BLASTX nr result

ID: Rehmannia29_contig00027554 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00027554
         (486 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080181.1| CLAVATA3/ESR (CLE)-related protein TDIF [Ses...    56   9e-07
gb|PIN03171.1| hypothetical protein CDL12_24310 [Handroanthus im...    54   2e-06

>ref|XP_011080181.1| CLAVATA3/ESR (CLE)-related protein TDIF [Sesamum indicum]
          Length = 147

 Score = 55.8 bits (133), Expect = 9e-07
 Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 14/69 (20%)
 Frame = -3

Query: 340 ASSFVPSHDQTLFSSHASA---------EKMGNQRGSESKGKKD-----QRFEASDHEVP 203
           ASS +P H+ TLFS   +A         +K  N   S+ KG KD     ++FEASDHEVP
Sbjct: 80  ASSALPPHE-TLFSGERAAAKTVDFQPRKKASNPHASKPKGYKDDDGDRRQFEASDHEVP 138

Query: 202 SGPNPISNK 176
           SGPNPISN+
Sbjct: 139 SGPNPISNR 147


>gb|PIN03171.1| hypothetical protein CDL12_24310 [Handroanthus impetiginosus]
          Length = 115

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 39/74 (52%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -3

Query: 394 ALVNXXXXXXXXXXXXDMASSFVPSHDQTLFSS-HASAEKMGNQRGSESKGKKDQRFEAS 218
           ALVN            DMAS  +PSH QT   +      K GN R   SKGK D RF AS
Sbjct: 47  ALVNSSSSEDFSKPSSDMAS-VLPSHHQTTAKTVEFHPRKRGNPR---SKGK-DPRFGAS 101

Query: 217 DHEVPSGPNPISNK 176
           DHEVPSGPNPISN+
Sbjct: 102 DHEVPSGPNPISNR 115


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