDL+EEVYM  PPGY A   K VCKL KSLYGLKQASRQW+ KL+
Sbjct: 371  GWHLEQLDVNNAFLHGDLHEEVYMSLPPGYDATPSK-VCKLNKSLYGLKQASRQWYSKLS 429

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
            + L++ G+  S++DHSL++KS   S   L VYVDDI+LAG ++ +I +VK  LD  F IK
Sbjct: 430  AALISLGYQASQADHSLYVKSHGTSFTALLVYVDDIVLAGTSIEEIKSVKLFLDQQFKIK 489

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
            DLG L++ LG+E+AR+S GI L QRKY L  L +TG LG KP+T P+             
Sbjct: 490  DLGPLRFFLGLEIARSSSGIFLNQRKYTLELLEDTGFLGSKPATVPLDPHTKLSATDGVP 549

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRLIGR+LYLT T
Sbjct: 550  FDDPSGYRRLIGRLLYLTHT 569



 Score =  189 bits (481), Expect(2) = e-132
 Identities = 90/153 (58%), Positives = 113/153 (73%)
 Frame = +2

Query: 758  Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRS 937
            Q L Q++S P   H  AA R+LRY+K+ P KG+ +SS+S L L GF+D+DWA CP+TRRS
Sbjct: 578  QHLSQYVSTPLVPHYQAATRILRYLKSCPAKGVLFSSHSPLQLHGFADSDWACCPNTRRS 637

Query: 938  ISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPA 1117
            ++GY V  G SL+SWK+KKQ TVSRSS EAEYRA+A +TCELQWL YL QD+ +   Q A
Sbjct: 638  VTGYCVLLGSSLISWKSKKQNTVSRSSTEAEYRALASLTCELQWLQYLFQDLHITFPQSA 697

Query: 1118 IVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
             VY DNKSA  +  N   HER+KHI+LDCH +R
Sbjct: 698  SVYCDNKSAIYLAHNPTFHERSKHIELDCHIIR 730


>gb|PNX93614.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1430

 Score =  303 bits (777), Expect(2) = e-131
 Identities = 155/264 (58%), Positives = 191/264 (72%), Gaps = 9/264 (3%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGCKWVYK+K+ ++GSIERYKARLVAKGYTQ EG+DYFDTFS VA ++TV+ ++A+A+ +
Sbjct: 951  IGCKWVYKIKHNADGSIERYKARLVAKGYTQMEGVDYFDTFSPVAKLTTVKTLLALASIK 1010

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYC----AKDDKRVCKLTKSLYGLKQASRQWF 348
            GWFL QLDVNNAFLHGDLNEEVYM  PPG        +  +VC+L KSLYGLKQASRQW+
Sbjct: 1011 GWFLEQLDVNNAFLHGDLNEEVYMSLPPGVIIPNSCSNTPKVCRLHKSLYGLKQASRQWY 1070

Query: 349  QKLTSCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDT 528
             KL+S LL+ G++QS +DHSLF+K    S   L VYVDDI+LAGNN  +I +VK  LD  
Sbjct: 1071 SKLSSALLSLGYSQSAADHSLFLKKVGSSFTALLVYVDDIVLAGNNSLEITSVKSFLDKR 1130

Query: 529  FTIKDLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPMXXXXXXXXX 708
            F IKDLG L++ +G+E+AR+ KGI L QRKY L  L ++G L  KPS+TP          
Sbjct: 1131 FQIKDLGNLRFFVGLEIARSKKGILLNQRKYTLELLQDSGNLAAKPSSTPYDPSLKLHDS 1190

Query: 709  XXXXQ-----YRRLIGRMLYLTIT 765
                      YRRLIGR+LYLT T
Sbjct: 1191 ESPPYNDPSGYRRLIGRLLYLTTT 1214



 Score =  197 bits (500), Expect(2) = e-131
 Identities = 93/153 (60%), Positives = 118/153 (77%)
 Frame = +2

Query: 758  Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRS 937
            Q L QF+S P E H  AA +VLRY+K +P KGLF+SS+S L L GFSD+DWA C  TR+S
Sbjct: 1223 QQLSQFVSSPREVHFQAATKVLRYLKASPAKGLFFSSSSSLKLSGFSDSDWATCAITRKS 1282

Query: 938  ISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPA 1117
            I+GY V+ G SL+SWK+KKQ+TVSRSS+EAEYRA+A ++CELQWL YL +D+ ++   PA
Sbjct: 1283 ITGYCVFLGTSLISWKSKKQSTVSRSSSEAEYRALASLSCELQWLHYLFKDLGIKFDAPA 1342

Query: 1118 IVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            +VY DNKSA  +  N   HERTKHI++DCH VR
Sbjct: 1343 MVYCDNKSAIYLAHNPSFHERTKHIEIDCHVVR 1375


>dbj|GAU46710.1| hypothetical protein TSUD_287990 [Trifolium subterraneum]
          Length = 1016

 Score =  301 bits (771), Expect(2) = e-131
 Identities = 152/260 (58%), Positives = 186/260 (71%), Gaps = 5/260 (1%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            IGCKWV+K+K  ++GSIER+KARLVAKGYTQ EGLDY DTFS V  ++T+R+++A+AA+Q
Sbjct: 533  IGCKWVFKLKLHADGSIERHKARLVAKGYTQTEGLDYMDTFSPVVKMTTIRVLLAIAASQ 592

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDKRVCKLTKSLYGLKQASRQWFQKLT 360
             W L+QLDVN  FLHGDLNEEVYM PPPG        VCKL +SLYGLKQASRQW  +LT
Sbjct: 593  NWPLYQLDVNTTFLHGDLNEEVYMSPPPGLSLPTHNLVCKLQRSLYGLKQASRQWNTELT 652

