BLASTX nr result

ID: Rehmannia29_contig00029611 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00029611
         (641 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077785.1| prolycopene isomerase, chloroplastic [Sesamu...    99   3e-20
gb|PIN08821.1| Phytoene desaturase [Handroanthus impetiginosus]        90   3e-17
ref|XP_022873981.1| prolycopene isomerase, chloroplastic-like, p...    82   1e-14
gb|ALE33750.1| carotenoid isomerase [Erythranthe lewisii]              65   2e-08
ref|XP_012836179.1| PREDICTED: prolycopene isomerase, chloroplas...    64   2e-08

>ref|XP_011077785.1| prolycopene isomerase, chloroplastic [Sesamum indicum]
          Length = 614

 Score = 98.6 bits (244), Expect = 3e-20
 Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 6/102 (5%)
 Frame = +2

Query: 353 MNVLSCGLSSPQSIFS------LSNQKSRSQCQSIYCFDDLKSQNLSNHQIHGLGFGVSR 514
           M+++S GLSSPQS  S      L NQKSR+  Q +YCFD  K +N  +HQIHGL FGV R
Sbjct: 1   MDIMSSGLSSPQSTISDWKIRPLGNQKSRNPWQKVYCFDQWKPRNFGDHQIHGLEFGVKR 60

Query: 515 AKKYRKRNNGFTVKSVVDFDKIVESENSYVGGGDKNSYLYDA 640
           AK  R++ N F +KSVVD  K++E+E+S    GD+NS  YDA
Sbjct: 61  AK--RRQRNRFPLKSVVDVGKVLETESSST-EGDRNSSFYDA 99


>gb|PIN08821.1| Phytoene desaturase [Handroanthus impetiginosus]
          Length = 614

 Score = 90.1 bits (222), Expect = 3e-17
 Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 5/97 (5%)
 Frame = +2

Query: 353 MNVLSCGLSSPQSIFS-----LSNQKSRSQCQSIYCFDDLKSQNLSNHQIHGLGFGVSRA 517
           MN+LS GLS PQ I +     LSNQK R+Q Q IYCF  LKS N S+ QIHGL  GVSR 
Sbjct: 1   MNILSSGLSFPQPISNWKTKPLSNQKPRNQYQRIYCFAHLKSGNFSDQQIHGLESGVSRT 60

Query: 518 KKYRKRNNGFTVKSVVDFDKIVESENSYVGGGDKNSY 628
            K+RKRN+ F +KS VD D+ +++E S   G  K+ Y
Sbjct: 61  -KHRKRNHLFKLKSAVDIDRGLDTEGSSTAGDRKSCY 96


>ref|XP_022873981.1| prolycopene isomerase, chloroplastic-like, partial [Olea europaea
           var. sylvestris]
          Length = 363

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
 Frame = +2

Query: 353 MNVLSCGLSSPQ-----SIFSLSNQKSRSQCQSIYCFDDLKSQNLSNHQIHGLGFGVSRA 517
           M+VL+ GL S Q      I    NQK + +   I+CFD LK+Q  SNHQ+ GL +   RA
Sbjct: 1   MDVLNFGLCSSQLFSNCKIAPAGNQKLKCRKDGIFCFDPLKTQKFSNHQLEGLDYAFYRA 60

Query: 518 KKYRKRNNGFTVKSVVDFDKIVESENSYVGGGDKNSYLYDA 640
           K+ RKR+  F +KSVVD DK+ ES+NS++ GGD N+  YDA
Sbjct: 61  KQ-RKRDL-FRLKSVVDVDKVTESDNSFI-GGDSNTNHYDA 98


>gb|ALE33750.1| carotenoid isomerase [Erythranthe lewisii]
          Length = 615

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
 Frame = +2

Query: 353 MNVLSCGLSSPQSIFS------LSNQKSRSQCQSIYCFDDLKSQNLSNHQIHGLGFGVSR 514
           M++L+ G+SS  S+ +       SN + R+ C+ I C   LK  N S+ QIHG  FGV+R
Sbjct: 1   MSILNFGISSLHSVITNPMTKPSSNPRPRNGCKRILCSHQLKPGNFSDPQIHGSEFGVNR 60

Query: 515 AKKYRKRNNGFTVKSVVDFDKIVESENSYVGGGDKNSYLYDA 640
            ++ R R + F  KS VD  + VE+E S    GD +S  YDA
Sbjct: 61  VRRGR-RTDHFRRKSAVDLAEAVETEGSST-SGDSSSSFYDA 100


>ref|XP_012836179.1| PREDICTED: prolycopene isomerase, chloroplastic [Erythranthe
           guttata]
 gb|EYU38703.1| hypothetical protein MIMGU_mgv1a003077mg [Erythranthe guttata]
          Length = 610

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
 Frame = +2

Query: 353 MNVLSCGLSSPQSIFS------LSNQKSRSQCQSIYCFDDLKSQNLSNHQIHGLGFGVSR 514
           MN+L+ G+ +P S+ +       SN+  R+ C  I C D LKS N      HG  FG++R
Sbjct: 1   MNILNFGIPTPHSVITNPKSKPSSNRNPRNGCNRILCSDQLKSGN------HGFEFGINR 54

Query: 515 AKKYRKRNNGFTVKSVVDFDKIVESENSYVGGGDKNSYLYDA 640
           A  + KR N    KS VDF   VE+E S    GD +S  YDA
Sbjct: 55  AH-HMKRPNRIRRKSTVDFAGAVETEGSSSTSGDGSSSFYDA 95


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