BLASTX nr result
ID: Rehmannia29_contig00027374
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00027374
(1440 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012848877.1| PREDICTED: DNA mismatch repair protein MSH5 ... 100 3e-25
ref|XP_020554165.1| DNA mismatch repair protein MSH5 isoform X1 ... 98 2e-24
ref|XP_020554167.1| DNA mismatch repair protein MSH5 isoform X3 ... 98 2e-24
ref|XP_022879981.1| DNA mismatch repair protein MSH5 isoform X1 ... 90 5e-20
ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5 ... 91 5e-20
ref|XP_022879982.1| DNA mismatch repair protein MSH5 isoform X2 ... 90 5e-20
gb|ESR65641.1| hypothetical protein CICLE_v10010304mg [Citrus cl... 91 5e-20
dbj|GAY46454.1| hypothetical protein CUMW_097210 [Citrus unshiu] 91 5e-20
gb|KDO62059.1| hypothetical protein CISIN_1g043119mg [Citrus sin... 91 5e-20
ref|XP_022879983.1| DNA mismatch repair protein MSH5 isoform X3 ... 90 5e-20
ref|XP_022879984.1| DNA mismatch repair protein MSH5 isoform X4 ... 90 5e-20
ref|XP_021905823.1| LOW QUALITY PROTEIN: DNA mismatch repair pro... 89 4e-19
ref|XP_019073017.1| PREDICTED: DNA mismatch repair protein MSH5 ... 86 8e-19
ref|XP_010644463.1| PREDICTED: DNA mismatch repair protein MSH5 ... 86 8e-19
ref|XP_019073019.1| PREDICTED: DNA mismatch repair protein MSH5 ... 86 8e-19
ref|XP_019073020.1| PREDICTED: DNA mismatch repair protein MSH5 ... 86 8e-19
ref|XP_023874875.1| DNA mismatch repair protein MSH5 [Quercus su... 87 8e-19
gb|POE83008.1| dna mismatch repair protein msh5 [Quercus suber] 87 8e-19
ref|XP_019073021.1| PREDICTED: DNA mismatch repair protein MSH5 ... 86 8e-19
ref|XP_019073026.1| PREDICTED: DNA mismatch repair protein MSH5 ... 86 8e-19
>ref|XP_012848877.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X1 [Erythranthe
guttata]
Length = 813
Score = 99.8 bits (247), Expect(2) = 3e-25
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
+V +VKYQAQPCII+TSTKSE SFLAALQ N GT EAPTVKLVKSSLFSYEQAWHR
Sbjct: 51 LVEMVKYQAQPCIIYTSTKSEESFLAALQKNDGTAEAPTVKLVKSSLFSYEQAWHR 106
Score = 45.8 bits (107), Expect(2) = 3e-25
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLEFWEDDNE+FPLVEM
Sbjct: 35 QLHVLEFWEDDNENFPLVEM 54
>ref|XP_020554165.1| DNA mismatch repair protein MSH5 isoform X1 [Sesamum indicum]
Length = 809
Score = 98.2 bits (243), Expect(2) = 2e-24
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
+V +VKYQAQPCII+TSTK E SFLAALQNN G EAPTVKLVKSSLFSYEQAWHR
Sbjct: 51 LVEMVKYQAQPCIIYTSTKCEQSFLAALQNNDGNAEAPTVKLVKSSLFSYEQAWHR 106
Score = 45.1 bits (105), Expect(2) = 2e-24
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLEFWED NEDFPLVEM
Sbjct: 35 QLHVLEFWEDGNEDFPLVEM 54
>ref|XP_020554167.1| DNA mismatch repair protein MSH5 isoform X3 [Sesamum indicum]
Length = 664
Score = 98.2 bits (243), Expect(2) = 2e-24
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
+V +VKYQAQPCII+TSTK E SFLAALQNN G EAPTVKLVKSSLFSYEQAWHR
Sbjct: 51 LVEMVKYQAQPCIIYTSTKCEQSFLAALQNNDGNAEAPTVKLVKSSLFSYEQAWHR 106
Score = 45.1 bits (105), Expect(2) = 2e-24
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLEFWED NEDFPLVEM
Sbjct: 35 QLHVLEFWEDGNEDFPLVEM 54
>ref|XP_022879981.1| DNA mismatch repair protein MSH5 isoform X1 [Olea europaea var.
