BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00027958
         (785 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098529.1| CRM-domain containing factor CFM2, chloropla...   317   1e-97
gb|PIN23560.1| hypothetical protein CDL12_03706 [Handroanthus im...   276   4e-85
ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron sp...   264   5e-78
ref|XP_022879421.1| CRM-domain containing factor CFM2, chloropla...   197   5e-54
gb|KZV55871.1| hypothetical protein F511_15721 [Dorcoceras hygro...   162   1e-41
gb|PHT91786.1| hypothetical protein T459_06899 [Capsicum annuum]      141   2e-34
gb|PHU27593.1| hypothetical protein BC332_05925 [Capsicum chinense]   140   5e-34
ref|XP_016561487.1| PREDICTED: CRM-domain containing factor CFM2...   140   7e-34
gb|PHT57248.1| hypothetical protein CQW23_05734 [Capsicum baccatum]   137   6e-33
ref|XP_016561486.1| PREDICTED: CRM-domain containing factor CFM2...   137   8e-33
ref|XP_015066170.1| PREDICTED: chloroplastic group IIA intron sp...   137   8e-33
ref|XP_011047274.1| PREDICTED: chloroplastic group IIA intron sp...   136   1e-32
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   136   1e-32
gb|POF15812.1| crm-domain containing factor cfm2, chloroplastic ...   135   3e-32
ref|XP_023908424.1| CRM-domain containing factor CFM2, chloropla...   135   4e-32
ref|XP_023908420.1| CRM-domain containing factor CFM2, chloropla...   135   4e-32
ref|XP_023908422.1| CRM-domain containing factor CFM2, chloropla...   135   4e-32
ref|XP_004232267.1| PREDICTED: CRM-domain containing factor CFM2...   134   9e-32
ref|XP_015162642.1| PREDICTED: chloroplastic group IIA intron sp...   131   6e-31
ref|XP_010687964.1| PREDICTED: CRM-domain containing factor CFM2...   131   8e-31

>ref|XP_011098529.1| CRM-domain containing factor CFM2, chloroplastic [Sesamum indicum]
          Length = 1054

 Score =  317 bits (813), Expect = 1e-97
 Identities = 173/264 (65%), Positives = 202/264 (76%), Gaps = 3/264 (1%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNYTRPASLRPQTLLSKREAM+RS+EAQRRESLKLHVLKLSRNIDE+KL+MAK+ D 
Sbjct: 673  YRGKNYTRPASLRPQTLLSKREAMRRSLEAQRRESLKLHVLKLSRNIDEMKLQMAKEGDP 732

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPADETRESHGTDATFKA 426
            +DMQLTK LE GFV+Q+  +N YN  +   +DPE+  QSY G+ A+E R+S GTD T K 
Sbjct: 733  NDMQLTKDLELGFVDQKNSKNHYNKDKALHQDPESAHQSYFGELANEARDSPGTDDTSKD 792

Query: 425  DEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQ 246
             ED MH +K S DI Q+   G VS  S VKG YLF TT+ +LQPRSLP+ET+G L+ NEQ
Sbjct: 793  PEDLMHTAKDSEDIVQQDSSGYVSLHSAVKGNYLFETTEEELQPRSLPQETKGLLSINEQ 852

Query: 245  --NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKA-NERPLAMPS 75
              ++ELS   R Q R SSSTT  I  HTGGR S   G+QN +LEPSV+KA +E   AMP 
Sbjct: 853  SGHIELSSSLRFQDRTSSSTTTCIQSHTGGRDSSTGGFQNVELEPSVKKALSEATAAMPF 912

Query: 74   RALQLSNRERLLLRKQALKMKNIP 3
            RALQLSNRERLLLRKQALKMK +P
Sbjct: 913  RALQLSNRERLLLRKQALKMKKLP 936


>gb|PIN23560.1| hypothetical protein CDL12_03706 [Handroanthus impetiginosus]
          Length = 686

 Score =  276 bits (707), Expect = 4e-85
 Identities = 162/277 (58%), Positives = 192/277 (69%), Gaps = 16/277 (5%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNYTRPASLRP+TLLSKREAMKRS+EAQRRESLKLHVLKLS+NI+ELKLKMAKD+D 
Sbjct: 281  YRGKNYTRPASLRPRTLLSKREAMKRSLEAQRRESLKLHVLKLSQNIEELKLKMAKDEDN 340

