BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00028742
         (801 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV45544.1| hypothetical protein F511_36917 [Dorcoceras hygro...   134   1e-61
gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposo...   147   4e-59
gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposo...   146   6e-59
gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposo...   144   3e-58
gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposo...   142   8e-58
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo...   141   1e-57
gb|KYP31883.1| Retrovirus-related Pol polyprotein from transposo...   140   3e-57
gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposo...   139   5e-57
gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposo...   139   5e-57
gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposo...   135   7e-57
gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposo...   135   7e-57
gb|KYP77343.1| Retrovirus-related Pol polyprotein from transposo...   144   1e-56
gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposo...   140   1e-56
gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposo...   134   2e-56
gb|KYP32507.1| Retrovirus-related Pol polyprotein from transposo...   137   3e-56
gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposo...   136   4e-56
gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposo...   136   4e-56
gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposo...   139   4e-56
gb|KYP59243.1| Copia protein [Cajanus cajan]                          132   4e-56
gb|KYP31629.1| Retrovirus-related Pol polyprotein from transposo...   138   6e-56

>gb|KZV45544.1| hypothetical protein F511_36917 [Dorcoceras hygrometricum]
          Length = 714

 Score =  134 bits (337), Expect(2) = 1e-61
 Identities = 60/99 (60%), Positives = 73/99 (73%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           NR MINR   KTPYEIW G+KP+++YFR+FGCKCF+HNNGK +L A + K+D GIFLGYS
Sbjct: 259 NRSMINRMHDKTPYEIWNGKKPDISYFRVFGCKCFVHNNGKRHLTALEPKSDAGIFLGYS 318

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELAD 583
           A SKAYRV N +++  EES HVVFDE +        L D
Sbjct: 319 AVSKAYRVFNNQSLTVEESAHVVFDETSFKSNSAASLHD 357



 Score =  132 bits (331), Expect(2) = 1e-61
 Identities = 62/94 (65%), Positives = 81/94 (86%)
 Frame = +3

Query: 6   KLPQLMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAER 185
           +L +L+KR+QN+KS T+ +IRSDRGTEF+N  ++ Y  + GI HELSAARTPQQNG+AER
Sbjct: 165 QLIRLLKRLQNDKSCTVNRIRSDRGTEFLNQKLSSYLDDIGIKHELSAARTPQQNGLAER 224

Query: 186 RNRTLKEAARTMLAEAGLPKRFWAEAINTACYTQ 287
           RNRTLKEAAR+M+A +G+ ++FWAEA+NT CYTQ
Sbjct: 225 RNRTLKEAARSMIAYSGISQKFWAEAVNTVCYTQ 258


>gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 963

 Score =  147 bits (371), Expect(2) = 4e-59
 Identities = 71/132 (53%), Positives = 92/132 (69%), Gaps = 3/132 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           N+ +I   L KTPYEI+ GRKPN++YFR+FGCKCF+ NNGK+ L  FDAKADE IFLGYS
Sbjct: 294 NKVLIRPILKKTPYEIYNGRKPNISYFRVFGCKCFVLNNGKEQLGKFDAKADEAIFLGYS 353

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSPYVYADVR 637
             SKAYRV NKRT++ EES+H+VFDE N       +I++L D L+QP ++  P       
Sbjct: 354 TNSKAYRVYNKRTLIVEESVHIVFDETNKQETKQTEIEDLTDLLDQPLLESEPNE----- 408

Query: 638 ALNPEEDEIDES 673
              P+E E +E+
Sbjct: 409 --KPKESESNET 418



 Score =  110 bits (274), Expect(2) = 4e-59
 Identities = 53/86 (61%), Positives = 64/86 (74%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K +QNEK+ +I  IRSD G EF N +  ++C E+ I H  SA RTPQQNGV ERRNR+L+
Sbjct: 206 KLVQNEKNSSITSIRSDHGGEFQNILFQKFCEEHDINHNFSAPRTPQQNGVVERRNRSLE 265