sylvestris]
Length = 831
Score = 89.7 bits (221), Expect(2) = 5e-20
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR*T 315
++++VKYQA+P I+TSTKSE SFLAALQ + GT EAPTVKLVKSSLFSYEQAWHR T
Sbjct: 51 LIDMVKYQAKPFTIYTSTKSEESFLAALQRSDGTSEAPTVKLVKSSLFSYEQAWHRLT 108
Score = 38.5 bits (88), Expect(2) = 5e-20
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLEFWED +EDF L++M
Sbjct: 35 QLHVLEFWEDGSEDFQLIDM 54
>ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5 [Citrus sinensis]
ref|XP_006452401.2| DNA mismatch repair protein MSH5 [Citrus clementina]
Length = 811
Score = 90.5 bits (223), Expect(2) = 5e-20
Identities = 42/56 (75%), Positives = 51/56 (91%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
++++VKYQAQP II+TSTKSE SFL+AL+ + GT EAPTVKLVKSS+FSYEQAWHR
Sbjct: 53 LIDIVKYQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHR 108
Score = 37.7 bits (86), Expect(2) = 5e-20
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLE WED N DFPL+++
Sbjct: 37 QLHVLEVWEDSNSDFPLIDI 56
>ref|XP_022879982.1| DNA mismatch repair protein MSH5 isoform X2 [Olea europaea var.
sylvestris]
Length = 805
Score = 89.7 bits (221), Expect(2) = 5e-20
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR*T 315
++++VKYQA+P I+TSTKSE SFLAALQ + GT EAPTVKLVKSSLFSYEQAWHR T
Sbjct: 51 LIDMVKYQAKPFTIYTSTKSEESFLAALQRSDGTSEAPTVKLVKSSLFSYEQAWHRLT 108
Score = 38.5 bits (88), Expect(2) = 5e-20
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLEFWED +EDF L++M
Sbjct: 35 QLHVLEFWEDGSEDFQLIDM 54
>gb|ESR65641.1| hypothetical protein CICLE_v10010304mg [Citrus clementina]
Length = 799
Score = 90.5 bits (223), Expect(2) = 5e-20
Identities = 42/56 (75%), Positives = 51/56 (91%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
++++VKYQAQP II+TSTKSE SFL+AL+ + GT EAPTVKLVKSS+FSYEQAWHR
Sbjct: 41 LIDIVKYQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHR 96
Score = 37.7 bits (86), Expect(2) = 5e-20
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLE WED N DFPL+++
Sbjct: 25 QLHVLEVWEDSNSDFPLIDI 44
>dbj|GAY46454.1| hypothetical protein CUMW_097210 [Citrus unshiu]
Length = 797
Score = 90.5 bits (223), Expect(2) = 5e-20
Identities = 42/56 (75%), Positives = 51/56 (91%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
++++VKYQAQP II+TSTKSE SFL+AL+ + GT EAPTVKLVKSS+FSYEQAWHR
Sbjct: 41 LIDIVKYQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHR 96
Score = 37.7 bits (86), Expect(2) = 5e-20
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLE WED N DFPL+++
Sbjct: 25 QLHVLEVWEDSNSDFPLIDI 44
>gb|KDO62059.1| hypothetical protein CISIN_1g043119mg [Citrus sinensis]
Length = 792
Score = 90.5 bits (223), Expect(2) = 5e-20
Identities = 42/56 (75%), Positives = 51/56 (91%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
++++VKYQAQP II+TSTKSE SFL+AL+ + GT EAPTVKLVKSS+FSYEQAWHR
Sbjct: 41 LIDIVKYQAQPQIIYTSTKSEESFLSALKRSDGTTEAPTVKLVKSSIFSYEQAWHR 96
Score = 37.7 bits (86), Expect(2) = 5e-20
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLE WED N DFPL+++
Sbjct: 25 QLHVLEVWEDSNSDFPLIDI 44
>ref|XP_022879983.1| DNA mismatch repair protein MSH5 isoform X3 [Olea europaea var.