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQK-------------DPENDRQSYLGDPADE 465
             DM+LT   + GF EQ   EN +N  +IS +             D E+D Q Y G+PA++
Sbjct: 341  DDMKLTDDWKLGFAEQGTNENHFNYNKISHEESETESNDQPYFGDLESDGQFYFGEPANK 400

Query: 464  TRESHGTDATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSL 285
              ESH T AT    E+PMH SK SV I Q+ ++GDVSS+S +K  YLF TT+A++QPRSL
Sbjct: 401  AGESHETSATSTEPEEPMHTSKESVLIVQQDVQGDVSSESTIKRNYLFATTEAEIQPRSL 460

Query: 284  PKETRGFLNTNEQ--NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSV 111
            P +T+GFLN NEQ  N E+S   RSQ + SS T           G D  GYQNA+LE   
Sbjct: 461  PNKTKGFLNRNEQNGNAEVSSSFRSQDQTSSRTAT---------GKDSVGYQNAELEYLN 511

Query: 110  QKA-NERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            QKA +ERP     RALQLSN+ERLLLRKQALKM   P
Sbjct: 512  QKATDERPSV---RALQLSNKERLLLRKQALKMNKPP 545


>ref|XP_012849118.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Erythranthe guttata]
 gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Erythranthe guttata]
          Length = 1040

 Score =  264 bits (675), Expect = 5e-78
 Identities = 153/264 (57%), Positives = 178/264 (67%), Gaps = 3/264 (1%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNYTRPASLRPQTLLSKREAMKRS+EAQRRESLKLHVLKLS+NIDELKLKMAKD++T
Sbjct: 676  YRGKNYTRPASLRPQTLLSKREAMKRSLEAQRRESLKLHVLKLSKNIDELKLKMAKDENT 735

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPADETRESHGTDATFKA 426
            +   LT+ LE GFV                                  RESH TDAT K 
Sbjct: 736  NRPHLTEDLELGFV----------------------------------RESHETDATNKD 761

Query: 425  DEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQ 246
             E+PMH S+ +V I+Q+ + GDVS QS VK  YLF TT+A++QP SL  E   F + N Q
Sbjct: 762  PEEPMHISEDTVHIAQKDLPGDVSLQSEVKVNYLFETTEAEVQPTSLSNEGNSFSDKNNQ 821

Query: 245  --NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQK-ANERPLAMPS 75
              N+E    PRSQ R +SS + YI P TG R SDG GY+N  +EPS QK   ERP  MPS
Sbjct: 822  IGNMEFVRSPRSQDRRNSSPSTYIRPQTGRRKSDGGGYRNVDIEPSGQKPMKERPSLMPS 881

Query: 74   RALQLSNRERLLLRKQALKMKNIP 3
            R++QLSN+ERLLLRKQAL+MK IP
Sbjct: 882  RSVQLSNKERLLLRKQALRMKKIP 905


>ref|XP_022879421.1| CRM-domain containing factor CFM2, chloroplastic [Olea europaea var.
            sylvestris]
          Length = 1067

 Score =  197 bits (502), Expect = 5e-54
 Identities = 129/268 (48%), Positives = 171/268 (63%), Gaps = 7/268 (2%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKM--AKDK 612
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKL+RNIDELKL++  A+DK
Sbjct: 689  YRGKNYKRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLTRNIDELKLRLSHAEDK 748

Query: 611  DTSDMQLTKALEHGFV-EQEIVENRYNDGEISQKDPENDRQSYLGDPA-DETRESHGTDA 438
            D++DMQL K LEH  V E E+ +        S ++P+ D QSY G  + +E R SH  +A
Sbjct: 749  DSNDMQLAKDLEHEVVKEGEMNKIPVTQDAKSDRNPKIDHQSYSGSASLEEARGSH--EA 806

Query: 437  TFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLN 258
                 +   +     V + Q+ +    S QS  KG+ +F  ++A LQ +S+ KET+G L+
Sbjct: 807  VVTCTDTMGYMDTAMVSVHQQDL--GESLQSEAKGEDVFYVSEAGLQLKSVTKETKGSLD 864

Query: 257  TNEQNVELSHYPRSQYRASSSTTAYIPP--HTGGRGSDGAGYQNAKLEPSVQKANER-PL 87
             N Q+   + +  S  + SS +TAY+ P        +   G++ A LE S+ K+  +   
Sbjct: 865  INVQDENFTLF-GSPDQTSSCSTAYVKPLLCDNKAMTSNVGFREAMLESSIDKSMAKGSS 923

