BLASTX nr result
ID: Rehmannia29_contig00028682
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00028682
(443 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011071821.1| RNA-dependent RNA polymerase 2 [Sesamum indi... 237 9e-70
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 220 4e-64
gb|PIN04805.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i... 219 3e-63
ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [E... 217 9e-63
ref|XP_022843446.1| RNA-dependent RNA polymerase 2, partial [Ole... 210 1e-60
gb|KZV56554.1| RNA-dependent RNA polymerase 2-like [Dorcoceras h... 197 1e-55
emb|CDP19325.1| unnamed protein product [Coffea canephora] 182 2e-50
ref|XP_015581229.1| PREDICTED: RNA-dependent RNA polymerase 2 is... 182 2e-50
ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 is... 182 3e-50
ref|XP_016496493.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 179 3e-50
ref|XP_019243714.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 181 7e-50
gb|PHT88160.1| RNA-dependent RNA polymerase 2 [Capsicum annuum] 180 1e-49
gb|PHT29811.1| RNA-dependent RNA polymerase 2 [Capsicum baccatum] 180 1e-49
ref|XP_016563470.1| PREDICTED: RNA-dependent RNA polymerase 2 [C... 180 1e-49
gb|PHU23857.1| RNA-dependent RNA polymerase 2 [Capsicum chinense] 180 1e-49
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 179 2e-49
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 178 5e-49
ref|XP_016448058.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 177 1e-48
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 177 1e-48
ref|XP_007036161.2| PREDICTED: RNA-dependent RNA polymerase 2 [T... 177 1e-48
>ref|XP_011071821.1| RNA-dependent RNA polymerase 2 [Sesamum indicum]
Length = 1133
Score = 237 bits (604), Expect = 9e-70
Identities = 113/146 (77%), Positives = 131/146 (89%)
Frame = +1
Query: 4 GVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTA 183
GVKFNH+SDLVP+VTN DF++PYEVLFQL SLVHTQKMSLAAVDT LF+IL LD+DTA
Sbjct: 275 GVKFNHSSDLVPLVTNYPDFKLPYEVLFQLISLVHTQKMSLAAVDTDLFQILGRLDVDTA 334
Query: 184 ILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSK 363
+LIL KMHKLHSTCY+PKSFI+N +SIT +G+++T+ SK LTDQN MSCHRVLVTPSK
Sbjct: 335 LLILNKMHKLHSTCYDPKSFIKNQSSITGQSGKSMTAVASKRLTDQNVMSCHRVLVTPSK 394
Query: 364 FFCVGPELESSNYIVKNFASYASDFL 441
+C+GPELE+SNYIVKNFASYASDFL
Sbjct: 395 IYCMGPELETSNYIVKNFASYASDFL 420
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 220 bits (561), Expect = 4e-64
Identities = 109/147 (74%), Positives = 127/147 (86%)
Frame = +1
Query: 1 EGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDT 180
E V+FNHASDLVPIV N+S F++ YEVLFQLNSLVH QK+SLAAV+T LF+ILS LDMDT
Sbjct: 273 EEVQFNHASDLVPIVKNDSVFQVAYEVLFQLNSLVHCQKLSLAAVNTDLFQILSRLDMDT 332
Query: 181 AILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPS 360
A+LIL++MHKLHSTCYEPKSF+ N SIT+HN +NL SA + L + N MSCHRVLVTP+
Sbjct: 333 ALLILKEMHKLHSTCYEPKSFVENQPSITTHNRKNLPSA--ERLIEHNIMSCHRVLVTPT 390
