BLASTX nr result
ID: Rehmannia29_contig00029617
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00029617
(994 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo... 296 e-124
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo... 296 e-124
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo... 296 e-124
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo... 296 e-124
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 298 e-124
emb|CAA69272.1| lectin receptor kinase, partial [Arabidopsis tha... 298 e-124
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 295 e-123
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 295 e-123
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 294 e-122
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 288 e-121
ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabid... 292 e-121
ref|XP_013583262.1| PREDICTED: LOW QUALITY PROTEIN: copia protei... 283 e-118
gb|ACN78973.1| copia-type polyprotein [Glycine max] >gi|22501615... 248 e-104
gb|AIC77183.1| polyprotein [Gossypium barbadense] 264 e-103
gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposo... 234 1e-97
gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposo... 234 1e-97
gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposo... 234 4e-97
gb|KYP58997.1| Retrovirus-related Pol polyprotein from transposo... 231 1e-96
gb|KYP49211.1| Retrovirus-related Pol polyprotein from transposo... 227 2e-93
gb|PNX73691.1| copia-type reverse transcriptase-like protein, pa... 230 3e-93
>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1342
Score = 296 bits (757), Expect(2) = e-124
Identities = 150/233 (64%), Positives = 182/233 (78%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQSI 522
+++K +ISR+V FDEE +WD+ + + +E + Q+ PTTP TS +
Sbjct: 736 DSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDD--VEQQQQPQETPTTPPTSPNT 793
Query: 521 AGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRDA 342
D S +ER + R RSL+++YE TE +D++TLFCL ADCEP+ F+EA+ K WR+A
Sbjct: 794 TLQDYESS--SER-MPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAIGKKSWRNA 850
Query: 341 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 162
MDEEI+AI KNDTWEL SLPK H AIGVKWVYKAKK++KGE++RYKARLVAKGYSQRAGI
Sbjct: 851 MDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGI 910
Query: 161 DYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
DYDEVFAPVARLET+RLIISLAAQN WKIHQMDVKSAFLNGVLEEEVYIEQP+
Sbjct: 911 DYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQ 963
Score = 181 bits (458), Expect(2) = e-124
Identities = 85/97 (87%), Positives = 92/97 (94%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSK+LPKEFWAEAVACAVYL+NRSPTRSV GKTPQEAWSGRKPGISHL+VFGS
Sbjct: 639 MARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSI 698
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+ HVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 699 AHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNP 735
>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1342
Score = 296 bits (757), Expect(2) = e-124
Identities = 150/233 (64%), Positives = 182/233 (78%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQSI 522
+++K +ISR+V FDEE +WD+ + + +E + Q+ PTTP TS +
Sbjct: 736 DSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDD--VEQQQQPQETPTTPPTSPNT 793
Query: 521 AGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRDA 342
D S +ER + R RSL+++YE TE +D++TLFCL ADCEP+ F+EA+ K WR+A
Sbjct: 794 TLQDYESS--SER-MPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAIGKKSWRNA 850
Query: 341 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 162
MDEEI+AI KNDTWEL SLPK H AIGVKWVYKAKK++KGE++RYKARLVAKGYSQRAGI
Sbjct: 851 MDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGI 910
Query: 161 DYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
DYDEVFAPVARLET+RLIISLAAQN WKIHQMDVKSAFLNGVLEEEVYIEQP+
Sbjct: 911 DYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQ 963
Score = 181 bits (458), Expect(2) = e-124
Identities = 85/97 (87%), Positives = 92/97 (94%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSK+LPKEFWAEAVACAVYL+NRSPTRSV GKTPQEAWSGRKPGISHL+VFGS
Sbjct: 639 MARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSI 698
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+ HVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 699 AHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNP 735
