BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00027661
         (704 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   225   4e-64
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    219   5e-62
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...   205   5e-57
gb|PHT40220.1| Retrovirus-related Pol polyprotein from transposo...   196   2e-56
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           192   2e-52
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   191   3e-52
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...   187   1e-50
gb|KYP53808.1| Retrovirus-related Pol polyprotein from transposo...   179   2e-50
gb|KYP49408.1| Retrovirus-related Pol polyprotein from transposo...   177   9e-50
gb|PKI48613.1| hypothetical protein CRG98_031032 [Punica granatum]    177   1e-49
gb|KYP53895.1| Retrovirus-related Pol polyprotein from transposo...   177   1e-48
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...   181   1e-48
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...   181   1e-48
gb|KMT10093.1| hypothetical protein BVRB_5g118560 [Beta vulgaris...   181   2e-48
gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]      179   6e-48
gb|KYP31799.1| Retrovirus-related Pol polyprotein from transposo...   166   1e-46
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   175   1e-46
gb|KYP42945.1| Retrovirus-related Pol polyprotein from transposo...   169   6e-46
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]   173   9e-46
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]   170   4e-45

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score =  225 bits (574), Expect = 4e-64
 Identities = 112/236 (47%), Positives = 155/236 (65%), Gaps = 9/236 (3%)
 Frame = -3

Query: 687 QALAVESRGRH---------KGNDRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDE 535
           QAL  E RGR          +   R K K RSKSR  R CY CN+PGH  +DC   ++ +
Sbjct: 194 QALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSR-VRNCYNCNQPGHFKRDCPNPRKGK 252

Query: 534 GDQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHAT 355
           G+   + QK     N+++T+A V  + +VV+  +E+  C+H++  +++WV+D+AAS HAT
Sbjct: 253 GET--SGQK-----NDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHAT 305

Query: 354 PNKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLIS 175
           P ++ F  Y  GDFGTVK GN + + I G+GD+CI+TN G TL LKDVRHVPDLR+NLIS
Sbjct: 306 PVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLIS 365

Query: 174 GVELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESS 7
           G+ LDR GY S F N++W+LTK SLV+A+G   G LY+T  ++C   L  A+DE S
Sbjct: 366 GIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEIS 421


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  219 bits (559), Expect = 5e-62
 Identities = 106/238 (44%), Positives = 157/238 (65%), Gaps = 9/238 (3%)
 Frame = -3

Query: 687 QALAVESRGRH---------KGNDRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDE 535
           Q    ESRGR          +   R K K RSKS+  R CY C++PGH  +DC   K+ +
Sbjct: 195 QVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSK-ARNCYNCDQPGHFKRDCPNPKRGK 253

Query: 534 GDQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHAT 355
           G+   + QK     N+++T+A V  + DVV+L +E+  C+H+A ++++WV+D+AAS+HAT
Sbjct: 254 GES--SGQK-----NDDNTAAMVQNNDDVVLLINEEEECMHLAGTESEWVVDTAASYHAT 306

Query: 354 PNKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLIS 175
           P ++ F  Y  GD+G VK GN + + I G+GD+C +TN G TL LKDVRHVPDLR+NLIS
Sbjct: 307 PVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCTLVLKDVRHVPDLRMNLIS 366

Query: 174 GVELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESSSN 1
           G+ LD+ GY + F N++W+LTK +LV+A+G   G LY+T  ++C   L  A +E+S++
Sbjct: 367 GIALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNAEICQGELNAAHEENSAD 424


>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1321

 Score =  205 bits (522), Expect = 5e-57
 Identities = 102/230 (44%), Positives = 140/230 (60%)
 Frame = -3

Query: 690 SQALAVESRGRHKGNDRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQ 511
           + AL  E R R K       +  SKSR+ R CY C KPGH+ K+C   K++  D+ + N 
Sbjct: 195 THALVTERRSRSKSRTPRGHRDHSKSRERRSCYNCGKPGHLKKNCRFLKKEIQDKNQAND 254

Query: 510 KKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPNKEFFST 331
           +        +T+AT     D + L   +  C H+A  D +W+IDSAAS+H  P +E+F+T
Sbjct: 255 R--------NTAATTSASDDEITLLCNQGECCHIAEPDEEWIIDSAASYHCVPKREYFTT 306

