BLASTX nr result

ID: Rehmannia29_contig00028215 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00028215
         (497 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845643.1| PREDICTED: BEL1-like homeodomain protein 4 [...    59   4e-07
gb|PIM98730.1| Transcription factor MEIS1 [Handroanthus impetigi...    59   5e-07

>ref|XP_012845643.1| PREDICTED: BEL1-like homeodomain protein 4 [Erythranthe guttata]
 gb|EYU45099.1| hypothetical protein MIMGU_mgv1a003541mg [Erythranthe guttata]
          Length = 579

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 52/141 (36%), Positives = 60/141 (42%), Gaps = 7/141 (4%)
 Frame = +1

Query: 4   QEDQVQPSTEAETSAPKSD------NNYKPTAAQTPILLGDKNLEINAPENDPSENTIIN 165
           Q+ +VQPST  E   PK D      +    TA  +  L    N      ENDPS N  + 
Sbjct: 461 QDHEVQPSTAQE---PKQDASTSMISTTTTTAGPSSSLTPTHNAASALQENDPSLNHTVR 517

Query: 166 INSRQQAGKQVVMQPGGXXXXXXXXXXEYRCLMAXXXXXXXXXXXXXXXXXXEVSLTLGL 345
              +  AG      P            EYR  M                   +VSLTLGL
Sbjct: 518 YRGKNPAGGAGPQPP------------EYRYFMTRDAAEAGVGGG-------DVSLTLGL 558

Query: 346 RRSEN-VPRMSQLSIRDFEAY 405
           R SEN VPRMS+LSIRDFEAY
Sbjct: 559 RHSENHVPRMSRLSIRDFEAY 579


>gb|PIM98730.1| Transcription factor MEIS1 [Handroanthus impetiginosus]
          Length = 571

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 57/144 (39%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
 Frame = +1

Query: 7   EDQVQPST-----EAETSAPKSDNNYKPTAAQTPILLGDKNLEINAPENDPSENTIININ 171
           +D+VQ  T     + +T+ PK DNN  P  AQT              E DPS        
Sbjct: 458 QDEVQHPTASSGKQEKTTEPKPDNNV-PCTAQT-----------ERSEKDPS-------- 497

Query: 172 SRQQAGKQVVMQPGGXXXXXXXXXXEYRCLM-----AXXXXXXXXXXXXXXXXXXEVSLT 336
                GKQV  Q GG          EYRC M                        EVSLT
Sbjct: 498 -----GKQVA-QAGGAASLPA----EYRCFMEDPEAVLGSEFGLVAGSGGNVSQGEVSLT 547

Query: 337 LGLRRSEN-VPRMSQLSIRDFEAY 405
           LGLR SEN VPRMSQLSIRDFEAY
Sbjct: 548 LGLRHSENHVPRMSQLSIRDFEAY 571


Top