sylvestris]
Length = 786
Score = 89.7 bits (221), Expect(2) = 5e-20
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR*T 315
++++VKYQA+P I+TSTKSE SFLAALQ + GT EAPTVKLVKSSLFSYEQAWHR T
Sbjct: 51 LIDMVKYQAKPFTIYTSTKSEESFLAALQRSDGTSEAPTVKLVKSSLFSYEQAWHRLT 108
Score = 38.5 bits (88), Expect(2) = 5e-20
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLEFWED +EDF L++M
Sbjct: 35 QLHVLEFWEDGSEDFQLIDM 54
>ref|XP_022879984.1| DNA mismatch repair protein MSH5 isoform X4 [Olea europaea var.
sylvestris]
Length = 743
Score = 89.7 bits (221), Expect(2) = 5e-20
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR*T 315
++++VKYQA+P I+TSTKSE SFLAALQ + GT EAPTVKLVKSSLFSYEQAWHR T
Sbjct: 51 LIDMVKYQAKPFTIYTSTKSEESFLAALQRSDGTSEAPTVKLVKSSLFSYEQAWHRLT 108
Score = 38.5 bits (88), Expect(2) = 5e-20
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLEFWED +EDF L++M
Sbjct: 35 QLHVLEFWEDGSEDFQLIDM 54
>ref|XP_021905823.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MSH5 [Carica
papaya]
Length = 806
Score = 89.0 bits (219), Expect(2) = 4e-19
Identities = 40/58 (68%), Positives = 52/58 (89%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR*T 315
++++VKYQA+P II+TSTKSE SFL+A++ N GT+EAP VKLVKS++FSYEQAWHR T
Sbjct: 51 LIDLVKYQAKPLIIYTSTKSEESFLSAIERNDGTIEAPNVKLVKSTIFSYEQAWHRLT 108
Score = 36.2 bits (82), Expect(2) = 4e-19
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLE WED + DFPL+++
Sbjct: 35 QLHVLEVWEDSSSDFPLIDL 54
>ref|XP_019073017.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X1 [Vitis
vinifera]
Length = 873
Score = 85.5 bits (210), Expect(2) = 8e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 139 LIVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
L VNV KYQA+P II+TSTK E SFL+ALQ + GT EAPTVKL+KSS+FSYEQAWHR
Sbjct: 60 LFVNV-KYQAKPLIIYTSTKCEDSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAWHR 115
Score = 38.5 bits (88), Expect(2) = 8e-19
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEMGT*NQNLEVACLYL 104
QLHVLE WED + DFPL+++G +CL++
Sbjct: 35 QLHVLEVWEDGSSDFPLIDLG------RTSCLFV 62
>ref|XP_010644463.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X2 [Vitis
vinifera]
Length = 872
Score = 85.5 bits (210), Expect(2) = 8e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 139 LIVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
L VNV KYQA+P II+TSTK E SFL+ALQ + GT EAPTVKL+KSS+FSYEQAWHR
Sbjct: 60 LFVNV-KYQAKPLIIYTSTKCEDSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAWHR 115
Score = 38.5 bits (88), Expect(2) = 8e-19
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEMGT*NQNLEVACLYL 104
QLHVLE WED + DFPL+++G +CL++
Sbjct: 35 QLHVLEVWEDGSSDFPLIDLG------RTSCLFV 62
>ref|XP_019073019.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X5 [Vitis
vinifera]
Length = 847
Score = 85.5 bits (210), Expect(2) = 8e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 139 LIVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
L VNV KYQA+P II+TSTK E SFL+ALQ + GT EAPTVKL+KSS+FSYEQAWHR
Sbjct: 60 LFVNV-KYQAKPLIIYTSTKCEDSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAWHR 115