Query: 330 YKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGVELDRQG 151
           Y+ GDFG V  GN + + IVG+GD+ ++T  G TL LKDVRH+PD+RLNLIS   LD++G
Sbjct: 307 YRKGDFGHVNMGNKSTSQIVGIGDIHLQTGVGCTLILKDVRHIPDIRLNLISVNVLDKEG 366

Query: 150 YVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESSSN 1
           Y       RWKLTK SLVVA+G +   LYKT VKVC   L   ++++S N
Sbjct: 367 YEHSMKGGRWKLTKGSLVVAKGKLCCTLYKTYVKVCKGQLNAVENDASPN 416


>gb|PHT40220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Capsicum baccatum]
          Length = 512

 Score =  196 bits (499), Expect = 2e-56
 Identities = 99/237 (41%), Positives = 150/237 (63%), Gaps = 8/237 (3%)
 Frame = -3

Query: 687 QALAVESRG-----RHKGNDRDKGKGRSKSRDP---RKCYYCNKPGHVIKDCYKRKQDEG 532
           Q L  ESRG          DR +G+G+SK R     R CY CN+PGH  +DC  RK+ +G
Sbjct: 104 QTLITESRGISHQRSSNSYDRMEGRGKSKVRSKSKARNCYNCNQPGHFKRDCPTRKRGKG 163

Query: 531 DQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATP 352
           +   + QK     N+++T+ATV  + DVV+  +E+  C+H+A ++ +WV+D+  S+HATP
Sbjct: 164 ES--SGQK-----NDDNTAATVQNNDDVVLFINEEEECMHLAGTELEWVVDTGESYHATP 216

Query: 351 NKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISG 172
            ++FF  Y   DFGT+K GN++ + I+G+ D+CI+T     L L DVRHVP+L+LNLISG
Sbjct: 217 VRDFFCKYVADDFGTMKMGNSSYSKIMGIEDICIKTIVECILVLLDVRHVPELQLNLISG 276

Query: 171 VELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESSSN 1
           + LDR GY + F N++W+LTK  L +A+    G LY+T  ++    L   ++E S++
Sbjct: 277 IALDRDGYENYFVNKKWRLTKGELAIAKDVGRGTLYRTNAEIYLGELNVVREEISAD 333


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  192 bits (488), Expect = 2e-52
 Identities = 99/234 (42%), Positives = 144/234 (61%), Gaps = 3/234 (1%)
 Frame = -3

Query: 699 AESSQALAVESRGRHKG---NDRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGD 529
           +  S+ LAV +RGR +    ++RDK +G+S      +C+YC K GH+ + C   +Q + D
Sbjct: 193 SSQSEVLAVTTRGRSQNKSQSNRDKSRGKSNKFANVECHYCKKKGHIKRFC---RQFQND 249

Query: 528 QKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPN 349
           QKK   KKV  +   D     F + +VV       + +++ + +  WVIDS A+ HATP 
Sbjct: 250 QKKNKGKKVKPEESSDDETNSFGEFNVVY----DDDIINLTTQEMTWVIDSGATIHATPR 305

Query: 348 KEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGV 169
           +E FS+Y +GDFG VK GN N +++VG GDVC+ T  G  L L+DVRHVPD+RLNLIS  
Sbjct: 306 RELFSSYTLGDFGRVKMGNANFSTVVGKGDVCLETMNGMKLLLRDVRHVPDMRLNLISVD 365

Query: 168 ELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESS 7
           +LD +GY + F N +WKLTK SL+VARG     LY T+  +    +  A+++S+
Sbjct: 366 KLDEEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVTQASISQQVINVAENDSN 419


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1314

 Score =  191 bits (486), Expect = 3e-52
 Identities = 102/235 (43%), Positives = 144/235 (61%), Gaps = 9/235 (3%)
 Frame = -3

Query: 687 QALAVESRGRHKGND---RDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDEG----- 532
           +A  +++RGR K  +   R K +GRSKSR    CYYC KPGH   +C   K+D+      
Sbjct: 189 EANVIDNRGRSKNREKGGRGKSQGRSKSRTRICCYYCGKPGHRKSECRFLKKDQQAGTVH 248

Query: 531 -DQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHAT 355
            DQ    +KK      ED + T     DV ++  E  N L++A  +  W+IDS ASFH T
Sbjct: 249 PDQIDPRKKK------EDGTTTAVTSDDVFLVGEE--NYLNIAFDECIWIIDSGASFHVT 300