Query: 361 KFFCVGPELESSNYIVKNFASYASDFL 441
K FC+GPELESSNYIVKNFA YASDF+
Sbjct: 391 KIFCLGPELESSNYIVKNFADYASDFM 417
>gb|PIN04805.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
Length = 1117
Score = 219 bits (557), Expect = 3e-63
Identities = 108/147 (73%), Positives = 127/147 (86%)
Frame = +1
Query: 1 EGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDT 180
+G+KF+ SDLVPIV NNSDFR+PYEVLFQLNSL+HTQKMSLAAVDT LFEILS LD+DT
Sbjct: 269 DGLKFDSTSDLVPIVANNSDFRVPYEVLFQLNSLIHTQKMSLAAVDTDLFEILSRLDIDT 328
Query: 181 AILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPS 360
A+LIL++MHKL STCYEPKSFI++ +S+ S +G+N+TS N MSCHRVLVTP+
Sbjct: 329 ALLILKQMHKLQSTCYEPKSFIKDLSSMNSPDGKNITS--------PNVMSCHRVLVTPA 380
Query: 361 KFFCVGPELESSNYIVKNFASYASDFL 441
K FC+GPELESSNYIVKNF+SYASDFL
Sbjct: 381 KIFCLGPELESSNYIVKNFSSYASDFL 407
>ref|XP_012831187.1| PREDICTED: RNA-dependent RNA polymerase 2 [Erythranthe guttata]
gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Erythranthe guttata]
Length = 1135
Score = 217 bits (553), Expect = 9e-63
Identities = 106/149 (71%), Positives = 124/149 (83%), Gaps = 2/149 (1%)
Frame = +1
Query: 1 EGVKFNHA--SDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDM 174
+G +FN+A SDLVPI+ N DFR+PYEVLFQ+NSLVHTQKMSLA+VD LF+ LS LDM
Sbjct: 269 DGARFNNAPSSDLVPIIPNCPDFRVPYEVLFQINSLVHTQKMSLASVDNNLFQTLSELDM 328
Query: 175 DTAILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVT 354
D A+LIL KMHKLHSTCYEPKSFI +S++ HN +NL S + K L D N MSCHR+LVT
Sbjct: 329 DRALLILAKMHKLHSTCYEPKSFIETRSSMSIHNVKNLPSESFKRLKDHNVMSCHRILVT 388
Query: 355 PSKFFCVGPELESSNYIVKNFASYASDFL 441
PS+ FCVGPELESSNYIVKNFAS+ASDF+
Sbjct: 389 PSRIFCVGPELESSNYIVKNFASHASDFV 417
>ref|XP_022843446.1| RNA-dependent RNA polymerase 2, partial [Olea europaea var.
sylvestris]
Length = 949
Score = 210 bits (535), Expect = 1e-60
Identities = 99/147 (67%), Positives = 124/147 (84%)
Frame = +1
Query: 1 EGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDT 180
EG KF+ AS+LVP+VTN+ DF++ YEVLFQLNSLVHT K+SLAAVDT L+++LS +D+DT
Sbjct: 90 EGKKFHSASNLVPLVTNHLDFKLGYEVLFQLNSLVHTHKLSLAAVDTDLYQLLSGIDIDT 149
Query: 181 AILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPS 360
A+L+LQKMHKL STC+EP SFI++H + + +G+NL SA L + N MSCHRVLVTPS
Sbjct: 150 AVLVLQKMHKLESTCFEPVSFIKSHLHVVNRDGKNLASAAYNRLINHNVMSCHRVLVTPS 209
Query: 361 KFFCVGPELESSNYIVKNFASYASDFL 441
K +C GPELE+SNYIVKNFASYASDF+
Sbjct: 210 KIYCSGPELETSNYIVKNFASYASDFV 236
>gb|KZV56554.1| RNA-dependent RNA polymerase 2-like [Dorcoceras hygrometricum]
Length = 1143
Score = 197 bits (500), Expect = 1e-55
Identities = 94/143 (65%), Positives = 120/143 (83%)
Frame = +1
Query: 13 FNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILI 192
F + +LVPIV N+SDF + YEVL+QLNSLVHTQK+SLA+V+ LF ILS+LD++TA+L
Sbjct: 275 FPSSPNLVPIVANSSDFSLDYEVLYQLNSLVHTQKLSLASVNNDLFHILSTLDVNTALLA 334
Query: 193 LQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFC 372
