BLASTX nr result

ID: Rehmannia29_contig00027320 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00027320
         (776 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF51216.1| conserved hypothetical protein [Ricinus communis]      118   1e-27

>gb|EEF51216.1| conserved hypothetical protein [Ricinus communis]
          Length = 358

 Score =  118 bits (296), Expect = 1e-27
 Identities = 64/191 (33%), Positives = 115/191 (60%), Gaps = 12/191 (6%)
 Frame = -1

Query: 569 EEKTTRVLYNFSLTTRLGHLPISSTDVIVDLLPLNFRIEEYYHA------LSLSSNHFLV 408
           E ++  V Y ++  T LG L  + T+  +D    +  + E ++A       S + ++FL 
Sbjct: 2   ENRSVDVTYEYNSYTLLGVLHDTGTEFTLD----DDTVGEEWNAGTSSITFSFTHDNFLR 57

Query: 407 CEFIDDLEKAVVYQRFDQTIREYVDHLKNKKINPVMKFTVPCSRLTP------YNYMPKE 246
           C  ID + K ++++R+D T++E+++HLK + INP+ ++ +P  R  P       NY+P E
Sbjct: 58  CYIIDRISKNILHERYDLTLQEWINHLKRETINPIARYPIP-HRQGPTIPSHTANYVPNE 116

Query: 245 YRTLVKSMIEFIVELHLNNDKSLRNFSLDNMVIKHGILKFWKLRFLPATEHRRKADFRCL 66
           YR L+KSM+ F+V++H +   S   F + N+VIK+ ++KFWK++F+ A+   +  DF CL
Sbjct: 117 YRKLIKSMVTFVVDIH-DAGYSTAGFGMPNIVIKNEVVKFWKVQFITASMGSKNNDFICL 175

Query: 65  ERVIKKLFANK 33
            RV++ LF+ +
Sbjct: 176 HRVVESLFSGE 186


Top