Query: 86   AMPSRALQLSNRERLLLRKQALKMKNIP 3
              P RA +LSNRERLLLRKQALK+K +P
Sbjct: 924  GTPFRARRLSNRERLLLRKQALKLKRLP 951


>gb|KZV55871.1| hypothetical protein F511_15721 [Dorcoceras hygrometricum]
          Length = 1034

 Score =  162 bits (410), Expect = 1e-41
 Identities = 109/261 (41%), Positives = 149/261 (57%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRP+TLLSKREA+KRSIEAQRR+SLKLHVL+L++NID+L+LKM      
Sbjct: 671  YRGKNYKRPASLRPRTLLSKREALKRSIEAQRRQSLKLHVLELTKNIDKLELKMV----- 725

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPADETRESHGTDATFKA 426
                          E E  E   N+ +   KD  ++ QS+L   A+E  E+  T  T   
Sbjct: 726  -------------TEPEFGEISVNEDKSFVKDHNSEDQSHLEYLAEEIMENRETGTTSGQ 772

Query: 425  DEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQ 246
             ++ + +SKGSV + +  +  D+   S +KGK   +  K + QP S+PK  +  LN + +
Sbjct: 773  GKEFVPSSKGSVGVGRLGLPRDI-LHSGIKGKDACDMPKEEPQPISVPKSPQDALNMSRR 831

Query: 245  NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAMPSRAL 66
             ++ S     Q   S++T+    PH     +DG+    A LE    K  +   A   R  
Sbjct: 832  RIDFSLSRNDQVNTSATTST--QPHFRDPKTDGS---KANLEYLAGKTTQNESAF-HRPT 885

Query: 65   QLSNRERLLLRKQALKMKNIP 3
            QLSNRERL+LRKQAL+MKN P
Sbjct: 886  QLSNRERLILRKQALRMKNRP 906


>gb|PHT91786.1| hypothetical protein T459_06899 [Capsicum annuum]
          Length = 1038

 Score =  141 bits (356), Expect = 2e-34
 Identities = 98/271 (36%), Positives = 138/271 (50%), Gaps = 10/271 (3%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ LK ++AK+++ 
Sbjct: 656  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALKSRLAKNEEM 715

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDP-ADETRESHGTDATFK 429
              +Q            +IV+ +     +S      + Q  L  P   E  E    D    
Sbjct: 716  IHIQ----------SPDIVDKQVPVTGLSDAAGGTNYQPSLASPCTSEDSEDVAEDTDPN 765

Query: 428  ADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNE 249
               +   +S  +   SQ+ I  D S Q   K   +++TT+   Q  S  KE++   N N 
Sbjct: 766  CPNELPSDSSDTDHSSQQDIPSDSSFQYESKAAAMYDTTQPQHQSISSTKESKSMFNVNV 825

Query: 248  Q----NVELSHYPRSQYRAS-----SSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANE 96
                    +  +  + ++       S T ++  P       + +   + K +  ++    
Sbjct: 826  DKKVFGSAVGEFVSTSFKEEVKIHFSETKSFSKPQEVDNKKEVSQVDSVKPQQELRSTRS 885

Query: 95   RPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            R   M  + +QLSNRERLLLRKQALKMK  P
Sbjct: 886  RSEGMSPKKIQLSNRERLLLRKQALKMKKQP 916


>gb|PHU27593.1| hypothetical protein BC332_05925 [Capsicum chinense]
          Length = 1038

 Score =  140 bits (353), Expect = 5e-34
 Identities = 98/271 (36%), Positives = 138/271 (50%), Gaps = 10/271 (3%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ LK ++AK+++ 
Sbjct: 656  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALKSRLAKNEEM 715

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDP-ADETRESHGTDATFK 429
              +Q            +IV+ +     +S      + Q  L  P   E  E    D    
Sbjct: 716  IHIQ----------SPDIVDKQVPVTGLSDAAGGTNYQPSLASPCTSEDSEDVAEDTDPN 765

Query: 428  ADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNE 249
               +   +S  +   SQ+ I  D S Q   K   +++TT+   Q  S  KE++   N N 
Sbjct: 766  CPNELPSDSSDTDHSSQQDIPSDSSFQYESKAAAMYDTTQPQHQSISSTKESKSRFNVNV 825

Query: 248  Q----NVELSHYPRSQYRAS-----SSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANE 96
                    +  +  + ++       S T ++  P       + +   + K +  ++    
Sbjct: 826  DKKVFGSAVGEFVSTSFKEEVKIHFSETKSFSKPQEVDNKKEVSQVDSVKPQQELRSTRS 885