Query: 204 EAARTMLAEAGLPKRFWAEAINTACY 281
           E ARTML E  LPK FWA+AINTAC+
Sbjct: 266 ELARTMLNETKLPKYFWADAINTACH 291


>gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1010

 Score =  146 bits (368), Expect(2) = 6e-59
 Identities = 68/113 (60%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           N+ +I   L +TPYEI+ GRKPN++YFR+FGCKCF+ NNGK+ L  FDAKADE IFLGYS
Sbjct: 325 NKVLIRPILKRTPYEIYNGRKPNISYFRVFGCKCFVLNNGKEQLGKFDAKADEAIFLGYS 384

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSP 616
             SKAYRV NKRT+V EES+HVVFDE N       +I++L D L+QP ++  P
Sbjct: 385 TNSKAYRVYNKRTLVVEESVHVVFDETNKQETKKTEIEDLTDFLDQPPLESEP 437



 Score =  110 bits (276), Expect(2) = 6e-59
 Identities = 53/86 (61%), Positives = 64/86 (74%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K +QNEK+  I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 237 KLVQNEKNTNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 296

Query: 204 EAARTMLAEAGLPKRFWAEAINTACY 281
           E ARTML E  LPK FWA+AINTAC+
Sbjct: 297 ELARTMLNETKLPKYFWADAINTACH 322


>gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1470

 Score =  144 bits (364), Expect(2) = 3e-58
 Identities = 67/110 (60%), Positives = 84/110 (76%), Gaps = 3/110 (2%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            N+ +I   L KTPYEI+ GRKPN++YFR+FGCKCF+ NNGK+ L  FDAKADE IFLGYS
Sbjct: 879  NKVLIRPILKKTPYEIYNGRKPNISYFRVFGCKCFVLNNGKEQLGKFDAKADEAIFLGYS 938

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQ 607
              SKAYR+ NKRT+V EES+HVVFDE N       +I++L D L+QP ++
Sbjct: 939  TNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTDLLDQPLLE 988



 Score =  110 bits (274), Expect(2) = 3e-58
 Identities = 53/86 (61%), Positives = 63/86 (73%)
 Frame = +3

Query: 24   KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
            K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 791  KLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 850

Query: 204  EAARTMLAEAGLPKRFWAEAINTACY 281
            E ARTML E  LPK FWA+AINTAC+
Sbjct: 851  ELARTMLNETKLPKYFWADAINTACH 876


>gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1569

 Score =  142 bits (358), Expect(2) = 8e-58
 Identities = 65/113 (57%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            NR +I   L KTPYEI+ G+KPN++YFR+FGCKC++ NNGK+ L  FDAKADE IFLGYS
Sbjct: 884  NRVLIRPILKKTPYEIYKGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYS 943

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSP 616
              SK+YR+ NKRT+V EES+HVVFDE N       +I++L + L+QP ++  P
Sbjct: 944  TNSKSYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLNELLDQPLLESEP 996



 Score =  110 bits (276), Expect(2) = 8e-58
 Identities = 53/86 (61%), Positives = 63/86 (73%)
 Frame = +3

Query: 24   KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
            K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 796  KLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 855

Query: 204  EAARTMLAEAGLPKRFWAEAINTACY 281
            E ARTML E  LPK FWA+AINTAC+
Sbjct: 856  ELARTMLNETNLPKYFWADAINTACH 881


>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 772

 Score =  141 bits (356), Expect(2) = 1e-57
 Identities = 65/113 (57%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           N+ +I   L KTPYEI+ GRKPN++YFR+FGCKC++ NNGK+ L  FDAKADE IFLGYS
Sbjct: 325 NKVLIRPILKKTPYEIYNGRKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYS 384

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSP 616
             SKAYR+ NKRT+V EES+HVVFDE N       +I++L + L+Q  ++  P
Sbjct: 385 TNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTELLDQSLLENEP 437



 Score =  111 bits (277), Expect(2) = 1e-57
 Identities = 53/86 (61%), Positives = 63/86 (73%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 237 KLVQNEKCSNITSIRSDHGGEFQNMMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 296