>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1331
Score = 296 bits (757), Expect(2) = e-124
Identities = 150/233 (64%), Positives = 182/233 (78%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQSI 522
+++K +ISR+V FDEE +WD+ + + +E + Q+ PTTP TS +
Sbjct: 725 DSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDD--VEQQQQPQETPTTPPTSPNT 782
Query: 521 AGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRDA 342
D S +ER + R RSL+++YE TE +D++TLFCL ADCEP+ F+EA+ K WR+A
Sbjct: 783 TLQDYESS--SER-MPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAIGKKSWRNA 839
Query: 341 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 162
MDEEI+AI KNDTWEL SLPK H AIGVKWVYKAKK++KGE++RYKARLVAKGYSQRAGI
Sbjct: 840 MDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGI 899
Query: 161 DYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
DYDEVFAPVARLET+RLIISLAAQN WKIHQMDVKSAFLNGVLEEEVYIEQP+
Sbjct: 900 DYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQ 952
Score = 181 bits (458), Expect(2) = e-124
Identities = 85/97 (87%), Positives = 92/97 (94%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSK+LPKEFWAEAVACAVYL+NRSPTRSV GKTPQEAWSGRKPGISHL+VFGS
Sbjct: 628 MARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSI 687
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+ HVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 688 AHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNP 724
>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1033
Score = 296 bits (757), Expect(2) = e-124
Identities = 150/233 (64%), Positives = 182/233 (78%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQSI 522
+++K +ISR+V FDEE +WD+ + + +E + Q+ PTTP TS +
Sbjct: 670 DSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDD--VEQQQQPQETPTTPPTSPNT 727
Query: 521 AGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRDA 342
D S +ER + R RSL+++YE TE +D++TLFCL ADCEP+ F+EA+ K WR+A
Sbjct: 728 TLQDYESS--SER-MPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAIGKKSWRNA 784
Query: 341 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 162
MDEEI+AI KNDTWEL SLPK H AIGVKWVYKAKK++KGE++RYKARLVAKGYSQRAGI
Sbjct: 785 MDEEIEAIKKNDTWELVSLPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGI 844
Query: 161 DYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
DYDEVFAPVARLET+RLIISLAAQN WKIHQMDVKSAFLNGVLEEEVYIEQP+
Sbjct: 845 DYDEVFAPVARLETVRLIISLAAQNNWKIHQMDVKSAFLNGVLEEEVYIEQPQ 897
Score = 181 bits (458), Expect(2) = e-124
Identities = 85/97 (87%), Positives = 92/97 (94%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSK+LPKEFWAEAVACAVYL+NRSPTRSV GKTPQEAWSGRKPGISHL+VFGS
Sbjct: 573 MARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSI 632
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+ HVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 633 AHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNP 669
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 298 bits (762), Expect(2) = e-124
Identities = 154/235 (65%), Positives = 185/235 (78%), Gaps = 2/235 (0%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEV--QQEPTTPSTSQ 528
+TKK +ISR++ FDEE +WD+ S +P EPT E +EPTTP TS
Sbjct: 738 DTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEE-DKP-EPTREEPPSEEPTTPPTSP 795
Query: 527 SIAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWR 348
+ + + S ER R RS+++LYE TE +++TLFCL A+CEP+ F+EA++ K WR
Sbjct: 796 TSSQIEESSS---ER-TPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWR 851
Query: 347 DAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRA 168
+AMDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQRA
Sbjct: 852 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRA 911
Query: 167 GIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
GIDYDE+FAPVARLET+RLIISLAAQN+WKIHQMDVKSAFLNG LEEEVYIEQP+
Sbjct: 912 GIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 966
Score = 177 bits (449), Expect(2) = e-124
Identities = 83/97 (85%), Positives = 91/97 (93%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSKRLPKE WAEAVACAVYL NRSPT+SV GKTPQEAWSGRKPG+SHL+VFGS
Sbjct: 641 MARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSI 700
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+AHVPDE+R+KLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 701 AHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNP 737
>emb|CAA69272.1| lectin receptor kinase, partial [Arabidopsis thaliana]