Query: 95   RPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            R   M  + +QLSNRERLLLRKQALKMK  P
Sbjct: 886  RSEGMSPKKIQLSNRERLLLRKQALKMKKQP 916


>ref|XP_016561487.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X2 [Capsicum annuum]
          Length = 1038

 Score =  140 bits (352), Expect = 7e-34
 Identities = 97/271 (35%), Positives = 138/271 (50%), Gaps = 10/271 (3%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ LK ++AK+++ 
Sbjct: 656  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALKSRLAKNEEM 715

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDP-ADETRESHGTDATFK 429
              +Q            +IV+ +     +S      + Q  L  P   E  E    D    
Sbjct: 716  IHIQ----------SPDIVDKQVPVTGLSDAARGTNYQPSLASPCTSEDSEDVAEDTDPN 765

Query: 428  ADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNE 249
               +   +S  +   S++ I  D S Q   K   +++TT+   Q  S  KE++   N N 
Sbjct: 766  CPNELPSDSSDTDHSSRQDIPSDSSFQYESKAAAMYDTTQPQHQSISSTKESKSMFNVNV 825

Query: 248  Q----NVELSHYPRSQYRAS-----SSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANE 96
                    +  +  + ++       S T ++  P       + +   + K +  ++    
Sbjct: 826  DKKVFGSAVGEFVSTSFKEEVKIHFSETKSFSKPQEVDNKKEVSQVDSVKPQQELRSTRS 885

Query: 95   RPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            R   M  + +QLSNRERLLLRKQALKMK  P
Sbjct: 886  RSEGMSPKKIQLSNRERLLLRKQALKMKKQP 916


>gb|PHT57248.1| hypothetical protein CQW23_05734 [Capsicum baccatum]
          Length = 1038

 Score =  137 bits (345), Expect = 6e-33
 Identities = 97/271 (35%), Positives = 137/271 (50%), Gaps = 10/271 (3%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ LK ++AK+++ 
Sbjct: 656  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALKSRLAKNEEM 715

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDP-ADETRESHGTDATFK 429
              +Q            +IV+ +     +S      + Q  L  P   E  E    D    
Sbjct: 716  IHIQ----------SPDIVDKQVPVTGLSDAAGGTNYQPSLASPCTSEDSEDVAEDTDPN 765

Query: 428  ADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNE 249
               +   +S  +   SQ+ I  D S Q   K   +++TT+   Q  S  KE++   N N 
Sbjct: 766  CPNELPSDSSDTDHSSQQDIPSDSSFQYESKAAAMYDTTQPQHQSISSTKESKSMFNVNV 825

Query: 248  Q----NVELSHYPRSQYRAS-----SSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANE 96
                    +  +  + ++       S T ++          + +   + K +  ++    
Sbjct: 826  DKKVFGSAVGEFVSTSFKEEVKIHFSETKSFSKSQEVDNKKEVSQVDSVKPQQELRSTRS 885

Query: 95   RPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            R   M  + +QLSNRERLLLRKQALKMK  P
Sbjct: 886  RFEGMSPKKIQLSNRERLLLRKQALKMKKQP 916


>ref|XP_016561486.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X1 [Capsicum annuum]
          Length = 1045

 Score =  137 bits (344), Expect = 8e-33
 Identities = 100/278 (35%), Positives = 143/278 (51%), Gaps = 17/278 (6%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ LK ++AK+++ 
Sbjct: 656  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALKSRLAKNEEM 715

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDP-ADETRESHGTDATFK 429
              +Q            +IV+ +     +S      + Q  L  P   E + +   D+   
Sbjct: 716  IHIQ----------SPDIVDKQVPVTGLSDAARGTNYQPSLASPCTSEVKMNAFVDSEDV 765

Query: 428  A-DEDP------MHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETR 270
            A D DP        +S  +   S++ I  D S Q   K   +++TT+   Q  S  KE++
Sbjct: 766  AEDTDPNCPNELPSDSSDTDHSSRQDIPSDSSFQYESKAAAMYDTTQPQHQSISSTKESK 825

Query: 269  GFLNTNEQ----NVELSHYPRSQYRAS-----SSTTAYIPPHTGGRGSDGAGYQNAKLEP 117
               N N         +  +  + ++       S T ++  P       + +   + K + 
Sbjct: 826  SMFNVNVDKKVFGSAVGEFVSTSFKEEVKIHFSETKSFSKPQEVDNKKEVSQVDSVKPQQ 885

