BLASTX nr result

ID: Rehmannia29_contig00027396 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00027396
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN26934.1| hypothetical protein CDL12_00291 [Handroanthus im...    60   1e-07
ref|XP_011072452.1| protein CHUP1, chloroplastic [Sesamum indicum]     59   2e-07
gb|PIN17098.1| hypothetical protein CDL12_10239 [Handroanthus im...    59   2e-07

>gb|PIN26934.1| hypothetical protein CDL12_00291 [Handroanthus impetiginosus]
          Length = 566

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -3

Query: 185 MAVKEKRDNPITPVLFKFGVVLAFSLGGIVYTFFRN 78
           M VKEKR++P+ PVLFKFGV LAFSLGGIVY+ FR+
Sbjct: 1   MVVKEKRESPVGPVLFKFGVALAFSLGGIVYSLFRS 36


>ref|XP_011072452.1| protein CHUP1, chloroplastic [Sesamum indicum]
          Length = 630

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -3

Query: 185 MAVKEKRDNPITPVLFKFGVVLAFSLGGIVYTFFRN 78
           M VKEKR++PI+PVL K G  LAFSLGGIVYTFFR+
Sbjct: 1   MGVKEKRESPISPVLLKLGAALAFSLGGIVYTFFRS 36


>gb|PIN17098.1| hypothetical protein CDL12_10239 [Handroanthus impetiginosus]
          Length = 566

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = -3

Query: 185 MAVKEKRDNPITPVLFKFGVVLAFSLGGIVYTFFRN 78
           M +KEKR++P+ PVLFKFGV LAFSLGGIVY+ FR+
Sbjct: 1   MGLKEKRESPVGPVLFKFGVALAFSLGGIVYSLFRS 36


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