Length = 623
Score = 298 bits (762), Expect(2) = e-124
Identities = 154/235 (65%), Positives = 185/235 (78%), Gaps = 2/235 (0%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEV--QQEPTTPSTSQ 528
+TKK +ISR++ FDEE +WD+ S +P EPT E +EPTTP TS
Sbjct: 235 DTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEE-DKP-EPTREEPPSEEPTTPPTSP 292
Query: 527 SIAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWR 348
+ + + S ER R RS+++LYE TE +++TLFCL A+CEP+ F+EA++ K WR
Sbjct: 293 TSSQIEESSS---ER-TPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWR 348
Query: 347 DAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRA 168
+AMDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQRA
Sbjct: 349 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRA 408
Query: 167 GIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
GIDYDE+FAPVARLET+RLIISLAAQN+WKIHQMDVKSAFLNG LEEEVYIEQP+
Sbjct: 409 GIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 463
Score = 177 bits (449), Expect(2) = e-124
Identities = 83/97 (85%), Positives = 91/97 (93%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSKRLPKE WAEAVACAVYL NRSPT+SV GKTPQEAWSGRKPG+SHL+VFGS
Sbjct: 138 MARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSI 197
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+AHVPDE+R+KLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 198 AHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNP 234
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 295 bits (754), Expect(2) = e-123
Identities = 152/235 (64%), Positives = 183/235 (77%), Gaps = 2/235 (0%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEV--QQEPTTPSTSQ 528
+TKK +ISR++ FDEE +WD+ S + EPT E +EPTTP TS
Sbjct: 738 DTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEP--EPTREEPPSEEPTTPPTSP 795
Query: 527 SIAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWR 348
+ + + S ER R RS+++LYE TE +++TLFCL A+CEP+ F++A++ K WR
Sbjct: 796 TSSQIEESSS---ER-TPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWR 851
Query: 347 DAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRA 168
+AMDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQR
Sbjct: 852 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRV 911
Query: 167 GIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
GIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMDVKSAFLNG LEEEVYIEQP+
Sbjct: 912 GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 966
Score = 178 bits (452), Expect(2) = e-123
Identities = 84/97 (86%), Positives = 91/97 (93%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSKRLPKE WAEAVACAVYL NRSPT+SV GKTPQEAWSGRKPG+SHL+VFGS
Sbjct: 641 MARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSI 700
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+AHVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 701 AHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNP 737
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 295 bits (754), Expect(2) = e-123
Identities = 152/235 (64%), Positives = 183/235 (77%), Gaps = 2/235 (0%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEV--QQEPTTPSTSQ 528
+TKK +ISR++ FDEE +WD+ S + EPT E +EPTTP TS
Sbjct: 738 DTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEP--EPTREEPPSEEPTTPPTSP 795
Query: 527 SIAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWR 348
+ + + S ER R RS+++LYE TE +++TLFCL A+CEP+ F++A++ K WR
Sbjct: 796 TSSQIEESSS---ER-TPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWR 851
Query: 347 DAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRA 168
+AMDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQR
Sbjct: 852 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRV 911
Query: 167 GIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
GIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMDVKSAFLNG LEEEVYIEQP+
Sbjct: 912 GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 966
Score = 178 bits (452), Expect(2) = e-123
Identities = 84/97 (86%), Positives = 91/97 (93%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSKRLPKE WAEAVACAVYL NRSPT+SV GKTPQEAWSGRKPG+SHL+VFGS
Sbjct: 641 MARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSI 700
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+AHVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 701 AHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNP 737