Query: 204 EAARTMLAEAGLPKRFWAEAINTACY 281
           E ARTML E  LPK FWA+AINTAC+
Sbjct: 297 ELARTMLNETNLPKYFWADAINTACH 322


>gb|KYP31883.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1016

 Score =  140 bits (353), Expect(2) = 3e-57
 Identities = 66/113 (58%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            N+ +I   L KTPYEI+ GRK N++YFR+FGCKCF+ NN K+ L  FDAKADE IFLGYS
Sbjct: 885  NKVLIRPILKKTPYEIYNGRKLNISYFRVFGCKCFVLNNRKEQLGKFDAKADEAIFLGYS 944

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSP 616
              SKAYR+ NKRT+V EES+HVVFDE N       +I++L D L+QP ++  P
Sbjct: 945  TNSKAYRIYNKRTLVVEESVHVVFDETNKQETEQTEIEDLTDLLDQPLLESKP 997



 Score =  110 bits (276), Expect(2) = 3e-57
 Identities = 53/86 (61%), Positives = 64/86 (74%)
 Frame = +3

Query: 24   KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
            K +QNEK+  I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 797  KLVQNEKNSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 856

Query: 204  EAARTMLAEAGLPKRFWAEAINTACY 281
            E ARTML E  LPK FWA+AINTAC+
Sbjct: 857  ELARTMLNETKLPKYFWADAINTACH 882


>gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1564

 Score =  139 bits (350), Expect(2) = 5e-57
 Identities = 64/113 (56%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            N+ +I   L KTPYEI+ G+KPN++YFR+FGCKC++ NNGK+ L  FDAKADE IFLGYS
Sbjct: 879  NKVLIRPILKKTPYEIYKGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYS 938

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSP 616
              SKAYR+ NKRT+V EES+HVVFDE N       +I++L + L+Q  ++  P
Sbjct: 939  TNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLNELLDQSLLENEP 991



 Score =  111 bits (277), Expect(2) = 5e-57
 Identities = 53/86 (61%), Positives = 63/86 (73%)
 Frame = +3

Query: 24   KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
            K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 791  KLVQNEKCSNITSIRSDHGGEFQNILFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 850

Query: 204  EAARTMLAEAGLPKRFWAEAINTACY 281
            E ARTML E  LPK FWA+AINTAC+
Sbjct: 851  ELARTMLNETNLPKYFWADAINTACH 876


>gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1533

 Score =  139 bits (351), Expect(2) = 5e-57
 Identities = 63/113 (55%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            N+ +I   L KTPYEI+ G+KPN++YFR+FGCKC++ NNGK+ L  FDAKADE IFLGYS
Sbjct: 848  NKVLIRPILKKTPYEIYKGKKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYS 907

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSP 616
              SKAYR+ NKRT+V EES+HVVFDE N       ++++L + L+Q  ++  P
Sbjct: 908  TNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEVEDLTELLDQSLLENEP 960



 Score =  110 bits (276), Expect(2) = 5e-57
 Identities = 53/86 (61%), Positives = 63/86 (73%)
 Frame = +3

Query: 24   KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
            K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 760  KLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 819

Query: 204  EAARTMLAEAGLPKRFWAEAINTACY 281
            E ARTML E  LPK FWA+AINTAC+
Sbjct: 820  ELARTMLNETNLPKYFWADAINTACH 845


>gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1021

 Score =  135 bits (340), Expect(2) = 7e-57
 Identities = 67/133 (50%), Positives = 88/133 (66%), Gaps = 3/133 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           NR +I   L KTPYE++ GRKPN+++  IFGCKCF+ NNGKDNL  FDAK+DEGIFLGYS
Sbjct: 332 NRALIRPILKKTPYELFNGRKPNISHLHIFGCKCFVLNNGKDNLGKFDAKSDEGIFLGYS 391

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPNV---NGEDIDELADKLNQPTMQKSPYVYADVR 637
             SK++R+ NKRTM  EESIHVVFDE N+     + IDE+ +      + +    + D +
Sbjct: 392 LNSKSFRIYNKRTMTIEESIHVVFDETNLVCPRRDIIDEIVESFEDTHINEQ--THKDDK 449