LQKMHKL S+CYEP SFI+N + I S NG+NLTS+ K LT+ N M+CHR+LVTPS+ FC
Sbjct: 335 LQKMHKLPSSCYEPLSFIKNESEIISQNGQNLTSSILKGLTNLNMMNCHRILVTPSRIFC 394
Query: 373 VGPELESSNYIVKNFASYASDFL 441
+GPELE+SNYIVK++ASY SDF+
Sbjct: 395 MGPELENSNYIVKHYASYGSDFV 417
>emb|CDP19325.1| unnamed protein product [Coffea canephora]
Length = 1120
Score = 182 bits (462), Expect = 2e-50
Identities = 90/147 (61%), Positives = 111/147 (75%)
Frame = +1
Query: 1 EGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDT 180
EG +F+ S+LVP+V SD +I YE+LFQLNSLVHTQK+SL AV++ L E+LS LDMD
Sbjct: 265 EGEQFSTTSELVPLVKCCSDIKITYEILFQLNSLVHTQKLSLGAVNSELMEVLSGLDMDI 324
Query: 181 AILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPS 360
A+ ILQKMHKL + CY+P SFI + N NL S++ + N M+CHRVLVTPS
Sbjct: 325 AMPILQKMHKLETMCYDPVSFINKRLHVMGENASNLRSSSYGRPKNNNMMTCHRVLVTPS 384
Query: 361 KFFCVGPELESSNYIVKNFASYASDFL 441
K +C+GPELE+SNYIVKNFASYASDFL
Sbjct: 385 KVYCLGPELETSNYIVKNFASYASDFL 411
>ref|XP_015581229.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X2 [Ricinus
communis]
Length = 930
Score = 182 bits (461), Expect = 2e-50
Identities = 86/147 (58%), Positives = 113/147 (76%)
Frame = +1
Query: 1 EGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDT 180
+G ++ AS++VP+V SD ++PYE+LFQLNSLVHTQK+SLAAVDT L L SL +DT
Sbjct: 59 DGEEWGSASEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDT 118
Query: 181 AILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPS 360
A +ILQK+HKL TCY+P +FI+ + N + ++SK+L + N MSCHR L+TPS
Sbjct: 119 ATMILQKLHKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPS 178
Query: 361 KFFCVGPELESSNYIVKNFASYASDFL 441
K +C+GPELESSNY+VKNFASYASDF+
Sbjct: 179 KIYCLGPELESSNYVVKNFASYASDFM 205
>ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Ricinus
communis]
gb|EEF52033.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
Length = 983
Score = 182 bits (461), Expect = 3e-50
Identities = 86/147 (58%), Positives = 113/147 (76%)
Frame = +1
Query: 1 EGVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDT 180
+G ++ AS++VP+V SD ++PYE+LFQLNSLVHTQK+SLAAVDT L L SL +DT
Sbjct: 112 DGEEWGSASEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDT 171
Query: 181 AILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPS 360
A +ILQK+HKL TCY+P +FI+ + N + ++SK+L + N MSCHR L+TPS
Sbjct: 172 ATMILQKLHKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPS 231
Query: 361 KFFCVGPELESSNYIVKNFASYASDFL 441
K +C+GPELESSNY+VKNFASYASDF+
Sbjct: 232 KIYCLGPELESSNYVVKNFASYASDFM 258
>ref|XP_016496493.1| PREDICTED: RNA-dependent RNA polymerase 2-like, partial [Nicotiana
tabacum]
Length = 683
Score = 179 bits (455), Expect = 3e-50
Identities = 86/140 (61%), Positives = 110/140 (78%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+LVP+ + SD ++PYE+LFQLNSLVHT K+SL AV T L E+LS L++DTA++ILQK
Sbjct: 272 ASELVPLASFPSDLKLPYEILFQLNSLVHTHKISLGAVKTDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL S+C+EP FI+ + N +N S++ L +QN MS HRVLVTPSK +C+GP