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 294 bits (752), Expect(2) = e-122
Identities = 152/235 (64%), Positives = 182/235 (77%), Gaps = 2/235 (0%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEV--QQEPTTPSTSQ 528
+TKK +ISR++ FDEE +WD+ S + EPT E +EPTTP TS
Sbjct: 738 DTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEP--EPTREEPPSEEPTTPPTSP 795
Query: 527 SIAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWR 348
+ + + S ER R RS+++LYE TE +++TLFCL A+CEP+ F+EA++ K WR
Sbjct: 796 TSSQIEESSS---ER-TPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWR 851
Query: 347 DAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRA 168
+AMDEEI++I KNDTWELTSLP GHK IGVKWVYKAKKN+KGE+ERYKARLVAKGY QRA
Sbjct: 852 NAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRA 911
Query: 167 GIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
GIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMDVKSAFLNG LEEEVYIEQP+
Sbjct: 912 GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 966
Score = 175 bits (444), Expect(2) = e-122
Identities = 83/97 (85%), Positives = 90/97 (92%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSKRLPKE WAEAVACAVYL NRSPT+SV GKTPQEAWSGRK G+SHL+VFGS
Sbjct: 641 MARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSI 700
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+AHVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 701 AHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNP 737
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 288 bits (737), Expect(2) = e-121
Identities = 150/235 (63%), Positives = 180/235 (76%), Gaps = 2/235 (0%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEV--QQEPTTPSTSQ 528
+TKK +ISR++ FDEE +WD+ S + EPT E +EPTT TS
Sbjct: 677 DTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEP--EPTREEPPSEEPTTRPTSL 734
Query: 527 SIAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWR 348
+ + + S ER R RS+++LYE TE +++TLFCL A+CEP+ F+EA++ K WR
Sbjct: 735 TSSQIEESSS---ER-TPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWR 790
Query: 347 DAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRA 168
+AMDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQRA
Sbjct: 791 NAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRA 850
Query: 167 GIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
GIDYDEVFAPVARLET+RLIISLAAQN+WKIHQMD K AFLNG EEEVYIEQP+
Sbjct: 851 GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQ 905
Score = 178 bits (452), Expect(2) = e-121
Identities = 84/97 (86%), Positives = 91/97 (93%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSKRLPKE WAEAVACAVYL NRSPT+SV GKTPQEAWSGRKPG+SHL+VFGS
Sbjct: 580 MARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSI 639
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+AHVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 640 AHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNP 676
>ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabidopsis lyrata subsp.
lyrata]
Length = 961
Score = 292 bits (747), Expect(2) = e-121
Identities = 149/229 (65%), Positives = 177/229 (77%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQSI 522
+TKK +ISR+V FDEE +WD+ S + + ++EPTTP TS +
Sbjct: 737 DTKKTIISRNVVFDEEEEWDWKSNEDDYNFFPHFEEDDSELTRDEPPREEPTTPPTSPTS 796
Query: 521 AGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRDA 342
+ G+ S ER + RSL++LYE TE D++TLFCL A+CEP+ F+EA++ K WR+A
Sbjct: 797 SQGEESSS---ERTL-HFRSLQELYEVTENQDNLTLFCLFAECEPMDFQEAIEKKTWRNA 852
Query: 341 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 162
MDEEI+AI KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQRA I
Sbjct: 853 MDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRARI 912
Query: 161 DYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYI 15
DYDEVFAPVARLET+RLIISLAAQN+WKIHQMDVKSAFLNG LEEEVYI
Sbjct: 913 DYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYI 961
Score = 174 bits (440), Expect(2) = e-121
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSKRLPKE WAEAVA AVYL NRSPT+S+ GKTPQEAWSGRKPG+SHL+VFGS
Sbjct: 640 MARSMLKSKRLPKELWAEAVAYAVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSI 699
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
A+AHVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP
Sbjct: 700 AHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNP 736
>ref|XP_013583262.1| PREDICTED: LOW QUALITY PROTEIN: copia protein [Brassica oleracea var.