Query: 354 PNKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLIS 175
           P++EFFS+Y+ GDFG VK GN+  + IVG+G++ + T  G  L LK+VRHVPD+RLNLIS
Sbjct: 301 PHEEFFSSYQKGDFGMVKMGNHVTSKIVGIGEIALMTENGNKLMLKEVRHVPDMRLNLIS 360

Query: 174 GVELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDES 10
             +LD  G ++ F  +RWKL++ S++VARG   G+LY  + K+C   +  A+D S
Sbjct: 361 VSKLDEAGMINQFSADRWKLSRGSMIVARGKKEGSLYTMQGKICKGDMNVAQDAS 415


>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score =  187 bits (475), Expect = 1e-50
 Identities = 103/237 (43%), Positives = 141/237 (59%), Gaps = 5/237 (2%)
 Frame = -3

Query: 699 AESSQALAVESRGRHKGNDRDKGKGRSKSRDPR----KCYYCNKPGHVIKDCYKRKQDEG 532
           +++SQ    E RGR K     KG GRS SR       KC++C   GH+ K+C K K+D  
Sbjct: 192 SDNSQVFVTEHRGRSKSRG-PKGHGRSMSRSRTRFNGKCHHCGIFGHMKKNCNKLKKDPK 250

Query: 531 DQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMAS-SDADWVIDSAASFHAT 355
           + +  N  + + D     ++    + + + L  E   CLH+   S   WV+DS ASFHAT
Sbjct: 251 EGRDGNTHQPNDDTRNTAASVSHDECEFLCLEGE---CLHVDDCSSVAWVVDSGASFHAT 307

Query: 354 PNKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLIS 175
           P+ E+F+TY+ GDFG VK GN+  + I G+GD+C  T+ G  L LKDVR+VP LRLNL+S
Sbjct: 308 PHLEYFTTYQGGDFGRVKMGNDGYSKISGIGDICFETDLGNKLMLKDVRYVPGLRLNLMS 367

Query: 174 GVELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESSS 4
              LDRQG+    G+++W+LTK SLV+ARG +   LYKT  K+C   L  A D S S
Sbjct: 368 TGVLDRQGFHHHGGDQKWRLTKGSLVIARGKMCCTLYKTYGKICKGELNVADDSSPS 424


>gb|KYP53808.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 464

 Score =  179 bits (455), Expect = 2e-50
 Identities = 90/233 (38%), Positives = 146/233 (62%), Gaps = 5/233 (2%)
 Frame = -3

Query: 690 SQALAVESRGRHKGNDRDKGKGRSKSRDPRK-----CYYCNKPGHVIKDCYKRKQDEGDQ 526
           S+ L  E+ GR +  ++  G+ +S+S+   +     C+YC+K GH+ K+C+  K++  D+
Sbjct: 95  SEVLVTENMGRSQKKEQKSGRDKSRSKSISRYKNVECHYCHKIGHIQKNCFLWKKESKDK 154

Query: 525 KKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPNK 346
           K  ++++  +D +  T+AT    GD+V L    ++ +++ S ++ W++DS A+ H T  K
Sbjct: 155 KGKHRERDHNDGDRVTTATC---GDLVCLRD--YDIVNLVSDESMWIVDSGATLHVTSRK 209

Query: 345 EFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGVE 166
           EFF++Y  GDFG +K GN+  + ++GVGDVC++TN G  L LK V+HVPD+R NLIS   
Sbjct: 210 EFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQLLLKGVKHVPDVRFNLISVQV 269

Query: 165 LDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESS 7
           LD  GY + FG+ +WKLTK +L+VA+G  +  LY T+  V    +     ESS
Sbjct: 270 LDDGGYDNHFGSGKWKLTKGNLIVAKGEKNSKLYWTKALVAKDSVNAMYMESS 322


>gb|KYP49408.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 414

 Score =  177 bits (448), Expect = 9e-50
 Identities = 94/233 (40%), Positives = 145/233 (62%), Gaps = 5/233 (2%)
 Frame = -3

Query: 690 SQALAVESRGRHKGNDRDKG--KGRSKSRDPRK---CYYCNKPGHVIKDCYKRKQDEGDQ 526
           S+ L +E+RGR +  ++  G  K RSKSR   K   C+YC+K GH+ K+ +  K++  D+
Sbjct: 95  SEVLVIENRGRSQRKEQKSGRDKSRSKSRSRYKNVECHYCHKIGHIQKNYFLWKKESKDK 154