Query: 116  SVQKANERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
             ++    R   M  + +QLSNRERLLLRKQALKMK  P
Sbjct: 886  ELRSTRSRSEGMSPKKIQLSNRERLLLRKQALKMKKQP 923


>ref|XP_015066170.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Solanum pennellii]
          Length = 1048

 Score =  137 bits (344), Expect = 8e-33
 Identities = 102/275 (37%), Positives = 140/275 (50%), Gaps = 14/275 (5%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ L+ ++AK+++ 
Sbjct: 669  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEI 728

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPADETRESHGTDATFKA 426
            S +Q            +IV+ +     IS    E + QS L  P +++ ++         
Sbjct: 729  SHIQ----------SPDIVDRQVPVTGISDAAGETNYQSSLASPTEDSGDA-------AE 771

Query: 425  DEDPMHNSKGSVDI------SQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGF 264
            D DP    + S D       SQ+    D   Q   K + + +T +   Q  S  KE++  
Sbjct: 772  DTDPSSQKELSSDFSDTDHNSQQEFPIDPFFQYEGKVEAMGDTIQPQHQSISSIKESKSM 831

Query: 263  LNTNEQ--------NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQ 108
             N N          +  +S   R + +   S T                    K + +++
Sbjct: 832  FNVNVDQETFSSVVSESVSKSSRGEVKIHFSETRSFNRTREVDNKMEVSQPPVKPQQALR 891

Query: 107  KANERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
                R   MP+R +QLSNRERLLLRKQALKMK  P
Sbjct: 892  STRGRSEGMPTRRVQLSNRERLLLRKQALKMKKQP 926


>ref|XP_011047274.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Populus euphratica]
          Length = 1026

 Score =  136 bits (343), Expect = 1e-32
 Identities = 107/266 (40%), Positives = 137/266 (51%), Gaps = 5/266 (1%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNYTRPA LRP TLLSKR+AMKRS+EAQRRESLKLHVL+L+ NID LKL++ KDK+ 
Sbjct: 665  YRGKNYTRPACLRPPTLLSKRQAMKRSLEAQRRESLKLHVLRLTSNIDHLKLQLVKDKEA 724

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPAD-----ETRESHGTD 441
             ++Q     +   V+ E  E    D E+     + D  SY   PAD     ETR+ HG D
Sbjct: 725  YNVQCFDESKFQ-VKGESEEPARTDSEL-----KPDCHSYSTIPADCNVIIETRDEHGAD 778

Query: 440  ATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFL 261
            +T     D +  S     +                G    N T  + +P SLP+      
Sbjct: 779  STTVNQNDSLGASANHKQLQPAQRSNWTDRYPTFDG----NRT-GENEPNSLPE------ 827

Query: 260  NTNEQNVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANERPLAM 81
             +NE+NV  SH       + +           G     A  Q+ +  P V + + R    
Sbjct: 828  FSNEKNV--SHLNAKNCVSFNEEM--------GSSVKSAENQSGESVPIVVEEDNR---K 874

Query: 80   PSRALQLSNRERLLLRKQALKMKNIP 3
            PS  + LSNR+RLLLRKQALKMKN P
Sbjct: 875  PSSVVCLSNRDRLLLRKQALKMKNRP 900


>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Solanum tuberosum]
          Length = 1049

 Score =  136 bits (343), Expect = 1e-32
 Identities = 99/270 (36%), Positives = 146/270 (54%), Gaps = 9/270 (3%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ L+ ++AK+++ 
Sbjct: 669  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEM 728

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPADETRESHGTDATFKA 426
              +Q            +IV+ +     IS      + QS    P +++ ++   D    +
Sbjct: 729  VHIQ----------SPDIVDRQVPVTGISDAAGGTNYQSSSASPTEDSGDA-AEDTDPSS 777

Query: 425  DEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTN-E 249
             ++   +S  +   SQ+    D   Q   K + + +T + + Q  S  KE++   N N +
Sbjct: 778  QKELSSDSSDTDHNSQQEFPIDPFFQYEGKVEAVGDTIQPEHQSISSIKESKSMFNVNVD 837

Query: 248  QNVELSHYPRSQYRAS--------SSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANER 93
            Q    S    S  ++S        S T ++  P       + +   + K + +++    R
Sbjct: 838  QKTFGSAVSESVSKSSRGEVKIHFSETRSFNKPREVDDKKEVSQLPSVKPQQALRSTRSR 897