oleracea]
Length = 1184
Score = 283 bits (724), Expect(2) = e-118
Identities = 152/234 (64%), Positives = 176/234 (75%), Gaps = 2/234 (0%)
Frame = -3
Query: 698 TKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEV-QQEPTTPSTSQSI 522
TKK +I+R+V FDEE +WD+ S E +E ++EPTTP TS +
Sbjct: 628 TKKTIINRNVIFDEEGEWDWRSNNEDYNFFPSFE------EDNVEQPREEPTTPPTSPTT 681
Query: 521 AG-GDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRD 345
+ GD S ER R RSL+D+YE TE D++TLFCL ADCEP+ FEEA + K R
Sbjct: 682 SSQGDESSS---ER-TPRFRSLQDIYEVTENQDNLTLFCLFADCEPMNFEEAKEKKSXRS 737
Query: 344 AMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAG 165
AMDEEI++I KNDTW+L SLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAK YSQRAG
Sbjct: 738 AMDEEIKSIQKNDTWKLASLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKCYSQRAG 797
Query: 164 IDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQPK 3
IDYDEVFAPVARLET+RLIISLAAQ W+IHQMDVKSAFLNG LEEEVYIEQP+
Sbjct: 798 IDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQ 851
Score = 172 bits (435), Expect(2) = e-118
Identities = 81/98 (82%), Positives = 91/98 (92%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR MLKSK+LPKE WAEAVACAVY+SNRSPT+SV KTPQEA SGRKPG+SHL+VFGS
Sbjct: 530 MARSMLKSKKLPKELWAEAVACAVYISNRSPTKSVLEKTPQEAXSGRKPGVSHLRVFGSI 589
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNPK 700
A+AHVPDE+RSKLDDKSE +IFIGYD+NSKGYKLYNP+
Sbjct: 590 AHAHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPE 627
>gb|ACN78973.1| copia-type polyprotein [Glycine max]
gb|ACN78980.1| copia-type polyprotein [Glycine max]
Length = 1042
Score = 248 bits (633), Expect(2) = e-104
Identities = 128/233 (54%), Positives = 168/233 (72%), Gaps = 1/233 (0%)
Frame = -3
Query: 701 NTKKLVISRDVEFDEESDWDFGS-QXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQS 525
N K ++SRDVEF EE W++ + + + P TPST+++
Sbjct: 429 NNGKTIVSRDVEFYEEGTWNWEEKEDTYDFFPYFEEIDEEALTPNDSTPALSPTPSTNEA 488
Query: 524 IAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRD 345
+ + S ER R R++++LY+ TE I+D LFCL D +P+ F+EA+++KRWR
Sbjct: 489 SSSSEGSSS---ERP-RRMRNIQELYDETEVIND--LFCLFVDSKPLNFDEAMKDKRWRQ 542
Query: 344 AMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAG 165
AM+EEI+AI KN+TWEL+SLPKGH+AIGVKWV+K KKNAKGE+ER+KARLVAKGY Q+
Sbjct: 543 AMEEEIKAIEKNNTWELSSLPKGHEAIGVKWVFKIKKNAKGEVERHKARLVAKGYKQQYE 602
Query: 164 IDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQP 6
+DYDEVFAPVAR+ETIRL+ISLAAQ +W+I Q DVKSAFLNG LEE+VY+EQP
Sbjct: 603 VDYDEVFAPVARMETIRLLISLAAQMKWRIFQFDVKSAFLNGYLEEDVYVEQP 655
Score = 160 bits (405), Expect(2) = e-104
Identities = 73/97 (75%), Positives = 85/97 (87%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
M RCMLK+K +PKEFWAEAVACAVYLSNRSPT++V +TPQEAWSG KP + HL+VFGS
Sbjct: 332 MTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSI 391
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
AYAHVPD+ R KLDD+SE +FIGYD++SKGYKLYNP
Sbjct: 392 AYAHVPDQGRFKLDDRSEKHVFIGYDASSKGYKLYNP 428
>gb|AIC77183.1| polyprotein [Gossypium barbadense]
Length = 1369
Score = 264 bits (674), Expect(2) = e-103
Identities = 130/234 (55%), Positives = 167/234 (71%), Gaps = 3/234 (1%)
Frame = -3
Query: 698 TKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQSIA 519
TKKL+ISRDVEFDE W + + ++ E + T PS+ S +