Query: 525 KKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPNK 346
           K   +++  +D +  T+AT     D+V L    ++ +++ S ++ W+IDS A+ H T  K
Sbjct: 155 KGKQRERDHNDGDHVTTATC---SDLVCLRD--YDIVNLVSDESMWIIDSGATLHVTSRK 209

Query: 345 EFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGVE 166
           EFF++Y  GDFG +K GN+  + ++GVGDVC++TN G  L L+ V+HVPD+R NLIS   
Sbjct: 210 EFFTSYTPGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQLLLRGVKHVPDVRFNLISMQV 269

Query: 165 LDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESS 7
           LD  GY + FG+ +WKLTK +L+VA+G  +  LY T+  V    +     ESS
Sbjct: 270 LDDGGYDNQFGSGKWKLTKGNLIVAKGEKNSKLYWTKALVAKDSVNAMYMESS 322


>gb|PKI48613.1| hypothetical protein CRG98_031032 [Punica granatum]
          Length = 435

 Score =  177 bits (448), Expect = 1e-49
 Identities = 96/237 (40%), Positives = 137/237 (57%), Gaps = 10/237 (4%)
 Frame = -3

Query: 690 SQALAVESRGRHK--------GNDRDKGKGRSKSRDPR--KCYYCNKPGHVIKDCYKRKQ 541
           S+AL  E RGR +        GN  DK +GRSKS+  +   CY+  K GH  ++C   K+
Sbjct: 80  SEALVTEQRGRSQSKNSSSKHGNSGDKSRGRSKSKTRKVVTCYHYGKEGHYKRECRALKK 139

Query: 540 DEGDQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFH 361
                   NQ       +E+ + TV  DG+  ++  E +  ++    D+ WV D+  SFH
Sbjct: 140 --------NQNGNGESKKEEGTTTVASDGETYIVCDEAY--VNFTCQDSTWVADTGVSFH 189

Query: 360 ATPNKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNL 181
            TP+++FFS+Y  GD+G V+ GN     IVG+GDVC+ T  G  L LK VRHVP++RLNL
Sbjct: 190 VTPHRDFFSSYTTGDYGYVRMGNGQSCKIVGIGDVCLETELGCKLLLKKVRHVPEIRLNL 249

Query: 180 ISGVELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDES 10
           IS  +L+ +GY + F N RWKL+K SL+VARG  +  LY+ R +  S  +  A+D S
Sbjct: 250 ISMGQLNDEGYSNEFSNGRWKLSKGSLIVARGQKTDTLYRLRARHNSGQVNVAEDYS 306


>gb|KYP53895.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 556

 Score =  177 bits (449), Expect = 1e-48
 Identities = 92/233 (39%), Positives = 145/233 (62%), Gaps = 5/233 (2%)
 Frame = -3

Query: 690 SQALAVESRGRHKGNDRDKG--KGRSKSRDPRK---CYYCNKPGHVIKDCYKRKQDEGDQ 526
           S+ L +E+RGR +  ++  G  K RSKSR   K   C+YC+K GH+ K+C+  K++  D+
Sbjct: 188 SEVLVIENRGRSQRKEQKSGRDKSRSKSRSRYKNVECHYCHKIGHIQKNCFLWKKESKDK 247

Query: 525 KKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPNK 346
           K   +++  +D +  T+AT    GD+V L    ++ +++ S ++ W++DS A+ H T  K
Sbjct: 248 KGKQRERDHNDGDRVTTATC---GDLVCLRD--YDIVNLVSDESMWIVDSGATLHVTSRK 302

Query: 345 EFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGVE 166
           E F++Y  GDFG +K GN+  + ++GVGD+C++TN    L L+ V+HVPD+R NLIS   
Sbjct: 303 ELFTSYTPGDFGVLKMGNDGVSKVIGVGDICLQTNMRMQLLLRGVKHVPDVRFNLISVQV 362

Query: 165 LDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESS 7
           LD  GY + FG+ +WKLTK +L+VA+G  +  LY T+  V    +     ESS
Sbjct: 363 LDDGGYDNHFGSGKWKLTKGNLIVAKGEKNSKLYWTKALVAKDSVNAMYMESS 415