Query: 638 ALNPEEDEIDESE 676
               E+  I E +
Sbjct: 450 DKEKEDSTIQEGQ 462



 Score =  114 bits (286), Expect(2) = 7e-57
 Identities = 55/87 (63%), Positives = 65/87 (74%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K IQN+K+  I+ IRSD G EF N     +C ENGI H  SA RTPQQNGV ER+NR+L+
Sbjct: 244 KLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERKNRSLE 303

Query: 204 EAARTMLAEAGLPKRFWAEAINTACYT 284
           E ARTML ++ LPK FWAEA+NTACYT
Sbjct: 304 ELARTMLNDSKLPKYFWAEAVNTACYT 330


>gb|KYP33754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1011

 Score =  135 bits (340), Expect(2) = 7e-57
 Identities = 67/133 (50%), Positives = 88/133 (66%), Gaps = 3/133 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           NR +I   L KTPYE++ GRKPN+++  IFGCKCF+ NNGKDNL  FDAK+DEGIFLGYS
Sbjct: 322 NRALIRPILKKTPYELFNGRKPNISHLHIFGCKCFVLNNGKDNLGKFDAKSDEGIFLGYS 381

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPNV---NGEDIDELADKLNQPTMQKSPYVYADVR 637
             SK++R+ NKRTM  EESIHVVFDE N+     + IDE+ +      + +    + D +
Sbjct: 382 LNSKSFRIYNKRTMTIEESIHVVFDETNLVCPRRDIIDEIVESFEDTHINEQ--THKDDK 439

Query: 638 ALNPEEDEIDESE 676
               E+  I E +
Sbjct: 440 DKEKEDSTIQEGQ 452



 Score =  114 bits (286), Expect(2) = 7e-57
 Identities = 55/87 (63%), Positives = 65/87 (74%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K IQN+K+  I+ IRSD G EF N     +C ENGI H  SA RTPQQNGV ER+NR+L+
Sbjct: 234 KLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERKNRSLE 293

Query: 204 EAARTMLAEAGLPKRFWAEAINTACYT 284
           E ARTML ++ LPK FWAEA+NTACYT
Sbjct: 294 ELARTMLNDSKLPKYFWAEAVNTACYT 320


>gb|KYP77343.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 854

 Score =  144 bits (364), Expect(2) = 1e-56
 Identities = 68/113 (60%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            N+ +I   L +TPYEI+ GRKPN++YFR+FGCKCF+ NNGK+ L  FDAKADE IFLGYS
Sbjct: 713  NKVLIRPILKRTPYEIYNGRKPNISYFRVFGCKCFVLNNGKEQLGKFDAKADEAIFLGYS 772

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSP 616
              SKAYRV NKRT+V EES+HVVFDE N        I++L D L+QP ++  P
Sbjct: 773  TNSKAYRVYNKRTLVVEESVHVVFDETNKQETKQTKIEDLIDFLDQPPLESEP 825



 Score =  104 bits (259), Expect(2) = 1e-56
 Identities = 51/86 (59%), Positives = 62/86 (72%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K +QNEK+  I  IRSD G EF N +  ++  E+ I H  SA RTPQQNGV ER+NR+L+
Sbjct: 625 KLVQNEKNTNITSIRSDHGGEFQNVLFQKFYEEHDINHNFSAPRTPQQNGVVERKNRSLE 684

Query: 204 EAARTMLAEAGLPKRFWAEAINTACY 281
           E ARTML E  LPK FWA+AINTAC+
Sbjct: 685 ELARTMLNETKLPKYFWADAINTACH 710


>gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 676

 Score =  140 bits (354), Expect(2) = 1e-56
 Identities = 65/113 (57%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           N+ +I   L KTPY+I+ GRKPN++YFR+FGCKC++ NNGK+ L  FDAKADE IFLGYS
Sbjct: 335 NKVLIRPILKKTPYKIYNGRKPNISYFRVFGCKCYVLNNGKEQLGKFDAKADEAIFLGYS 394