Sbjct: 756 TKKLIISRDVEFDEADYWRWSEEEKKVEGLFFNEDDNNQEEQGDDQSPGTTAPSSPTSSS 815
Query: 518 GGDSPPSFLNERGIARARSLEDLYENTERID---DITLFCLLADCEPVTFEEAVQNKRWR 348
G S + R RSL D+Y +TE ++ D +LFCL+ +C+PVT+EEA++N +W+
Sbjct: 816 GSSSL-----DEAPTRTRSLNDIYNSTEPVETQFDYSLFCLMTECDPVTYEEAIENNKWK 870
Query: 347 DAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRA 168
AMDEEI AI +NDTWELTSLP+GH IGVKWVYK K N +G++E+YKARLVAKGY QR
Sbjct: 871 KAMDEEIAAIRRNDTWELTSLPEGHSPIGVKWVYKTKTNKEGKVEKYKARLVAKGYKQRQ 930
Query: 167 GIDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQP 6
G+DYDE+FAPVAR++TIRL+I++AAQ +WKI+QMDVKSAFLNG LEEEVYIEQP
Sbjct: 931 GVDYDEIFAPVARIDTIRLLIAVAAQYKWKIYQMDVKSAFLNGYLEEEVYIEQP 984
Score = 142 bits (358), Expect(2) = e-103
Identities = 64/97 (65%), Positives = 76/97 (78%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
MAR M+K K LP+ FWAEAV CAVYL N+ PT+SV KTP+EAWSG KP + HLK+FG
Sbjct: 658 MARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCI 717
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
AYAHVP+++R KLDD+ E IFIGYD SK Y+LYNP
Sbjct: 718 AYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAYRLYNP 754
>gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1228
Score = 234 bits (598), Expect(2) = 1e-97
Identities = 129/233 (55%), Positives = 149/233 (63%), Gaps = 2/233 (0%)
Frame = -3
Query: 698 TKKLVISRDVEFDEES--DWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQS 525
TKK++ISRDV FDEE DW F +Q E+ + PT P P TS
Sbjct: 630 TKKVIISRDVTFDEEGMWDWSFKAQKEPVINPENYEEENGHVNPT------PDEPETSSR 683
Query: 524 IAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRD 345
P+ L + + +N ++I F L ADCEPVTFEEA N+ WR
Sbjct: 684 PQRQRRLPARLEDYVVGN--------DNDPSDEEIINFALFADCEPVTFEEASNNQYWRK 735
Query: 344 AMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAG 165
AMDEEI AI KN TWELT LP K IGVKWVYK K + GEI+R KARLV KGY Q+ G
Sbjct: 736 AMDEEIHAIEKNQTWELTDLPADKKPIGVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPG 795
Query: 164 IDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQP 6
IDY EVFAPVARL+TIR++ISL+AQN WKIHQMDVKSAFLNG LEEEVY+EQP
Sbjct: 796 IDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQP 848
Score = 152 bits (383), Expect(2) = 1e-97
Identities = 69/97 (71%), Positives = 80/97 (82%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
M RCMLK+K++P+EFWAEAV+ AVY+ NR PT+SV KTP+EAWSGRKP I HLK+FG
Sbjct: 532 MVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCI 591
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
AYAHVPD+ R KLDDK E IFIGY +NSK YKLYNP
Sbjct: 592 AYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNP 628
>gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 990
Score = 234 bits (598), Expect(2) = 1e-97
Identities = 129/233 (55%), Positives = 149/233 (63%), Gaps = 2/233 (0%)
Frame = -3
Query: 698 TKKLVISRDVEFDEES--DWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQS 525
TKK++ISRDV FDEE DW F +Q E+ + PT P P TS
Sbjct: 392 TKKVIISRDVTFDEEGMWDWSFKAQKEPVINPENYEEENGHVNPT------PDEPETSSR 445
Query: 524 IAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRD 345
P+ L + + +N ++I F L ADCEPVTFEEA N+ WR
Sbjct: 446 PQRQRRLPARLEDYVVGN--------DNDPSDEEIINFALFADCEPVTFEEASNNQYWRK 497
Query: 344 AMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAG 165
AMDEEI AI KN TWELT LP K IGVKWVYK K + GEI+R KARLV KGY Q+ G