Sbjct: 332 MHKLQSSCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>ref|XP_019243714.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana attenuata]
gb|OIT04938.1| rna-dependent rna polymerase 2 [Nicotiana attenuata]
Length = 1120
Score = 181 bits (458), Expect = 7e-50
Identities = 86/140 (61%), Positives = 110/140 (78%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+LVP+ + SD ++PYE+LFQLNSL+HT K+SL AV T L E+LS L++DTA++ILQK
Sbjct: 272 ASELVPLASFPSDLKLPYEILFQLNSLIHTHKISLGAVKTDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL STC+EP FI+ + N +N S++ L +QN MS HRVLVTPSK +C+GP
Sbjct: 332 MHKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>gb|PHT88160.1| RNA-dependent RNA polymerase 2 [Capsicum annuum]
Length = 1130
Score = 180 bits (457), Expect = 1e-49
Identities = 87/140 (62%), Positives = 107/140 (76%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+ VP+V SD +PYE+LFQLNSLVHTQK+SL A+D L E+LS L++DTA++ILQK
Sbjct: 272 ASEFVPLVNFPSDLNLPYEILFQLNSLVHTQKISLGAIDRDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL STC+EP FI+ + N +N S + L + N MS HRVLVTPSK +CVGP
Sbjct: 332 MHKLQSTCFEPVIFIKTRLHVLGKNNKNQPSLSYSRLVNHNMMSVHRVLVTPSKIYCVGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>gb|PHT29811.1| RNA-dependent RNA polymerase 2 [Capsicum baccatum]
Length = 1130
Score = 180 bits (457), Expect = 1e-49
Identities = 87/140 (62%), Positives = 107/140 (76%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+ VP+V SD +PYE+LFQLNSLVHTQK+SL A+D L E+LS L++DTA++ILQK
Sbjct: 272 ASEFVPLVNFPSDLNLPYEILFQLNSLVHTQKISLGAIDRDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL STC+EP FI+ + N +N S + L + N MS HRVLVTPSK +CVGP
Sbjct: 332 MHKLQSTCFEPVIFIKTRLHVLGKNNKNQPSLSYSRLVNHNMMSVHRVLVTPSKIYCVGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>ref|XP_016563470.1| PREDICTED: RNA-dependent RNA polymerase 2 [Capsicum annuum]
Length = 1130
Score = 180 bits (457), Expect = 1e-49
Identities = 87/140 (62%), Positives = 107/140 (76%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+ VP+V SD +PYE+LFQLNSLVHTQK+SL A+D L E+LS L++DTA++ILQK
Sbjct: 272 ASEFVPLVNFPSDLNLPYEILFQLNSLVHTQKISLGAIDRDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL STC+EP FI+ + N +N S + L + N MS HRVLVTPSK +CVGP
Sbjct: 332 MHKLQSTCFEPVIFIKTRLHVLGKNNKNQPSLSYSRLVNHNMMSVHRVLVTPSKIYCVGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>gb|PHU23857.1| RNA-dependent RNA polymerase 2 [Capsicum chinense]
Length = 1130
Score = 180 bits (456), Expect = 1e-49
Identities = 87/140 (62%), Positives = 107/140 (76%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+ VP+V SD +PYE+LFQLNSLVHTQK+SL A+D L E+LS L++DTA++ILQK
Sbjct: 272 ASEFVPLVNFPSDLNLPYEILFQLNSLVHTQKISLGAIDRDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL STC+EP FI+ + N +N S + L + N MS HRVLVTPSK +CVGP
Sbjct: 332 MHKLQSTCFEPVIFIKTRLHVLCKNNKNQPSLSYSRLVNHNMMSVHRVLVTPSKIYCVGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana
tomentosiformis]
Length = 1120
Score = 179 bits (455), Expect = 2e-49
Identities = 86/140 (61%), Positives = 110/140 (78%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+LVP+ + SD ++PYE+LFQLNSLVHT K+SL AV T L E+LS L++DTA++ILQK
Sbjct: 272 ASELVPLASFPSDLKLPYEILFQLNSLVHTHKISLGAVKTDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL S+C+EP FI+ + N +N S++ L +QN MS HRVLVTPSK +C+GP
Sbjct: 332 MHKLQSSCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 178 bits (452), Expect = 5e-49
Identities = 85/140 (60%), Positives = 109/140 (77%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+LVP+ + SD ++PYE+LFQLNSL+HT K+SL AV T L E+LS L++DTA++ILQK
Sbjct: 272 ASELVPLASFPSDLKLPYEILFQLNSLIHTHKISLGAVKTDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL STC+EP FI+ + N +N S++ L +QN MS HRVLVTPSK +C+GP
Sbjct: 332 MHKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFA +ASDFL
Sbjct: 392 ELETSNYIVKNFALHASDFL 411
>ref|XP_016448058.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tabacum]
Length = 1120
Score = 177 bits (449), Expect = 1e-48
Identities = 85/140 (60%), Positives = 109/140 (77%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+LVP+ + SD ++PYE+LFQLNSLVH+ K+SL AV T L E+LS L++DTA++ILQK
Sbjct: 272 ASELVPLASFPSDLKLPYEILFQLNSLVHSHKISLGAVKTDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL STC+EP FI+ + +N S++ L +QN MS HRVLVTPSK +C+GP
Sbjct: 332 MHKLQSTCFEPVPFIKTRLHVLGKTSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
Length = 1120
Score = 177 bits (449), Expect = 1e-48
Identities = 85/140 (60%), Positives = 109/140 (77%)
Frame = +1
Query: 22 ASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTAILILQK 201
AS+LVP+ + SD ++PYE+LFQLNSLVH+ K+SL AV T L E+LS L++DTA++ILQK
Sbjct: 272 ASELVPLASFPSDLKLPYEILFQLNSLVHSHKISLGAVKTDLIEVLSKLELDTAMMILQK 331
Query: 202 MHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSKFFCVGP 381
MHKL STC+EP FI+ + +N S++ L +QN MS HRVLVTPSK +C+GP
Sbjct: 332 MHKLQSTCFEPVPFIKTRLHVLGKTSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGP 391
Query: 382 ELESSNYIVKNFASYASDFL 441
ELE+SNYIVKNFAS+ASDFL
Sbjct: 392 ELETSNYIVKNFASHASDFL 411
>ref|XP_007036161.2| PREDICTED: RNA-dependent RNA polymerase 2 [Theobroma cacao]
Length = 1149
Score = 177 bits (449), Expect = 1e-48
Identities = 82/146 (56%), Positives = 112/146 (76%)
Frame = +1
Query: 4 GVKFNHASDLVPIVTNNSDFRIPYEVLFQLNSLVHTQKMSLAAVDTGLFEILSSLDMDTA 183
G +F+ A ++VP+V SD ++ YE+LFQLNSLVHTQK+S+A+VDT L +IL L ++TA
Sbjct: 271 GGEFSSAPEIVPLVKGPSDSKLAYEILFQLNSLVHTQKISIASVDTDLIDILRVLPVETA 330
Query: 184 ILILQKMHKLHSTCYEPKSFIRNHTSITSHNGENLTSANSKSLTDQNTMSCHRVLVTPSK 363
++ILQK HKL STCY P SF++ + ++ N ++ ++ K L D N MSCHR LVTPSK
Sbjct: 331 VMILQKFHKLLSTCYNPVSFVKENLPVSERNFQSRPLSSFKRLIDHNVMSCHRALVTPSK 390
Query: 364 FFCVGPELESSNYIVKNFASYASDFL 441
+C+GPELE+SNY+VKNFA YASDF+
Sbjct: 391 IYCLGPELETSNYVVKNFAEYASDFM 416