>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  181 bits (460), Expect = 1e-48
 Identities = 93/220 (42%), Positives = 132/220 (60%)
 Frame = -3

Query: 672 ESRGRHKGNDRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSD 493
           E+RGR K  D+ + +GRSKSR    CYYC + GH   +C   K+D+  +           
Sbjct: 210 ETRGRSKSRDQYQSRGRSKSRSKITCYYCGRMGHRKMECRSFKRDQKAE----------- 258

Query: 492 NEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPNKEFFSTYKMGDF 313
                        D++ +  E  N L++A  D+ W++DS ASFH TP+  FFS+Y+ GDF
Sbjct: 259 -------------DMLYIIREG-NILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDF 304

Query: 312 GTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGVELDRQGYVSCFG 133
           GTV+ GN +++ IVG+GD+ + T+TG  L LKDVRHVP +RLNLIS  +LD  G ++ FG
Sbjct: 305 GTVQMGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAMRLNLISAGKLDDAGLMNYFG 364

Query: 132 NERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDE 13
             +WKLTK SLV+ARG   G+LY  + K+C   +    D+
Sbjct: 365 EGKWKLTKGSLVMARGKKEGSLYVMQAKLCKGEVNITTDD 404


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  181 bits (460), Expect = 1e-48
 Identities = 93/220 (42%), Positives = 132/220 (60%)
 Frame = -3

Query: 672 ESRGRHKGNDRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSD 493
           E+RGR K  D+ + +GRSKSR    CYYC + GH   +C   K+D+  +           
Sbjct: 210 ETRGRSKSRDQYQSRGRSKSRSKITCYYCGRMGHRKMECRSFKRDQKAE----------- 258

Query: 492 NEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPNKEFFSTYKMGDF 313
                        D++ +  E  N L++A  D+ W++DS ASFH TP+  FFS+Y+ GDF
Sbjct: 259 -------------DMLYIIREG-NILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDF 304

Query: 312 GTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGVELDRQGYVSCFG 133
           GTV+ GN +++ IVG+GD+ + T+TG  L LKDVRHVP +RLNLIS  +LD  G ++ FG
Sbjct: 305 GTVQMGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAMRLNLISAGKLDDAGLMNYFG 364

Query: 132 NERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDE 13
             +WKLTK SLV+ARG   G+LY  + K+C   +    D+
Sbjct: 365 EGKWKLTKGSLVMARGKKEGSLYVMQAKLCKGEVNITTDD 404


>gb|KMT10093.1| hypothetical protein BVRB_5g118560 [Beta vulgaris subsp. vulgaris]
          Length = 993

 Score =  181 bits (458), Expect = 2e-48
 Identities = 98/220 (44%), Positives = 140/220 (63%), Gaps = 7/220 (3%)
 Frame = -3

Query: 702  GAESS--QALAVESRGRHKG---NDRDKGKGRSKSRDPR-KCYYCNKPGHVIKDCYKRKQ 541
            G  SS  +A   E+RGR K    + RDK + +S+ R    KC+YC+K GH+ K CYK K+
Sbjct: 665  GVSSSPEEAYVAENRGRGKSRAPSGRDKSRSKSRGRYKNLKCHYCDKTGHIQKYCYKMKR 724

Query: 540  D-EGDQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASF 364
            D +G   K ++K+   D + D  A      D++++  E  + +++A+ +  WVIDS AS 
Sbjct: 725  DNKGGNGKQDKKQDQKDQDNDDRAAAATVEDLIIVHDE--SLVNLANYETSWVIDSGASL 782

Query: 363  HATPNKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLN 184
            H T  KEFF++Y  GD+  +K GN+  A +VGVGDVC+ T+ G  L LK+VRHVPD+RLN
Sbjct: 783  HVTSRKEFFTSYTPGDYEVLKMGNDGLAQVVGVGDVCLVTDIGAKLVLKNVRHVPDIRLN 842

Query: 183  LISGVELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLY 64
            LIS  +LD +G+ S F + +WKLTK SLV+ARG    +LY
Sbjct: 843  LISTGKLDDEGFCSTFYSGQWKLTKGSLVLARGKKHTSLY 882


>gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]
          Length = 1339

 Score =  179 bits (454), Expect = 6e-48
 Identities = 88/236 (37%), Positives = 138/236 (58%), Gaps = 7/236 (2%)
 Frame = -3

