BLASTX nr result

ID: Rehmannia29_contig00028460 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00028460
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF51216.1| conserved hypothetical protein [Ricinus communis]       56   2e-06

>gb|EEF51216.1| conserved hypothetical protein [Ricinus communis]
          Length = 358

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = -3

Query: 342 SYVPENYRSLIQAMITFVIVLHDKAYKSLLNGFSGQNLVVLDGSLKFWKAADPTPV--TM 169
           +YVP  YR LI++M+TFV+ +HD  Y +   GF   N+V+ +  +KFWK    T    + 
Sbjct: 111 NYVPNEYRKLIKSMVTFVVDIHDAGYSTA--GFGMPNIVIKNEVVKFWKVQFITASMGSK 168

Query: 168 KNDLR*LYHVPTNKLSTGGYTAIPSDMDHLI 76
            ND   L+ V  +  S   +  +P +M H +
Sbjct: 169 NNDFICLHRVVESLFSGEQHLHLPREMQHFL 199


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