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSP 616
             SKAYR+ NKRT+V EES+HVVFDE N       +I+ L + L+QP ++  P
Sbjct: 395 TNSKAYRIYNKRTLVVEESVHVVFDESNKQETRKIEIEYLTELLDQPLLENEP 447



 Score =  108 bits (269), Expect(2) = 1e-56
 Identities = 52/86 (60%), Positives = 62/86 (72%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 247 KLVQNEKCSNITSIRSDHGGEFQNLMFQKFCQEHGINHNFSAPRTPQQNGVVERKNRSLE 306

Query: 204 EAARTMLAEAGLPKRFWAEAINTACY 281
           E ARTML E  LPK FWA+AINT C+
Sbjct: 307 ELARTMLNEIKLPKYFWADAINTTCH 332


>gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 900

 Score =  134 bits (336), Expect(2) = 2e-56
 Identities = 65/133 (48%), Positives = 87/133 (65%), Gaps = 3/133 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           NR +I   L KTPYE++ GRKPN+++  IFGCKCF+ NNGKDNL  FDAK+DEGIFLGYS
Sbjct: 211 NRALIRPILKKTPYELFNGRKPNISHLHIFGCKCFVLNNGKDNLGKFDAKSDEGIFLGYS 270

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPNV---NGEDIDELADKLNQPTMQKSPYVYADVR 637
             SK++R+ NKRTM  EES+HVVFDE N+     +  DE+ +      + +    + D +
Sbjct: 271 LNSKSFRIYNKRTMTIEESVHVVFDETNLVCPRRDVFDEIVESFEDTHLNEQ--THKDDK 328

Query: 638 ALNPEEDEIDESE 676
               E+  I E +
Sbjct: 329 DKEKEDSTIQEGQ 341



 Score =  114 bits (286), Expect(2) = 2e-56
 Identities = 55/87 (63%), Positives = 65/87 (74%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K IQN+K+  I+ IRSD G EF N     +C ENGI H  SA RTPQQNGV ER+NR+L+
Sbjct: 123 KLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERKNRSLE 182

Query: 204 EAARTMLAEAGLPKRFWAEAINTACYT 284
           E ARTML ++ LPK FWAEA+NTACYT
Sbjct: 183 ELARTMLNDSKLPKYFWAEAVNTACYT 209


>gb|KYP32507.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 588

 Score =  137 bits (344), Expect(2) = 3e-56
 Identities = 67/134 (50%), Positives = 89/134 (66%), Gaps = 3/134 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           N+ +I   L K PYEI+ G+KPN++YFR+FGCKC++ NNGK  L  FDAK DE IFLGYS
Sbjct: 325 NKVLIRPILKKIPYEIYKGKKPNISYFRVFGCKCYVLNNGKKQLGKFDAKVDEAIFLGYS 384

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSPYVYADVR 637
             SKAYR+ NKRT+V EES+HVVFDE N       +I++L + L+QP ++         +
Sbjct: 385 TNSKAYRIYNKRTLVVEESVHVVFDESNKQETRQTEIEDLTELLDQPLLENE-------Q 437

Query: 638 ALNPEEDEIDESER 679
              P+E+E  E  R
Sbjct: 438 NKEPKENESHEKAR 451



 Score =  111 bits (277), Expect(2) = 3e-56
 Identities = 53/86 (61%), Positives = 63/86 (73%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 237 KLVQNEKCSNITSIRSDHGGEFQNMMFRKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 296

Query: 204 EAARTMLAEAGLPKRFWAEAINTACY 281
           E ARTML E  LPK FWA+AINTAC+
Sbjct: 297 ELARTMLNETNLPKYFWADAINTACH 322


>gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
 gb|KYP55193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1530

 Score =  136 bits (343), Expect(2) = 4e-56
 Identities = 72/158 (45%), Positives = 101/158 (63%), Gaps = 6/158 (3%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            NR +I   L KTPYE++ GRKP++++F++FGCKCF+ NNGKD L  FDAKADEG+F+GYS
Sbjct: 852  NRILIRPILKKTPYELYKGRKPDISHFKVFGCKCFVLNNGKDTLGKFDAKADEGVFIGYS 911