Sbjct: 498 AMDEEIHAIEKNQTWELTDLPADKKPIGVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPG 557
Query: 164 IDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQP 6
IDY EVFAPVARL+TIR++ISL+AQN WKIHQMDVKSAFLNG LEEEVY+EQP
Sbjct: 558 IDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQP 610
Score = 152 bits (383), Expect(2) = 1e-97
Identities = 69/97 (71%), Positives = 80/97 (82%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
M RCMLK+K++P+EFWAEAV+ AVY+ NR PT+SV KTP+EAWSGRKP I HLK+FG
Sbjct: 294 MVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCI 353
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
AYAHVPD+ R KLDDK E IFIGY +NSK YKLYNP
Sbjct: 354 AYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNP 390
>gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1228
Score = 234 bits (596), Expect(2) = 4e-97
Identities = 127/233 (54%), Positives = 151/233 (64%), Gaps = 2/233 (0%)
Frame = -3
Query: 698 TKKLVISRDVEFDEES--DWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQS 525
TKK++ISRDV FDEE DW F +Q E+ ++ T P P TS
Sbjct: 630 TKKVIISRDVTFDEEGMWDWSFKAQKVPAVNSENYEEENGHVDTT------PDEPETSSR 683
Query: 524 IAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRD 345
P+ L + + +N ++I F L ADCEPVTFEEA N+ WR
Sbjct: 684 PQRQRRLPARLEDYVVGN--------DNDPSDEEIINFALFADCEPVTFEEASNNQYWRK 735
Query: 344 AMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAG 165
AMDEEI AI KN TWELT LP + IGVKWVYK K + GEI+R+KARLVAKGY Q+ G
Sbjct: 736 AMDEEIHAIEKNQTWELTDLPANKRQIGVKWVYKTKYKSNGEIDRFKARLVAKGYKQKPG 795
Query: 164 IDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQP 6
IDY EVFAPVARL+TIR++IS++AQN WKIHQMDVKSAFLNG LEEEVY+EQP
Sbjct: 796 IDYFEVFAPVARLDTIRMLISISAQNNWKIHQMDVKSAFLNGTLEEEVYVEQP 848
Score = 150 bits (380), Expect(2) = 4e-97
Identities = 68/97 (70%), Positives = 80/97 (82%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
M RCMLK+K++P+EFWAEAV+ AVY+ NR PT+SV KTP+EAWSGRKP I HL++FG
Sbjct: 532 MVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLRIFGCI 591
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
AYAHVPD+ R KLDDK E IFIGY +NSK YKLYNP
Sbjct: 592 AYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNP 628
>gb|KYP58997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 946
Score = 231 bits (589), Expect(2) = 1e-96
Identities = 127/232 (54%), Positives = 148/232 (63%), Gaps = 2/232 (0%)
Frame = -3
Query: 698 TKKLVISRDVEFDEES--DWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQS 525
TKK++ISRDV FDEE DW F +Q E+ + PT P P TS
Sbjct: 705 TKKVIISRDVTFDEEGMWDWSFKAQKEPVINPENYEEENGHVNPT------PDEPETSSR 758
Query: 524 IAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRD 345
P+ L + + +N ++I F L ADCEPVTFEEA N+ WR
Sbjct: 759 PQRQRRLPARLEDYVVGN--------DNDPSDEEIINFALFADCEPVTFEEASNNQHWRK 810
Query: 344 AMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAG 165
AMDEEI AI KN TWELT LP + IGVKWVYK K + GEI+R KARLVAKGY Q+ G
Sbjct: 811 AMDEEIHAIEKNQTWELTDLPADKRPIGVKWVYKTKYKSSGEIDRLKARLVAKGYKQKPG 870
Query: 164 IDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQ 9
IDY EVFAPVARL+TI ++ISL+AQN WKIHQMDVKSAFLNG LEEEVY+EQ
Sbjct: 871 IDYFEVFAPVARLDTIHMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQ 922
Score = 152 bits (383), Expect(2) = 1e-96