Query: 361  SCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTIK 540
              L ++G+ QSKSD+S F K  S    V+ VYVDD++L G ++ +IN++K+ LD  F+IK
Sbjct: 653  DTLTSHGYIQSKSDYSHFTKQSSSGFTVILVYVDDLVLGGTDVEEINSIKRLLDKKFSIK 712

Query: 541  DLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXXX 705
            DLG LKY LG EVAR+ KGI LCQRKY L  + +TGLLG KP  TPM             
Sbjct: 713  DLGLLKYFLGFEVARSQKGISLCQRKYTLDLIKDTGLLGSKPCNTPMQPQLQLHTASGDP 772

Query: 706  XXXXXQYRRLIGRMLYLTIT 765
                  YRRLIGR+LYLT T
Sbjct: 773  ISDPIVYRRLIGRLLYLTHT 792



 Score =  196 bits (498), Expect(2) = e-131
 Identities = 92/151 (60%), Positives = 114/151 (75%)
 Frame = +2

Query: 764  LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRSIS 943
            L QF++KP+  H+ AA  VL+YIK +P +GLFY SNS L LKGFSD+DW  CPDTRRS +
Sbjct: 803  LSQFLAKPSTEHMLAAIHVLKYIKQSPDQGLFYKSNSSLKLKGFSDSDWGACPDTRRSTT 862

Query: 944  GYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPAIV 1123
            G+  Y G SL+SWK+KK+  VSRSS++AEYRA+A  TCE QWL YLLQD K+ H +P I+
Sbjct: 863  GFCFYLGNSLISWKSKKKNIVSRSSSDAEYRALAQATCEGQWLMYLLQDFKIAHTEPIIL 922

Query: 1124 YTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
            Y DNKSA  I  N   HERTK+I++DCH VR
Sbjct: 923  YCDNKSALHIAVNPVFHERTKYIEIDCHVVR 953


>dbj|GAU41679.1| hypothetical protein TSUD_272630 [Trifolium subterraneum]
          Length = 1178

 Score =  310 bits (793), Expect(2) = e-130
 Identities = 157/261 (60%), Positives = 195/261 (74%), Gaps = 6/261 (2%)
 Frame = +1

Query: 1    IGCKWVYKVKYKSNGSIERYKARLVAKGYTQEEGLDYFDTFSLVANISTVRLVIAVAAAQ 180
            +GCKWVYKVKY +NGSIERYKARLVAKGYTQ EG+DYFDTFS VA I+TVR+++A+A+ +
Sbjct: 709  VGCKWVYKVKYHANGSIERYKARLVAKGYTQLEGVDYFDTFSPVAKITTVRVLLALASIK 768

Query: 181  GWFLHQLDVNNAFLHGDLNEEVYMLPPPGYCAKDDK-RVCKLTKSLYGLKQASRQWFQKL 357
            GW L QLDVNNAFLHGDLNE+VYM  PPG+ A ++  +VCKL KS+YGLKQASRQW+ KL
Sbjct: 769  GWHLEQLDVNNAFLHGDLNEDVYMSLPPGFAATNESNKVCKLHKSIYGLKQASRQWYSKL 828

Query: 358  TSCLLTYGFNQSKSDHSLFIKSDSDSILVLCVYVDDIILAGNNMNQINAVKQHLDDTFTI 537
            +S L++ G+  S+SDHSL+IKS ++S   L VYVDDI+LAGN++++I  VK  LD  F I
Sbjct: 829  SSSLVSLGYTPSQSDHSLYIKSTTNSFTALLVYVDDIVLAGNSIHEIQTVKLFLDQKFKI 888

Query: 538  KDLGTLKYILGIEVARTSKGIHLCQRKYALYRLTETGLLGCKPSTTPM-----XXXXXXX 702
            KDLG L+Y L +E+AR+  GI + QRKY L  L + GLLG KPS+ P             
Sbjct: 889  KDLGKLRYFLVLEIARSDTGIFVNQRKYTLELLEDVGLLGTKPSSIPFHPTTKLSSTDGA 948

Query: 703  XXXXXXQYRRLIGRMLYLTIT 765
                   YRRLIGR+LYLT T
Sbjct: 949  PLDDPSSYRRLIGRLLYLTHT 969



 Score =  187 bits (475), Expect(2) = e-130
 Identities = 85/153 (55%), Positives = 113/153 (73%)
 Frame = +2

Query: 758  Q*LYQFMSKPTEAHLTAAHRVLRYIKNNPGKGLFYSSNSILHLKGFSDADWAKCPDTRRS 937
            Q L QF+SKP   H  AA  +L+Y+K++P KG+F S++S L +  F+D+DWA+CP+TR+S
Sbjct: 978  QHLSQFVSKPLVPHYNAAMHILKYLKSDPAKGIFLSASSSLKISAFADSDWARCPETRKS 1037

Query: 938  ISGYAVYHGESLVSWKTKKQATVSRSSAEAEYRAIALITCELQWLTYLLQDIKVQHKQPA 1117
            I G+ V  G SL+SWK+KKQ TVSRSS EAEYRA+A +TCE+QWL Y+ QD K+    PA
Sbjct: 1038 IIGFCVLLGSSLISWKSKKQNTVSRSSTEAEYRALASLTCEIQWLQYIFQDFKIIFSNPA 1097

Query: 1118 IVYTDNKSAYCITQNACNHERTKHIQLDCHFVR 1216
             V+ DNKSA  +  N   HER+KHI+LDCH +R
Sbjct: 1098 YVFCDNKSAIYLAHNPTFHERSKHIELDCHVIR 1130