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPNV-----NGEDIDELADKLNQPTMQKSPYVYAD 631
            A SKAYRV NK T+  EESIHV FDE N+     +  D DE+ D + Q   +       +
Sbjct: 912  AISKAYRVFNKSTLSVEESIHVTFDETNILEKGKSLNDEDEIGDSITQEEEK------LE 965

Query: 632  VRALNPEED-EIDESER*LEGLQLNDDEEDVQHNLATR 742
            ++   P ED  + +  R  + L L++   D+   ++TR
Sbjct: 966  LQQKTPSEDTSLPKEWRKPKDLSLDNILGDINKGVSTR 1003



 Score =  110 bits (276), Expect(2) = 4e-56
 Identities = 54/88 (61%), Positives = 61/88 (69%)
 Frame = +3

Query: 18   LMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRT 197
            + KRIQNEK   I  +RSD G EF N     +C ENGI H  S  RTPQQNGV ER+NR+
Sbjct: 762  ISKRIQNEKDLKIKSLRSDHGGEFQNESFQTFCEENGINHNFSVPRTPQQNGVVERKNRS 821

Query: 198  LKEAARTMLAEAGLPKRFWAEAINTACY 281
            L E AR ML E GLPK FWA+A+NTACY
Sbjct: 822  LIELARAMLNENGLPKYFWADAVNTACY 849


>gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
 gb|KYP38474.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1482

 Score =  136 bits (343), Expect(2) = 4e-56
 Identities = 72/158 (45%), Positives = 101/158 (63%), Gaps = 6/158 (3%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            NR +I   L KTPYE++ GRKP++++F++FGCKCF+ NNGKD L  FDAKADEG+F+GYS
Sbjct: 804  NRILIRPILKKTPYELYKGRKPDISHFKVFGCKCFVLNNGKDTLGKFDAKADEGVFIGYS 863

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPNV-----NGEDIDELADKLNQPTMQKSPYVYAD 631
            A SKAYRV NK T+  EESIHV FDE N+     +  D DE+ D + Q   +       +
Sbjct: 864  AISKAYRVFNKSTLSVEESIHVTFDETNILEKGKSLNDEDEIGDSITQEEEK------LE 917

Query: 632  VRALNPEED-EIDESER*LEGLQLNDDEEDVQHNLATR 742
            ++   P ED  + +  R  + L L++   D+   ++TR
Sbjct: 918  LQQKTPSEDTSLPKEWRKPKDLSLDNILGDINKGVSTR 955



 Score =  110 bits (276), Expect(2) = 4e-56
 Identities = 54/88 (61%), Positives = 61/88 (69%)
 Frame = +3

Query: 18  LMKRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRT 197
           + KRIQNEK   I  +RSD G EF N     +C ENGI H  S  RTPQQNGV ER+NR+
Sbjct: 714 ISKRIQNEKDLKIKSLRSDHGGEFQNESFQTFCEENGINHNFSVPRTPQQNGVVERKNRS 773

Query: 198 LKEAARTMLAEAGLPKRFWAEAINTACY 281
           L E AR ML E GLPK FWA+A+NTACY
Sbjct: 774 LIELARAMLNENGLPKYFWADAVNTACY 801


>gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1006

 Score =  139 bits (350), Expect(2) = 4e-56
 Identities = 63/110 (57%), Positives = 83/110 (75%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           N+ +I   L K PYEI+ G+KPN++YFR+FGCKC++ NNG + L  FDAKADE IFLGYS
Sbjct: 325 NKVLIRPILKKIPYEIYKGKKPNISYFRVFGCKCYVLNNGNEQLGKFDAKADEAIFLGYS 384

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPNVNGEDIDELADKLNQPTMQKSP 616
             SK+YR+ NKRT+V EES+HVVFDE N   E I++L + L+QP ++  P
Sbjct: 385 TNSKSYRIYNKRTLVVEESVHVVFDESNKQTE-IEDLTELLDQPLLESEP 433