Identities = 69/97 (71%), Positives = 80/97 (82%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
M RCMLK+K++P+EFWAEAV+ AVY+ NR PT+SV KTP+EAWSGRKP I HLK+FG
Sbjct: 607 MVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCI 666
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
AYAHVPD+ R KLDDK E IFIGY +NSK YKLYNP
Sbjct: 667 AYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNP 703
>gb|KYP49211.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 999
Score = 227 bits (579), Expect(2) = 2e-93
Identities = 125/233 (53%), Positives = 149/233 (63%), Gaps = 2/233 (0%)
Frame = -3
Query: 698 TKKLVISRDVEFDEES--DWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQS 525
TKK++I+RDV FDEE DW F +Q E+ ++PT P P TS
Sbjct: 440 TKKVIINRDVTFDEEGMWDWSFKAQKEPAVNPENYEEENGHVDPT------PDEPETSSR 493
Query: 524 IAGGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRD 345
P+ L + + +N ++I F L ADC+PVTFEEA N+ R
Sbjct: 494 PQRQRRLPARLEDYVVGN--------DNDPSDEEIINFALFADCKPVTFEEASNNQHLRK 545
Query: 344 AMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAG 165
AMDEEI AI KN TWELT LP + IGVKWVYK K + GEI+R KARLVAKGY Q+ G
Sbjct: 546 AMDEEIHAIEKNQTWELTDLPADKRPIGVKWVYKTKYKSSGEIDRLKARLVAKGYKQKPG 605
Query: 164 IDYDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEEEVYIEQP 6
IDY EVF PVARL+TIR++ISL+AQN WKIHQMDVKSAFLNG LEEEVY+EQP
Sbjct: 606 IDYFEVFVPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQP 658
Score = 145 bits (365), Expect(2) = 2e-93
Identities = 65/97 (67%), Positives = 78/97 (80%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
M RCMLK+K++P+EFWAEAV+ VY+ NR T+S+ KTP+EAWSGRKP I HL++FG
Sbjct: 342 MVRCMLKAKQMPREFWAEAVSTTVYILNRCLTKSICDKTPEEAWSGRKPSIHHLRIFGCI 401
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
AYAHVPD+ R KLDDK E IFIGY +NSK YKLYNP
Sbjct: 402 AYAHVPDQLRKKLDDKGEKSIFIGYSTNSKAYKLYNP 438
>gb|PNX73691.1| copia-type reverse transcriptase-like protein, partial [Trifolium
pratense]
Length = 923
Score = 230 bits (586), Expect(2) = 3e-93
Identities = 124/224 (55%), Positives = 156/224 (69%)
Frame = -3
Query: 698 TKKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXESRPIEPTIEVQQEPTTPSTSQSIA 519
+KK+++SRDV +E S WD+ + E +EV++ TS S
Sbjct: 721 SKKVIVSRDVRINEASKWDWNNST----------------EVNVEVEESSVAVPTSISTE 764
Query: 518 GGDSPPSFLNERGIARARSLEDLYENTERIDDITLFCLLADCEPVTFEEAVQNKRWRDAM 339
+S +E R RSL+DLYE TE ++ L CLLAD E + FEEA++N++W+ AM
Sbjct: 765 LEESDSE--DEPLQPRMRSLQDLYETTE---EVHLVCLLADTENINFEEALRNEKWKTAM 819
Query: 338 DEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGID 159
+EEI+AI +N+TWEL LPKG + IGVKWV+K K NA+GEIERYKARLVAKGY Q+AGID
Sbjct: 820 NEEIKAIERNNTWELAELPKGSQPIGVKWVFKKKMNAQGEIERYKARLVAKGYKQKAGID 879
Query: 158 YDEVFAPVARLETIRLIISLAAQNRWKIHQMDVKSAFLNGVLEE 27
YDEVFAPVAR+ETIRL+IS AAQ +W I QMDVKSAFLNGVLEE
Sbjct: 880 YDEVFAPVARMETIRLLISQAAQFKWPIFQMDVKSAFLNGVLEE 923
Score = 142 bits (357), Expect(2) = 3e-93
Identities = 62/97 (63%), Positives = 79/97 (81%)
Frame = -2
Query: 993 MARCMLKSKRLPKEFWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLKVFGSK 814
M R MLKSK + K+FWAEAV CA+Y+ NR P + +TPQE WSG+KP +SHLKVFGS
Sbjct: 623 MVRSMLKSKNMSKQFWAEAVQCAIYVQNRCPHAKLEDQTPQEVWSGQKPTVSHLKVFGSV 682
Query: 813 AYAHVPDERRSKLDDKSETFIFIGYDSNSKGYKLYNP 703
AYAH+PD+RR+KL+DKS+ +IFIGYD +KGYKL++P
Sbjct: 683 AYAHLPDQRRTKLEDKSQKYIFIGYDEKTKGYKLFDP 719