Query: 690 SQALAVESRGR-------HKGNDRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDEG 532
           S+ L  ESRGR       ++G  RDK +G S      +C++C + G + + C K K++  
Sbjct: 195 SEVLVTESRGRQQSRGPSNRGTSRDKSQGGSNRFSNIECHHCGEKGDIKRFCRKLKRENK 254

Query: 531 DQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATP 352
            +   N  K + +N ED +       D  ++       ++++  + DWV+DS AS HAT 
Sbjct: 255 KKGYNNNNKKEGNNNEDVAIV----DDFFIVCDNCVENINLSCDEMDWVVDSGASTHATS 310

Query: 351 NKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISG 172
            ++ FSTY+ GDFG V+ GNN +A+++G+GD+C+ T+   TL LK V+H+P+LR NL+S 
Sbjct: 311 RRDLFSTYETGDFGVVRMGNNGQANVIGIGDICVETSNETTLVLKGVKHIPELRFNLLSV 370

Query: 171 VELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESSS 4
            ELD +GY + F    WKL K S+VVA+G  + NLY  ++ V    + T  ++SSS
Sbjct: 371 GELDNEGYDNSFSENEWKLKKGSMVVAKGKKNSNLYVVQLGVSKCYINTCDNDSSS 426


>gb|KYP31799.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 294

 Score =  166 bits (419), Expect = 1e-46
 Identities = 87/198 (43%), Positives = 123/198 (62%)
 Frame = -3

Query: 600 KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHN 421
           +CYYCNK GH+ K+ +  K+ E   KK  QK+ D D++   + T    GD+V+LS   H 
Sbjct: 2   ECYYCNKLGHIQKNYFLWKK-ENKGKKGKQKEKDHDDDRVATTTC---GDLVILSD--HG 55

Query: 420 CLHMASSDADWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTN 241
            +++ S D  W+IDS A+ H TP KEFF++Y  GDFG +K GN++ + ++GVGDV ++TN
Sbjct: 56  LINLVSDDRMWIIDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDDVSKVIGVGDVFLQTN 115

Query: 240 TGYTLTLKDVRHVPDLRLNLISGVELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYK 61
            G  L L+ V+H PD+R NLI    LD  GY + FG+ +WKLTK +LVVARG  +  LY 
Sbjct: 116 MGMQLLLRVVKHAPDVRFNLIFVQMLDDGGYDNHFGSGKWKLTKGNLVVARGKKNSKLYW 175

Query: 60  TRVKVCSAGLTTAKDESS 7
           T+  V          E+S
Sbjct: 176 TKALVAKDSANAMYMEAS 193


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  175 bits (444), Expect = 1e-46
 Identities = 89/234 (38%), Positives = 142/234 (60%), Gaps = 3/234 (1%)
 Frame = -3

Query: 699 AESSQALAVESRGRHKGN---DRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGD 529
           +  S  L +   GR K     +RD+ K ++      +C+YC+  GH+ K C + K+D   
Sbjct: 170 SSQSNVLVIXKXGRSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDM-K 228

Query: 528 QKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPN 349
           Q K  +KK D+  E+D  AT   D  +V  S    + ++ A  ++ WVID  AS HATP 
Sbjct: 229 QGKVKEKKNDNGGEDDQVATTISDFLIVYDS----DVVNFACQESXWVIDXGASIHATPQ 284

Query: 348 KEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGV 169
           K+FF++Y  GDFG+V+ GN+  A  +G+GDV + T+ G  LTLK+V+H+PD+R+NLIS  
Sbjct: 285 KDFFTSYTSGDFGSVRMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTG 344

Query: 168 ELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESS 7
           +LD +G+ + F + +WKLT+ S+V+A+G  S +LY  + +V  + +    D+S+
Sbjct: 345 KLDDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDST 398


>gb|KYP42945.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 497

 Score =  169 bits (427), Expect = 6e-46
 Identities = 88/213 (41%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
 Frame = -3

Query: 639 DKGKGRSKSRDPR-KCYYCNKPGHVIKDCYK-RKQDEGDQKKTNQKKVDSDNEEDTSATV 466
           +K + +SKSR    +C+YC+K GH+ ++C+  +K+++G + K  +K  D D   D  AT 
Sbjct: 1   EKSRSKSKSRYKNVECHYCHKTGHIQRNCFLWKKENKGKKGKYKEKDHDGD---DRVATA 57