Query: 92   PLAMPSRALQLSNRERLLLRKQALKMKNIP 3
               MP+R +QLSNRERLLLRKQALKMK  P
Sbjct: 898  SEGMPTRKVQLSNRERLLLRKQALKMKKQP 927


>gb|POF15812.1| crm-domain containing factor cfm2, chloroplastic [Quercus suber]
          Length = 853

 Score =  135 bits (339), Expect = 3e-32
 Identities = 101/277 (36%), Positives = 146/277 (52%), Gaps = 16/277 (5%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNYTRPASLRPQTLL+KREA+KRSIEAQRR+SLKLHVL L++NID+LKL++ KDK+ 
Sbjct: 453  YRGKNYTRPASLRPQTLLNKREALKRSIEAQRRKSLKLHVLSLTKNIDDLKLQLDKDKEA 512

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPAD------ETRESHGT 444
            +++    AL +  V++++   +  +   SQ +  +   S+   PA       E  + HG 
Sbjct: 513  NNVLPADALNYKLVKEDMNNMQATECLRSQVEHNSSPLSHSVIPACHEENNLEAEDKHGA 572

Query: 443  DATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRS-LPKETRG 267
              T     D M  S  +   +Q+     +SS       + F++     +P + L K+  G
Sbjct: 573  QLTLTNLNDGMDASIYNTQATQQDKVLGLSS------TFRFSSELVSKEPHAKLCKDMNG 626

Query: 266  FLNTNEQNVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPS--------- 114
                 E    +S      + +  + ++ +  H          Y N  +EP+         
Sbjct: 627  -----EVETAVSTPCPDNFMSEETGSSAVVQH--------CVYDNNAIEPAKSAKIDLKP 673

Query: 113  VQKANERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            V  A E    MP RA+ LSN++RLLLRKQALKMK  P
Sbjct: 674  VPIAVENGSEMPHRAVLLSNKDRLLLRKQALKMKTRP 710


>ref|XP_023908424.1| CRM-domain containing factor CFM2, chloroplastic isoform X4 [Quercus
            suber]
          Length = 1037

 Score =  135 bits (339), Expect = 4e-32
 Identities = 101/277 (36%), Positives = 146/277 (52%), Gaps = 16/277 (5%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNYTRPASLRPQTLL+KREA+KRSIEAQRR+SLKLHVL L++NID+LKL++ KDK+ 
Sbjct: 669  YRGKNYTRPASLRPQTLLNKREALKRSIEAQRRKSLKLHVLSLTKNIDDLKLQLDKDKEA 728

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPAD------ETRESHGT 444
            +++    AL +  V++++   +  +   SQ +  +   S+   PA       E  + HG 
Sbjct: 729  NNVLPADALNYKLVKEDMNNMQATECLRSQVEHNSSPLSHSVIPACHEENNLEAEDKHGA 788

Query: 443  DATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRS-LPKETRG 267
              T     D M  S  +   +Q+     +SS       + F++     +P + L K+  G
Sbjct: 789  QLTLTNLNDGMDASIYNTQATQQDKVLGLSS------TFRFSSELVSKEPHAKLCKDMNG 842

Query: 266  FLNTNEQNVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPS--------- 114
                 E    +S      + +  + ++ +  H          Y N  +EP+         
Sbjct: 843  -----EVETAVSTPCPDNFMSEETGSSAVVQH--------CVYDNNAIEPAKSAKIDLKP 889

Query: 113  VQKANERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            V  A E    MP RA+ LSN++RLLLRKQALKMK  P
Sbjct: 890  VPIAVENGSEMPHRAVLLSNKDRLLLRKQALKMKTRP 926


>ref|XP_023908420.1| CRM-domain containing factor CFM2, chloroplastic isoform X1 [Quercus
            suber]
 ref|XP_023908421.1| CRM-domain containing factor CFM2, chloroplastic isoform X1 [Quercus
            suber]
          Length = 1046

 Score =  135 bits (339), Expect = 4e-32
 Identities = 101/277 (36%), Positives = 146/277 (52%), Gaps = 16/277 (5%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNYTRPASLRPQTLL+KREA+KRSIEAQRR+SLKLHVL L++NID+LKL++ KDK+ 
Sbjct: 669  YRGKNYTRPASLRPQTLLNKREALKRSIEAQRRKSLKLHVLSLTKNIDDLKLQLDKDKEA 728

