BLASTX nr result

ID: Rehmannia29_contig00028203 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00028203
         (694 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    51   5e-12
gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    53   5e-08
ref|XP_019150325.1| PREDICTED: replication protein A 70 kDa DNA-...    52   1e-05
ref|XP_019197333.1| PREDICTED: uncharacterized protein LOC109191...    52   1e-05

>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
           hygrometricum]
          Length = 388

 Score = 51.2 bits (121), Expect(2) = 5e-12
 Identities = 25/52 (48%), Positives = 35/52 (67%)
 Frame = -2

Query: 678 KYRACATKHKILFHGKTNIFEMFDKSFPRFMYAFKDFNEVSDVEHVGDTMLF 523
           KY+  A+K+KI F  KT++ E+FD SFP  M+ FK F  V + E + +TMLF
Sbjct: 153 KYKTTASKYKINFITKTHVCEIFDDSFPSMMFDFKSFTNVKNAE-IEETMLF 203



 Score = 48.1 bits (113), Expect(2) = 5e-12
 Identities = 31/102 (30%), Positives = 46/102 (45%)
 Frame = -1

Query: 430 KVVSMQSAQKKEVAGRTTRFIDIILEDLE*N*YIFLDNVIICVKKHVLIFLKTFKL**QS 251
           +VV+  S Q KE  GR TR + I+L D E N                             
Sbjct: 208 QVVARDSPQSKEFGGRETRLLYIVLHDYEDN----------------------------K 239

Query: 250 YTCTL*EEYVDTILPHLEANGLEPIVIIVQMCRAKVFQGNFK 125
            +CT   ++V+ I+ HLE +     +II+QMCR+K F+G  +
Sbjct: 240 LSCTPWGDFVNDIMTHLEKSRNNQAIIILQMCRSKQFRGGIR 281


>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 52.8 bits (125), Expect(2) = 5e-08
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = -2

Query: 678 KYRACATKHKILFHGKTNIFEMFDKSFPRFMYAFKDFNEVSDVEHVGDTMLF 523
           KY+   +K+KI F  KT++ E+FD SFP  M+ FK FN+V + E + +TMLF
Sbjct: 73  KYKTTTSKYKINFITKTHVCEIFDDSFPSIMFDFKSFNDVKNAE-IEETMLF 123



 Score = 33.1 bits (74), Expect(2) = 5e-08
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -1

Query: 430 KVVSMQSAQKKEVAGRTTRFIDIILEDLE 344
           +VV+  S Q +E  GR TR +DI+L+D E
Sbjct: 128 QVVARDSPQSREFGGRETRLLDIVLQDYE 156


>ref|XP_019150325.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
           [Ipomoea nil]
          Length = 533

 Score = 51.6 bits (122), Expect(2) = 1e-05
 Identities = 29/106 (27%), Positives = 52/106 (49%)
 Frame = -1

Query: 430 KVVSMQSAQKKEVAGRTTRFIDIILEDLE*N*YIFLDNVIICVKKHVLIFLKTFKL**QS 251
           +VV + S  +K +AG+ T+ ID +LED+  N                             
Sbjct: 148 RVVEIYSPLEKVIAGKKTKLIDFVLEDMSKN----------------------------Q 179

Query: 250 YTCTL*EEYVDTILPHLEANGLEPIVIIVQMCRAKVFQGNFKF*IC 113
             CTL +++VD ++P+   +  +P+++++Q+CRAK F  N +  IC
Sbjct: 180 IKCTLWDDHVDQLIPYFNQDVTDPVILLIQLCRAK-FMDNGEVRIC 224



 Score = 26.2 bits (56), Expect(2) = 1e-05
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = -2

Query: 678 KYRACATKHKILFHGKTNIFEMFDKSFPRFMYAFKDFNEVSDVEHVGDTML 526
           KY+    ++ I F   T + +     FP+ M+ FK F  +   + V + +L
Sbjct: 92  KYKTSTLRYMIKFKYDTLVKQYKRIKFPKTMFRFKSFPAILSKQDVDEKVL 142


>ref|XP_019197333.1| PREDICTED: uncharacterized protein LOC109191207 [Ipomoea nil]
          Length = 479

 Score = 51.6 bits (122), Expect(2) = 1e-05
 Identities = 29/106 (27%), Positives = 52/106 (49%)
 Frame = -1

Query: 430 KVVSMQSAQKKEVAGRTTRFIDIILEDLE*N*YIFLDNVIICVKKHVLIFLKTFKL**QS 251
           +VV + S  +K +AG+ T+ ID +LED+  N                             
Sbjct: 145 RVVEIYSPLEKVIAGKKTKLIDFVLEDMSKN----------------------------Q 176

Query: 250 YTCTL*EEYVDTILPHLEANGLEPIVIIVQMCRAKVFQGNFKF*IC 113
             CTL +++VD ++P+   +  +P+++++Q+CRAK F  N +  IC
Sbjct: 177 IKCTLWDDHVDQLIPYFNQDVTDPVILLIQLCRAK-FMDNGEVRIC 221



 Score = 26.2 bits (56), Expect(2) = 1e-05
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = -2

Query: 678 KYRACATKHKILFHGKTNIFEMFDKSFPRFMYAFKDFNEVSDVEHVGDTML 526
           KY+    ++ I F   T + +     FP+ M+ FK F  +   + V + +L
Sbjct: 89  KYKTSTLRYMIKFKYDTLVKQYKRIKFPKTMFRFKSFPAILSKQDVDEKVL 139


Top