Query: 465 FPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNN 286
             D D+V+LS   H  +++ S ++ W++DS A+ H TP KEFF++Y  GDFG +K GN+ 
Sbjct: 58  TCD-DLVILSD--HGSVNLVSDESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDG 114

Query: 285 KASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGVELDRQGYVSCFGNERWKLTKR 106
            + ++GVGDVC++TN G  L L+ V+H PD+R NLIS   LD  GY + FG+ +WKLTK 
Sbjct: 115 VSKVIGVGDVCLQTNMGMQLLLRGVKHAPDVRFNLISLQILDDGGYDNHFGSGKWKLTKG 174

Query: 105 SLVVARGAISGNLYKTRVKVCSAGLTTAKDESS 7
           +LV+A G  +  LY T+  V    +     E+S
Sbjct: 175 NLVMAGGEKNSKLYWTKALVAKDSVNAMDMEAS 207


>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
          Length = 1302

 Score =  173 bits (438), Expect = 9e-46
 Identities = 88/225 (39%), Positives = 138/225 (61%), Gaps = 3/225 (1%)
 Frame = -3

Query: 672 ESRGRHKGN---DRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKV 502
           E RG  K     +RD+ K ++      +C+YC+  GH+ K C + K+D   Q K  +KK 
Sbjct: 66  EKRGXSKSRGPKNRDRSKSKTNKXANVECHYCHLKGHIKKYCRQLKRDM-KQGKVKEKKN 124

Query: 501 DSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHATPNKEFFSTYKM 322
           D+  E+D  AT   D  +V  S    + ++ A  +  WVIDS AS HATP K+FF++Y  
Sbjct: 125 DNGGEDDQVATTTSDFLIVYDS----DVVNFACQETSWVIDSGASIHATPRKDFFTSYTS 180

Query: 321 GDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLISGVELDRQGYVS 142
           GDFG+V+ GN+  A  +G+GDV + T+ G  LTLK+V+H+PD+R+NLIS  +LD +G+ +
Sbjct: 181 GDFGSVRMGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFXN 240

Query: 141 CFGNERWKLTKRSLVVARGAISGNLYKTRVKVCSAGLTTAKDESS 7
            F + +WKLT+ S+ +A+G  S +LY  + +V  + +    D+S+
Sbjct: 241 TFRDSQWKLTRGSMXIAKGNKSSSLYLMQARVIDSSINAVDDDST 285


>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
          Length = 788

 Score =  170 bits (431), Expect = 4e-45
 Identities = 89/224 (39%), Positives = 136/224 (60%), Gaps = 6/224 (2%)
 Frame = -3

Query: 699 AESSQALAVESRGRHKGN------DRDKGKGRSKSRDPRKCYYCNKPGHVIKDCYKRKQD 538
           + +++AL  E RGR K        + DK +G+SKS+   KC YC+KPGH+ ++C K K++
Sbjct: 60  SSNTEALVTERRGRSKSRKPSSDYNCDKSRGKSKSQKDIKCLYCDKPGHIKRECRKFKRE 119

Query: 537 EGDQKKTNQKKVDSDNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDADWVIDSAASFHA 358
           +  +K   QK      ++   A V  +GD + +  +   C+++A  D+ WV+D+  SFH 
Sbjct: 120 QFKRKGEEQK------DDKDIAAVASNGDTINIVCDDA-CVNLACQDSTWVVDTTTSFHI 172

Query: 357 TPNKEFFSTYKMGDFGTVKFGNNNKASIVGVGDVCIRTNTGYTLTLKDVRHVPDLRLNLI 178
           T  ++FFS+Y  G FG VK GN  K  I+G+ DV + T+    L LKDV+HV ++R +LI
Sbjct: 173 TARRDFFSSYTSGSFGWVKMGNEAKCEIIGMRDVELETSIACKLVLKDVKHVLEMRFSLI 232

Query: 177 SGVELDRQGYVSCFGNERWKLTKRSLVVARGAISGNLYKTRVKV 46
           S  +LD +GY S  G  +WKLTK SL++ARG  +  LYKT  ++
Sbjct: 233 SVGKLDDEGYHSHLGKGKWKLTKGSLLLARGKKNNTLYKTEARL 276