BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00027231
         (660 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN21218.1| DNA topoisomerase [Handroanthus impetiginosus]          56   1e-06
gb|PIN20593.1| DNA-(apurinic or apyrimidinic site) lyase [Handro...    54   8e-06

>gb|PIN21218.1| DNA topoisomerase [Handroanthus impetiginosus]
          Length = 121

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 22/37 (59%), Positives = 26/37 (70%)
 Frame = +3

Query: 489 MSHVTGFVECYCGRTAVIRTAWTTENPGRRFQSCRDY 599
           MS + G   C+CGR A +RT+WT ENPGRRF SC  Y
Sbjct: 1   MSSIEGSTYCHCGRRATLRTSWTKENPGRRFHSCHSY 37


>gb|PIN20593.1| DNA-(apurinic or apyrimidinic site) lyase [Handroanthus
           impetiginosus]
          Length = 110

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 19/31 (61%), Positives = 27/31 (87%)
 Frame = +3

Query: 498 VTGFVECYCGRTAVIRTAWTTENPGRRFQSC 590
           +T  ++CYCGRTAV++T+WT  NPGRRF++C
Sbjct: 9   LTRDIQCYCGRTAVLKTSWTNNNPGRRFRTC 39