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPAD------ETRESHGT 444
            +++    AL +  V++++   +  +   SQ +  +   S+   PA       E  + HG 
Sbjct: 729  NNVLPADALNYKLVKEDMNNMQATECLRSQVEHNSSPLSHSVIPACHEENNLEAEDKHGA 788

Query: 443  DATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRS-LPKETRG 267
              T     D M  S  +   +Q+     +SS       + F++     +P + L K+  G
Sbjct: 789  QLTLTNLNDGMDASIYNTQATQQDKVLGLSS------TFRFSSELVSKEPHAKLCKDMNG 842

Query: 266  FLNTNEQNVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPS--------- 114
                 E    +S      + +  + ++ +  H          Y N  +EP+         
Sbjct: 843  -----EVETAVSTPCPDNFMSEETGSSAVVQH--------CVYDNNAIEPAKSAKIDLKP 889

Query: 113  VQKANERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            V  A E    MP RA+ LSN++RLLLRKQALKMK  P
Sbjct: 890  VPIAVENGSEMPHRAVLLSNKDRLLLRKQALKMKTRP 926


>ref|XP_023908422.1| CRM-domain containing factor CFM2, chloroplastic isoform X2 [Quercus
            suber]
          Length = 1046

 Score =  135 bits (339), Expect = 4e-32
 Identities = 101/277 (36%), Positives = 146/277 (52%), Gaps = 16/277 (5%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNYTRPASLRPQTLL+KREA+KRSIEAQRR+SLKLHVL L++NID+LKL++ KDK+ 
Sbjct: 669  YRGKNYTRPASLRPQTLLNKREALKRSIEAQRRKSLKLHVLSLTKNIDDLKLQLDKDKEA 728

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPAD------ETRESHGT 444
            +++    AL +  V++++   +  +   SQ +  +   S+   PA       E  + HG 
Sbjct: 729  NNVLPADALNYKLVKEDMNNMQATECLRSQVEHNSSPLSHSVIPACHEENNLEAEDKHGA 788

Query: 443  DATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRS-LPKETRG 267
              T     D M  S  +   +Q+     +SS       + F++     +P + L K+  G
Sbjct: 789  QLTLTNLNDGMDASIYNTQATQQDKVLGLSS------TFRFSSELVSKEPHAKLCKDMNG 842

Query: 266  FLNTNEQNVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPS--------- 114
                 E    +S      + +  + ++ +  H          Y N  +EP+         
Sbjct: 843  -----EVETAVSTPCPDNFMSEETGSSAVVQH--------CVYDNNAIEPAKSAKIDLKP 889

Query: 113  VQKANERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
            V  A E    MP RA+ LSN++RLLLRKQALKMK  P
Sbjct: 890  VPIAVENGSEMPHRAVLLSNKDRLLLRKQALKMKTRP 926


>ref|XP_004232267.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Solanum
            lycopersicum]
          Length = 1049

 Score =  134 bits (336), Expect = 9e-32
 Identities = 101/279 (36%), Positives = 140/279 (50%), Gaps = 18/279 (6%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ L+ ++AK+++ 
Sbjct: 669  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEI 728

Query: 605  SDMQLTKALEH------------GFVEQEIVENRYNDGEISQKDPENDRQSYLGDPADET 462
            S +Q    ++             G   Q IV +   D   + +D +   Q  L +   +T
Sbjct: 729  SHIQSPDIVDRQVPVMGISDAAGGTNYQSIVASPIEDSGDAAEDTDPSSQKELSNDFSDT 788

Query: 461  RESHGTDATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVK-GKYLFNT-----TKADL 300
               H +   F    +P    +G V+     I+    S S +K  K +FN      T    
Sbjct: 789  --DHDSQQEFPI--NPFFQYEGKVEAMGDTIQPQHQSISSIKESKSMFNVNVDQETFGSA 844

Query: 299  QPRSLPKETRGFLNTNEQNVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLE 120
               S+ K +RG +  +       + PR     ++      PP               K +
Sbjct: 845  VSESVSKSSRGEVKIHFSETRSFNKPR---EVNNKMEVSQPP-------------PVKPQ 888

Query: 119  PSVQKANERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
             +++    R   M +R +QLSNRERLLLRKQALKMK  P
Sbjct: 889  QTLRSTRSRSEGMSTRRVQLSNRERLLLRKQALKMKKQP 927


>ref|XP_015162642.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Solanum tuberosum]
          Length = 1063