Score = 38.5 bits (88), Expect(2) = 8e-19
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEMGT*NQNLEVACLYL 104
QLHVLE WED + DFPL+++G +CL++
Sbjct: 35 QLHVLEVWEDGSSDFPLIDLG------RTSCLFV 62
>ref|XP_019073020.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X6 [Vitis
vinifera]
Length = 817
Score = 85.5 bits (210), Expect(2) = 8e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 139 LIVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
L VNV KYQA+P II+TSTK E SFL+ALQ + GT EAPTVKL+KSS+FSYEQAWHR
Sbjct: 60 LFVNV-KYQAKPLIIYTSTKCEDSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAWHR 115
Score = 38.5 bits (88), Expect(2) = 8e-19
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEMGT*NQNLEVACLYL 104
QLHVLE WED + DFPL+++G +CL++
Sbjct: 35 QLHVLEVWEDGSSDFPLIDLG------RTSCLFV 62
>ref|XP_023874875.1| DNA mismatch repair protein MSH5 [Quercus suber]
Length = 803
Score = 87.4 bits (215), Expect(2) = 8e-19
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
+V++VKYQA+P II+TSTKSE SFL ALQ + T EAPTVKLVKSS+FSYEQAWHR
Sbjct: 51 LVDLVKYQAKPVIIYTSTKSEDSFLCALQRSDETTEAPTVKLVKSSIFSYEQAWHR 106
Score = 36.6 bits (83), Expect(2) = 8e-19
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLE WED ++DFPLV++
Sbjct: 35 QLHVLEVWEDGSKDFPLVDL 54
>gb|POE83008.1| dna mismatch repair protein msh5 [Quercus suber]
Length = 800
Score = 87.4 bits (215), Expect(2) = 8e-19
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = +1
Query: 142 IVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
+V++VKYQA+P II+TSTKSE SFL ALQ + T EAPTVKLVKSS+FSYEQAWHR
Sbjct: 51 LVDLVKYQAKPVIIYTSTKSEDSFLCALQRSDETTEAPTVKLVKSSIFSYEQAWHR 106
Score = 36.6 bits (83), Expect(2) = 8e-19
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEM 62
QLHVLE WED ++DFPLV++
Sbjct: 35 QLHVLEVWEDGSKDFPLVDL 54
>ref|XP_019073021.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X8 [Vitis
vinifera]
ref|XP_019073022.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X8 [Vitis
vinifera]
Length = 773
Score = 85.5 bits (210), Expect(2) = 8e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 139 LIVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
L VNV KYQA+P II+TSTK E SFL+ALQ + GT EAPTVKL+KSS+FSYEQAWHR
Sbjct: 60 LFVNV-KYQAKPLIIYTSTKCEDSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAWHR 115
Score = 38.5 bits (88), Expect(2) = 8e-19
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEMGT*NQNLEVACLYL 104
QLHVLE WED + DFPL+++G +CL++
Sbjct: 35 QLHVLEVWEDGSSDFPLIDLG------RTSCLFV 62
>ref|XP_019073026.1| PREDICTED: DNA mismatch repair protein MSH5 isoform X10 [Vitis
vinifera]
Length = 648
Score = 85.5 bits (210), Expect(2) = 8e-19
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1
Query: 139 LIVNVVKYQAQPCIIFTSTKSEPSFLAALQNNAGTVEAPTVKLVKSSLFSYEQAWHR 309
L VNV KYQA+P II+TSTK E SFL+ALQ + GT EAPTVKL+KSS+FSYEQAWHR
Sbjct: 60 LFVNV-KYQAKPLIIYTSTKCEDSFLSALQRSDGTTEAPTVKLMKSSIFSYEQAWHR 115
Score = 38.5 bits (88), Expect(2) = 8e-19
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 3 QLHVLEFWEDDNEDFPLVEMGT*NQNLEVACLYL 104
QLHVLE WED + DFPL+++G +CL++
Sbjct: 35 QLHVLEVWEDGSSDFPLIDLG------RTSCLFV 62