 Score =  108 bits (269), Expect(2) = 4e-56
 Identities = 51/86 (59%), Positives = 63/86 (73%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K +QNEK   I  IRSD G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 237 KLVQNEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 296

Query: 204 EAARTMLAEAGLPKRFWAEAINTACY 281
           E ARTML +  LPK FWA+AINT+C+
Sbjct: 297 ELARTMLNKTNLPKYFWADAINTSCH 322


>gb|KYP59243.1| Copia protein [Cajanus cajan]
          Length = 445

 Score =  132 bits (333), Expect(2) = 4e-56
 Identities = 60/114 (52%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
 Frame = +2

Query: 287 NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
           NR +I   L KTPYE++ GRKPN+++  IFGCKCF+ NNGKDNL  FD K+DEG+FLGYS
Sbjct: 322 NRALIRPILKKTPYELFNGRKPNISHLHIFGCKCFVLNNGKDNLGKFDPKSDEGLFLGYS 381

Query: 467 AESKAYRVLNKRTMVTEESIHVVFDEPNV---NGEDIDELADKLNQPTMQKSPY 619
             SK++R+ NKRTM  EES+HV+FDE N+     + IDE+ +      + +  Y
Sbjct: 382 LNSKSFRIYNKRTMTIEESVHVIFDETNLVCPRRDVIDEIVESFEDTHLNEQTY 435



 Score =  114 bits (286), Expect(2) = 4e-56
 Identities = 55/87 (63%), Positives = 65/87 (74%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K IQN+K+  I+ IRSD G EF N     +C ENGI H  SA RTPQQNGV ER+NR+L+
Sbjct: 234 KLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERKNRSLE 293

Query: 204 EAARTMLAEAGLPKRFWAEAINTACYT 284
           E ARTML ++ LPK FWAEA+NTACYT
Sbjct: 294 ELARTMLNDSKLPKYFWAEAVNTACYT 320


>gb|KYP31629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 997

 Score =  138 bits (348), Expect(2) = 6e-56
 Identities = 67/134 (50%), Positives = 89/134 (66%), Gaps = 3/134 (2%)
 Frame = +2

Query: 287  NRCMINRQLTKTPYEIWTGRKPNVAYFRIFGCKCFIHNNGKDNLKAFDAKADEGIFLGYS 466
            N+ +I   L K PYEI+ GRKPN++YFR+FGCKCF+ NNGK+ L  FDAKADE I LGYS
Sbjct: 793  NKVLIRPILKKLPYEIYNGRKPNISYFRVFGCKCFVLNNGKEQLGKFDAKADEAISLGYS 852

Query: 467  AESKAYRVLNKRTMVTEESIHVVFDEPN---VNGEDIDELADKLNQPTMQKSPYVYADVR 637
               K YR+ NKRT++ EES+HVVFDE N       +I++L D L+QP ++  P       
Sbjct: 853  TNRKTYRIYNKRTLIVEESVHVVFDETNKQETKQTEIEDLTDLLDQPLLESEPNE----- 907

Query: 638  ALNPEEDEIDESER 679
               P+E E +E+ +
Sbjct: 908  --KPKESEQNETTK 919



 Score =  108 bits (270), Expect(2) = 6e-56
 Identities = 52/86 (60%), Positives = 64/86 (74%)
 Frame = +3

Query: 24  KRIQNEKSQTIIKIRSDRGTEFVNGIITQYCVENGIAHELSAARTPQQNGVAERRNRTLK 203
           K +QNEK+  I  IR+D G EF N +  ++C E+GI H  SA RTPQQNGV ER+NR+L+
Sbjct: 705 KVVQNEKNSNITFIRNDHGGEFQNILFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLE 764

Query: 204 EAARTMLAEAGLPKRFWAEAINTACY 281
           E ARTML E  LPK FWA+AINTAC+
Sbjct: 765 ELARTMLNETKLPKYFWADAINTACH 790