 Score =  131 bits (330), Expect = 6e-31
 Identities = 102/281 (36%), Positives = 144/281 (51%), Gaps = 20/281 (7%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRPQTLLSKREAMKRSIEAQRR+SLKLHVLKL++NI+ L+ ++AK+++ 
Sbjct: 669  YRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEM 728

Query: 605  SDMQLTKALEHGFVEQEIVE----NRYNDGEISQKDPENDRQSYL-------GDPADETR 459
              +Q    ++       I +      Y     S  +     +S         GD A++T 
Sbjct: 729  VHIQSPDIVDRQVPVTGISDAAGGTNYQSSSASPTECVLIERSLFSFYIQDSGDAAEDTD 788

Query: 458  ESHGTDATFKADEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPK 279
             S   + +     D  HNS+    I       D   Q   K + + +T + + Q  S  K
Sbjct: 789  PSSQKELS-SDSSDTDHNSQQEFPI-------DPFFQYEGKVEAVGDTIQPEHQSISSIK 840

Query: 278  ETRGFLNTN-EQNVELSHYPRSQYRAS--------SSTTAYIPPHTGGRGSDGAGYQNAK 126
            E++   N N +Q    S    S  ++S        S T ++  P       + +   + K
Sbjct: 841  ESKSMFNVNVDQKTFGSAVSESVSKSSRGEVKIHFSETRSFNKPREVDDKKEVSQLPSVK 900

Query: 125  LEPSVQKANERPLAMPSRALQLSNRERLLLRKQALKMKNIP 3
             + +++    R   MP+R +QLSNRERLLLRKQALKMK  P
Sbjct: 901  PQQALRSTRSRSEGMPTRKVQLSNRERLLLRKQALKMKKQP 941


>ref|XP_010687964.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Beta
            vulgaris subsp. vulgaris]
 ref|XP_010687967.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Beta
            vulgaris subsp. vulgaris]
 ref|XP_010687970.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Beta
            vulgaris subsp. vulgaris]
 ref|XP_019106958.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Beta
            vulgaris subsp. vulgaris]
 ref|XP_019106959.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Beta
            vulgaris subsp. vulgaris]
 ref|XP_019106960.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Beta
            vulgaris subsp. vulgaris]
 ref|XP_019106961.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Beta
            vulgaris subsp. vulgaris]
 gb|KMT02848.1| hypothetical protein BVRB_8g194280 [Beta vulgaris subsp. vulgaris]
          Length = 1035

 Score =  131 bits (329), Expect = 8e-31
 Identities = 102/274 (37%), Positives = 144/274 (52%), Gaps = 13/274 (4%)
 Frame = -1

Query: 785  YRGKNYTRPASLRPQTLLSKREAMKRSIEAQRRESLKLHVLKLSRNIDELKLKMAKDKDT 606
            YRGKNY RPASLRP+TLL+K+EAMKRSIEAQRR+SLKL+VLKL+RNIDE+KLK+ +DK+ 
Sbjct: 677  YRGKNYQRPASLRPETLLNKKEAMKRSIEAQRRKSLKLNVLKLARNIDEMKLKLVEDKE- 735

Query: 605  SDMQLTKALEHGFVEQEIVENRYNDGEISQKDPENDRQSYLGDPADETRESHGTDATFKA 426
                   AL++   EQE+ EN   +     KD + D  S  G       E H     F +
Sbjct: 736  -------ALDNKAGEQELEENVNLNISNRHKDSQEDIPSIKG-------EKH---VNFPS 778

Query: 425  DEDPMHNSKGSVDISQRPIRGDVSSQSVVKGKYLFNTTKADLQPRSLPKETRGFLNTNEQ 246
              D MH +     IS   +   ++S +V+K +   + +  D    +   E     + +  
Sbjct: 779  SSDEMHEAADK--ISAGSVCQKINSNAVMKEQTSADVSLYDGDTEASCSEKIDVASNDPG 836

Query: 245  NVELSHYPRSQYRASSSTTAYIPPHTGGRGSDGAGYQNAKLEPSVQKANER--PL----- 87
            N  + H   ++Y +  +  +          S+    ++ K EPS +  N+   PL     
Sbjct: 837  NAVMFH--STKYESEPNIMS-----LSENDSEHRIVKDGKSEPSQESDNKAVVPLSFRKA 889

Query: 86   ------AMPSRALQLSNRERLLLRKQALKMKNIP 3
                  A+ +RA  L+NRERLLLRKQAL MK  P
Sbjct: 890  AASSSDAVQARAKPLTNRERLLLRKQALTMKRRP 923